Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20horridus_20[genbank_20GCA_5F001625485.1_202016-04-21] 186,068 sequences; 1,520,334,138 total letters Query= NC_025247.1 Length=1783 Score E Sequences producing significant alignments: (Bits) Value seq8418 91.5 2e-15 >seq8418 Length=44511 Score = 91.5 bits (100), Expect = 2e-15 Identities = 90/114 (79%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 612 AAAGCGCGCGGAAAGTGGTGGGATGGGTAT-GAGGGTAATGACGTCGTCGTAATGGACGA 670 ||| | || |||||||||||||| |||||| |||| || || | || || |||| || Sbjct 36120 AAACCCCGTGGAAAGTGGTGGGACGGGTATACAGGGCAA-GAGATTGTTATATTGGATGA 36178 Query 671 CTTTTATGGGTGGTTACCGTACGATGATTTGTTGAGAATTTGTGACCGATACCC 724 |||||||||||| |||| | ||||| ||||| ||||||||||| ||||||| Sbjct 36179 TTTTTATGGGTGGCTACCATTTGATGAATTGTTAAGAATTTGTGATAGATACCC 36232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5585735280312