Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetradesmus_20obliquus_20[genbank_20GCA_5F900108755.1_202016-11-05] 1,368 sequences; 107,715,903 total letters Query= NC_001420.2 Length=5577 Score E Sequences producing significant alignments: (Bits) Value seq1053 522 9e-145 >seq1053 Length=723 Score = 522 bits (578), Expect = 9e-145 Identities = 546/717 (76%), Gaps = 0/717 (0%) Strand=Plus/Minus Query 965 CTACATTTCCACGCAGTGCATCTTATGCGCACACTTCCTCTGGGTTCTCTGCACCCTAAC 1024 || |||||||| || ||||| ||||||| ||||||||| ||| | ||||||| Sbjct 723 CTTCATTTCCATGCGGTGCACGTTATGCGGACACTTCCTACAGGTAGCGTTTACCCTAAT 664 Query 1025 TTCGGTAAGCTGGTACGCATCAATCGGCAAATAAATAGCTTGCAAAACACGTGGCCTTAT 1084 || ||| | |||||||| || || |||||||||||||||| |||||||||||| Sbjct 663 TTTGGTCGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAAATACGTGGCCTTAT 604 Query 1085 GGTTACTCTATGCCCATCGCAGTCCGGTACTCCCAAGACGCATTCTCTCGCGCTGGCTGG 1144 |||||| ||||||||||||||| || ||| | || ||||| || || || |||| ||| Sbjct 603 GGTTACAGTATGCCCATCGCAGTTCGCTACACGCAGGACGCTTTTTCACGTTCTGGTTGG 544 Query 1145 CTCTGGCCTGTGGACTCAAAGGGTGAACCCCTTAAAGCTACCTCGTATATGGCTGTAGGC 1204 | |||| ||| || | || ||||| || |||||||||||| ||||||||||| || Sbjct 543 TTGTGGCTTGTTGATGCTAAAGGTGAGCCGCTTAAAGCTACCAGTTATATGGCTGTTGGT 484 Query 1205 TTCTACGTTGCTAAATACGTTAACAAAAAATCAGATATTGACATGGCCGTAAAAGGCCTA 1264 ||||| || ||||||||||||||||||| |||||||| ||| | || | ||||| ||| Sbjct 483 TTCTATGTGTCTAAATACGTTAACAAAAAGTCAGATATCGACCTTGCTGCTAAAGGTCTA 424 Query 1265 GGGAATAAAGAATGGAACAATTCACTCAAAACCAAAATCAACCTCATACCCAAGAAAGTG 1324 || ||||||||||||||| ||||| |||||||| | || | |||||||| || Sbjct 423 GGAGCTAAAGAATGGAACAACTCACTAAAAACCAAGCTGTCGCTACTTCCCAAGAAGCTG 364 Query 1325 TTCAGAATACGAATGTCTCGCAATTTCGGAATGAAACTGTTATCAATGGCTCACCTGTCA 1384 |||||||| ||||| ||||| ||||| |||||| || | ||||| | | ||||| Sbjct 363 TTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAATGACAAATCTGTCC 304 Query 1385 GCGGAAACCCTGATGGAACTGACCCAAGTGGGTTACGACGTGACCCCGTTCAACAACATC 1444 |||| | | || |||| ||| | |||||||||||| ||| ||||||||| | || Sbjct 303 ACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGCCGTTCAACCAGATA 244 Query 1445 TTGAAGCAGAACGCCAAGAAAGAGCTCAAATCGAGGCTGGCAAAGAAATCTGTCGCCGAC 1504 |||||||||||||| || | |||| | | || |||||||| ||| |||| |||||| Sbjct 243 TTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAAGTTACTGTAGCCGAC 184 Query 1505 GTTTTGGAGGCGCAACCTGTGACGACGAATCTGCTAAAATTCATGCGCAATTTGACCCGA 1564 ||||||| |||||||||||||||||| |||||||| ||||| |||||| || || | Sbjct 183 GTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATGCGCGCTTCGATAAAA 124 Query 1565 ACAATCGGAGCGTCCAACCTACAGAGTTTTATCGCTTCAATGACCACGAAATTAACAAGT 1624 | || || | |||||||| ||||||||||||||||| ||||| ||| |||||| | Sbjct 123 ATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATGACGCAGAAGTTAACACTT 64 Query 1625 ACGGATATTTCTGATGAAACCAAAAACTACGTTGCTTCTGCAGGAATTGCTGTTGCT 1681 |||||||||||||||| | ||||| || ||| | ||||||||| || |||| Sbjct 63 TCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCAGGAATTACTACTGCT 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17734134649040