Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cymbomonas_20tetramitiformis_20[genbank_20GCA_5F001247695.1_202015- 08-05] 40,243 sequences; 281,270,454 total letters Query= NC_026274.1 Length=4037 Score E Sequences producing significant alignments: (Bits) Value seq5971 77.0 8e-11 >seq5971 Length=10314 Score = 77.0 bits (84), Expect = 8e-11 Identities = 110/149 (74%), Gaps = 12/149 (8%) Strand=Plus/Minus Query 617 AAAGCGCGAACTGACTATCCTAATGCTTATTTGAAGTTGCCCAACAAGTGGTGGGATGGT 676 ||||| || |||||| |||||| ||||||||||||| ||||||||||||| ||| Sbjct 672 AAAGCCCGTACTGACCATCCTACTGCTTATTTGAAGAACTGCAACAAGTGGTGGTGCGGT 613 Query 677 TATCA--AGGAGAAGCTAATGTGATCATTGATGATGTTGATCCTAATCATGCTTACATG- 733 ||| | | || ||| | ||| |||||||| || | || || |||| ||||| Sbjct 612 TATGAGGACGACAAGGT--TGTTATCATTGAGGACTTCGACAAGAAGCATG---ACATGC 558 Query 734 GGATATCAC---TTAAAGATTTGGGCTGA 759 |||| ||| ||||||||||||||||| Sbjct 557 TGATA-CACTTTTTAAAGATTTGGGCTGA 530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12800763162990