Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20horridus_20[genbank_20GCA_5F001625485.1_202016-04-21] 186,068 sequences; 1,520,334,138 total letters Query= NC_026266.1 Length=2309 Score E Sequences producing significant alignments: (Bits) Value seq15089 77.0 5e-11 >seq15089 Length=55194 Score = 77.0 bits (84), Expect = 5e-11 Identities = 143/210 (68%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 714 GTACCGGAAAGTACGAGGACCTTGGTGGAATGGATATGAACAACAACAGTCAGTAATCAT 773 |||| ||||| ||| ||| |||||| ||||||| |||| || || || | Sbjct 21800 GTACTGGAAACCACGGGGAAAGTGGTGGGATGGATACACTGGACAAGAGATTGTGATATT 21741 Query 774 TGATGATTTTTATGGATGGGTACCCTTTGATGAACTGTTAAGGGTTGCTGATAGATATCA 833 ||||||| |||||| ||| | |||||||||||| ||||||| | ||||||||||| Sbjct 21740 GGATGATTATTATGGTTGGCTCCCCTTTGATGAATTGTTAAGATTGTGTGATAGATATCC 21681 Query 834 ACATCAAGTTGAAATTAAGGGAGGCTTTGAAGAGTTTAACTCTAAGATTATTATTATAAC 893 | ||| || | ||| || || | |||||| || |||| ||| ||| || Sbjct 21680 CTACAGAGTGGAGACTAAAGGGGGAACTATTGAGTTTGTGTCCAAGACCATTTATATCAC 21621 Query 894 TAGTAATAGGCCAATTAAGGATTGGTATAA 923 | || | || ||||||| |||||||| Sbjct 21620 TTCAAACAAACCTGTTAAGGAATGGTATAA 21591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7265607640200