Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_021206.1 Length=1798 Score E Sequences producing significant alignments: (Bits) Value seq192303 134 2e-28 SEQ24207 107 2e-20 seq9165 96.9 4e-17 >seq192303 Length=6807 Score = 134 bits (148), Expect = 2e-28 Identities = 122/154 (79%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 629 AAATGGTGGGATGGATATTGTGGACAAGAAGTAGTAATATTGGATGACTTTTATGGCTGG 688 || |||||||||||||| ||||||||| | || ||||||||||| | |||||| ||| Sbjct 181 AAGTGGTGGGATGGATACACTGGACAAGAGATTGTGATATTGGATGATTATTATGGTTGG 240 Query 689 CTTCCATATGATGAAATGTTAAGACTGTGTGATAGGTATCCACTTACAGTGGAAACTAAA 748 || || | ||||||| |||||||| |||||||||| ||||| | |||||| |||||| Sbjct 241 CTCCCCTTTGATGAATTGTTAAGATTGTGTGATAGATATCCCTACAGAGTGGAGACTAAA 300 Query 749 GGTGGAACTGTTCCTTTTTTGGCCAGGACTATTT 782 || ||||||||| ||| || | | ||| |||| Sbjct 301 GGGGGAACTGTTGAGTTTGTGTCTAAGACCATTT 334 >SEQ24207 Length=10468 Score = 107 bits (118), Expect = 2e-20 Identities = 103/130 (79%), Gaps = 4/130 (3%) Strand=Plus/Plus Query 629 AAATGGTGGGATGGATATTGTGGACAAGAAGTAGTAATATTGGATGACTTTTATGGCTGG 688 || ||||||||||| ||| ||||||||| | || ||||||||||| |||||||| ||| Sbjct 6738 AAGTGGTGGGATGGGTATACTGGACAAGAGATTGTTATATTGGATGATTTTTATGGATGG 6797 Query 689 CTTCCATATGATGAAATGTTAAGACTGTGTGATAGGTATCCACTTAC--AGTGGAAACTA 746 | |||| ||||||| |||||||| | |||||||| || | ||||| ||| || || | Sbjct 6798 ATACCATTTGATGAATTGTTAAGAATTTGTGATAG--ATACTCTTACAGAGTTGAGACGA 6855 Query 747 AAGGTGGAAC 756 | ||||| || Sbjct 6856 AGGGTGGTAC 6865 >seq9165 Length=10910 Score = 96.9 bits (106), Expect = 4e-17 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 629 AAATGGTGGGATGGATATTGTGGACAAGAAGTAGTAATATTGGATGACTTTTATGGCTGG 688 || |||||||| || ||| || ||||| | || ||||||||||| |||||||| ||| Sbjct 2716 AAGTGGTGGGACGGGTATACAGGGCAAGAGATTGTTATATTGGATGATTTTTATGGGTGG 2775 Query 689 CTTCCATATGATGAAATGTTAAGACTGTGTGATAGGTATCCACTTACAGTGGAAACTAAA 748 || |||| |||| || |||||||| | |||||||| || || || ||| || || || Sbjct 2776 CTACCATTTGATAAATTGTTAAGAATTTGTGATAGATACCCTTATAGAGTTGAGACCAAG 2835 Query 749 GGTGGAAC 756 ||||| || Sbjct 2836 GGTGGTAC 2843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5616408561120