Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_001792.2 Length=1758 Score E Sequences producing significant alignments: (Bits) Value seq192303 89.7 6e-15 SEQ24207 80.6 3e-12 >seq192303 Length=6807 Score = 89.7 bits (98), Expect = 6e-15 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 646 AAGTGGTGGGATGGATATCATGGAGAAGAAGTTGTTGTTTTGGATGATTTTTATGGCTGG 705 ||||||||||||||||| |||| |||| |||| | |||||||||| |||||| ||| Sbjct 181 AAGTGGTGGGATGGATACACTGGACAAGAGATTGTGATATTGGATGATTATTATGGTTGG 240 Query 706 TTACCTTGGGATGATCTACTGAGACTGTGTGACCGGTATCCATTGACTGTAGAGACTAAA 765 | || | ||||| | | ||| ||||||| | ||||| | | || ||||||||| Sbjct 241 CTCCCCTTTGATGAATTGTTAAGATTGTGTGATAGATATCCCTACAGAGTGGAGACTAAA 300 Query 766 GGCGGTACTGTT 777 || || |||||| Sbjct 301 GGGGGAACTGTT 312 >SEQ24207 Length=10468 Score = 80.6 bits (88), Expect = 3e-12 Identities = 111/155 (72%), Gaps = 3/155 (2%) Strand=Plus/Plus Query 619 GACACCTACTGGAAGCCTAGTAGAAATAAGTGGTGGGATGGATATCATGGAGAAGAAGTT 678 |||| |||||||| || | |||| |||||||||||| ||| |||| |||| || Sbjct 6714 GACAAATACTGGAAACCCCATGGAAA---GTGGTGGGATGGGTATACTGGACAAGAGATT 6770 Query 679 GTTGTTTTGGATGATTTTTATGGCTGGTTACCTTGGGATGATCTACTGAGACTGTGTGAC 738 ||| | ||||||||||||||||| ||| |||| | ||||| | | ||| | ||||| Sbjct 6771 GTTATATTGGATGATTTTTATGGATGGATACCATTTGATGAATTGTTAAGAATTTGTGAT 6830 Query 739 CGGTATCCATTGACTGTAGAGACTAAAGGCGGTAC 773 | || | | | || ||||| || || ||||| Sbjct 6831 AGATACTCTTACAGAGTTGAGACGAAGGGTGGTAC 6865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5489052357920