Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01]
473,380 sequences; 1,126,791,715 total letters
Query= NC_003054.1
Length=1821
Score E
Sequences producing significant alignments: (Bits) Value
seq9165 100 3e-18
SEQ24207 84.2 2e-13
>seq9165
Length=10910
Score = 100 bits (110), Expect = 3e-18
Identities = 114/153 (75%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 623 GTGAAAAGTATTATAAATCTCGCGGGAAGTGGTGGGATGGCTATAATGGGCAGGATGTGG 682
|||| || |||| ||| | || || ||||||||||| || |||| ||||| || | |
Sbjct 2690 GTGACAAATATTGGAAACCCCGTGGAAAGTGGTGGGACGGGTATACAGGGCAAGAGATTG 2749
Query 683 TTGTCATGGATGATTTTTATGGGTGGCTGCCTTACGATGACCTTTTAAGGATCTGTGATC 742
|| | |||||||||||||||||||||| || | ||| | | ||||| || ||||||
Sbjct 2750 TTATATTGGATGATTTTTATGGGTGGCTACCATTTGATAAATTGTTAAGAATTTGTGATA 2809
Query 743 GCTATCCTTTAAGGGTAGAGTACAAGGGAGGTA 775
| || |||| || || ||| |||||| ||||
Sbjct 2810 GATACCCTTATAGAGTTGAGACCAAGGGTGGTA 2842
>SEQ24207
Length=10468
Score = 84.2 bits (92), Expect = 2e-13
Identities = 123/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 623 GTGAAAAGTATTATAAATCTCGCGGGAAGTGGTGGGATGGCTATAATGGGCAGGATGTGG 682
|||| || || | ||| | | || |||||||||||||| |||| ||| || || | |
Sbjct 6712 GTGACAAATACTGGAAACCCCATGGAAAGTGGTGGGATGGGTATACTGGACAAGAGATTG 6771
Query 683 TTGTCATGGATGATTTTTATGGGTGGCTGCCTTACGATGACCTTTTAAGGATCTGTGATC 742
|| | |||||||||||||||| ||| | || | ||||| | ||||| || ||||||
Sbjct 6772 TTATATTGGATGATTTTTATGGATGGATACCATTTGATGAATTGTTAAGAATTTGTGATA 6831
Query 743 GCTATCCTTTAAGGGTAGAGTACAAGGGAGGTATGACCCAGTTCGTTGCTAAGA 796
| || ||| || || ||| ||||| |||| | | || ||| ||||||
Sbjct 6832 GATACTCTTACAGAGTTGAGACGAAGGGTGGTACAATGGAATTTGTTTCTAAGA 6885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5689638377960
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |