Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Actinidia_20chinensis_20[genbank_20GCA_5F000467755.1_202013-09-16]
26,721 sequences; 604,217,145 total letters
Query= NC_028994.1
Length=4273
Score E
Sequences producing significant alignments: (Bits) Value
seq21764 109 1e-20
>seq21764
Length=4611
Score = 109 bits (120), Expect = 1e-20
Identities = 296/452 (65%), Gaps = 6/452 (1%)
Strand=Plus/Minus
Query 1195 GTACGTGCCGATCTTACATACCAGCAAGGATTGCAGCGTATGTGGAGTCGTTCAACACGA 1254
||| | |||||||| | || || ||||| | | |||||||| || |||||| ||
Sbjct 2727 GTAAGAGCCGATCTGAATTATCAACAAGGGCTCCGAAAAATGTGGAGCCGATCAACAAGA 2668
Query 1255 TACGATTTTTATTTCCCAGCATTTGCAACCTTAGGTGAACAAGCCATACTCAATAAGGAA 1314
| |||||| || | ||||| || ||| | | || ||||| || || | || || |||
Sbjct 2667 TTCGATTTCTACCTGCCAGCTTTGGCACACCTCGGAGAACAGGCAGTATTGAACAAAGAA 2608
Query 1315 ATTTATGTTACAGGTAGCTCTGGGGATAATGATGTATTTGGTTATCAAGAACGCTGGGCA 1374
|| ||||| ||| | | | ||||| || ||||| || || |||||||| ||||||
Sbjct 2607 ATCTATGTGCAAGGCACAGCAGCCGATAACGACGTATTCGGATACCAAGAACGATGGGCA 2548
Query 1375 GAATACCGATATTATCCTAGCCGCATTTCAAGTTTGTTCCGTTCTACTGCTGCTGGAACT 1434
|||||| ||||| |||| | || || || | ||| || || | ||
Sbjct 2547 GAATACAGATATCATCCAACAATGATCACAGGTCTATTCAAATCAACCTCAATCAACACA 2488
Query 1435 ATTGATGCCTGGCATCTTGCACAAAAATTCACTGCTACACCTACGTTGAATACAACGTTT 1494
|| ||| |||||| |||||| |||||| ||| || | |||| || ||
Sbjct 2487 ATCGATTTCTGGCACTACGCACAACGATTCACAAGCCTACCAACACTAAATAACACTTTC 2428
Query 1495 ATACAAGACACACC----ACC--AGTGAGTCGAGTAGTAGCAGTTGGAGCAGCTGCTAAC 1548
|| ||||| || | ||| | || ||| ||| || || || | || |||
Sbjct 2427 ATCGAAGACCCAACAAAAACCGTATTGCAACGAACCACAGCGGTCGGGGCGTCAGCAAAC 2368
Query 1549 GGACAACAATTTATTTTTGATAGCTTTTTTGATTGTAAAAAAGCACGACCAATGCCAATG 1608
||||| ||| |||| || | || || ||| ||| |||||| ||||||||||||
Sbjct 2367 GGACAGCAAATTATCGCCGACATGTTCTTCGATATCAAAGCAGCACGGCCAATGCCAATG 2308
Query 1609 TACAGCGTACCTGGCTTAATCGATCATTTCTA 1640
|| ||| || || | ||||| ||||||||
Sbjct 2307 TATTCCGTGCCAGGACTGATCGACCATTTCTA 2276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 13557636474070
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |