Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_026266.1 Length=2309 Score E Sequences producing significant alignments: (Bits) Value seq192303 82.4 1e-12 >seq192303 Length=6807 Score = 82.4 bits (90), Expect = 1e-12 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 714 GTACCGGAAAGTACGAGGACCTTGGTGGAATGGATATGAACAACAACAGTCAGTAATCAT 773 |||| ||||| || ||| |||||| ||||||| |||| || || || | Sbjct 162 GTACTGGAAACCGCGGGGAAAGTGGTGGGATGGATACACTGGACAAGAGATTGTGATATT 221 Query 774 TGATGATTTTTATGGATGGGTACCCTTTGATGAACTGTTAAGGGTTGCTGATAGATATCA 833 ||||||| |||||| ||| | |||||||||||| ||||||| | ||||||||||| Sbjct 222 GGATGATTATTATGGTTGGCTCCCCTTTGATGAATTGTTAAGATTGTGTGATAGATATCC 281 Query 834 ACATCAAGTTGAAATTAAGGGAGGCTTTGAAGAGTTTAACTCTAAGATTATTATTATAAC 893 | ||| || | ||| || || || |||||| ||||||| ||| ||| || Sbjct 282 CTACAGAGTGGAGACTAAAGGGGGAACTGTTGAGTTTGTGTCTAAGACCATTTATATCAC 341 Query 894 TAGTAATAGGCCAATTAAGGATTGGTATAA 923 | || | || ||||||| |||||||| Sbjct 342 TTCAAACAAACCTGTTAAGGAATGGTATAA 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7243384057000