Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20pyrrhus_20[genbank_20GCA_5F000737285.1_202014-08-01] 473,380 sequences; 1,126,791,715 total letters Query= NC_031753.1 Length=2000 Score E Sequences producing significant alignments: (Bits) Value SEQ24207 89.7 6e-15 seq9165 89.7 6e-15 >SEQ24207 Length=10468 Score = 89.7 bits (98), Expect = 6e-15 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 801 TGGTGGGATGGTTATAATGGGGAGGGTGCTGTTATTTTGGATGATTTTTATGGGTGGGTT 860 ||||||||||| |||| ||| | | |||||| ||||||||||||||||| ||| | Sbjct 6741 TGGTGGGATGGGTATACTGGACAAGAGATTGTTATATTGGATGATTTTTATGGATGGATA 6800 Query 861 CCATTTGATGAATTGCTGAGAATTGGGGACAGGTACCCT 899 ||||||||||||||| | |||||| | || || ||| || Sbjct 6801 CCATTTGATGAATTGTTAAGAATTTGTGATAGATACTCT 6839 >seq9165 Length=10910 Score = 89.7 bits (98), Expect = 6e-15 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 801 TGGTGGGATGGTTATAATGGGGAGGGTGCTGTTATTTTGGATGATTTTTATGGGTGGGTT 860 |||||||| || |||| ||| | | |||||| ||||||||||||||||||||| | Sbjct 2719 TGGTGGGACGGGTATACAGGGCAAGAGATTGTTATATTGGATGATTTTTATGGGTGGCTA 2778 Query 861 CCATTTGATGAATTGCTGAGAATTGGGGACAGGTACCCT 899 ||||||||| ||||| | |||||| | || || |||||| Sbjct 2779 CCATTTGATAAATTGTTAAGAATTTGTGATAGATACCCT 2817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6259557387280