Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_005148.1 Length=1768 Score E Sequences producing significant alignments: (Bits) Value seq192303 91.5 2e-15 >seq192303 Length=6807 Score = 91.5 bits (100), Expect = 2e-15 Identities = 114/153 (75%), Gaps = 5/153 (3%) Strand=Plus/Plus Query 630 TACTGGAAACCACCTAGAAACAAGTGGTGGGACGGTTACCATGGTGAAGAAGTGGTTGTT 689 ||||||||||| | |||| ||||||||| || ||| ||| |||| | | || | Sbjct 163 TACTGGAAACCGCGGGGAAA---GTGGTGGGATGGATACACTGGACAAGAGATTG-TGAT 218 Query 690 ATT-GATGACTTTTATGGCTGGCTGCCGTGGGATGATCTACTGAGATTGTGTGATCGATA 748 ||| ||||| | |||||| ||||| || | ||||| | | |||||||||||| |||| Sbjct 219 ATTGGATGATTATTATGGTTGGCTCCCCTTTGATGAATTGTTAAGATTGTGTGATAGATA 278 Query 749 TCCATTGACTGTAGAGACTAAAGGTGGAACTGT 781 ||| | | || ||||||||||| |||||||| Sbjct 279 TCCCTACAGAGTGGAGACTAAAGGGGGAACTGT 311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5520891408720