Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_015399.1 Length=1957 Score E Sequences producing significant alignments: (Bits) Value seq192303 109 7e-21 SEQ24207 84.2 3e-13 >seq192303 Length=6807 Score = 109 bits (120), Expect = 7e-21 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 662 GTACTATAAGCCTCGCGGTATGTGGTGGGATGGATACGATGGACAAGAGAATGTAATTGT 721 ||||| || || || || | |||||||||||||||| ||||||||||| ||| || | Sbjct 162 GTACTGGAAACCGCGGGGAAAGTGGTGGGATGGATACACTGGACAAGAGATTGTGATATT 221 Query 722 CGATGACTTTTACGGCTGGATGCCATGTGATGAACTGTTGAGAGTGTTTGATCGATATCC 781 ||||| | ||| || ||| | || | ||||||| |||| ||| ||| |||| ||||||| Sbjct 222 GGATGATTATTATGGTTGGCTCCCCTTTGATGAATTGTTAAGATTGTGTGATAGATATCC 281 Query 782 TTGTAAAGTACCGGTAAAAGGAGCCTATGTGGAATTTGTGTCAACTAATATATATGTGAC 841 | | ||| | ||||| | ||| || |||||||| | | || ||| | || Sbjct 282 CTACAGAGTGGAGACTAAAGGGGGAACTGTTGAGTTTGTGTCTAAGACCATTTATATCAC 341 Query 842 GTCTAACAAGCATGTGTGGCAATGGTATAA 871 || ||||| | ||| | |||||||||| Sbjct 342 TTCAAACAAACCTGTTAAGGAATGGTATAA 371 >SEQ24207 Length=10468 Score = 84.2 bits (92), Expect = 3e-13 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 683 GTGGTGGGATGGATACGATGGACAAGAGAATGTAATTGTCGATGACTTTTACGGCTGGAT 742 |||||||||||| || ||||||||||| ||| || | ||||| ||||| || ||||| Sbjct 6740 GTGGTGGGATGGGTATACTGGACAAGAGATTGTTATATTGGATGATTTTTATGGATGGAT 6799 Query 743 GCCATGTGATGAACTGTTGAGAGTGTTTGATCGATA 778 |||| ||||||| |||| ||| | | |||| |||| Sbjct 6800 ACCATTTGATGAATTGTTAAGAATTTGTGATAGATA 6835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6122649468840