Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Actinidia_20chinensis_20[genbank_20GCA_5F000467755.1_202013-09-16] 26,721 sequences; 604,217,145 total letters Query= NC_028994.1 Length=4273 Score E Sequences producing significant alignments: (Bits) Value seq21764 109 1e-20 >seq21764 Length=4611 Score = 109 bits (120), Expect = 1e-20 Identities = 296/452 (65%), Gaps = 6/452 (1%) Strand=Plus/Minus Query 1195 GTACGTGCCGATCTTACATACCAGCAAGGATTGCAGCGTATGTGGAGTCGTTCAACACGA 1254 ||| | |||||||| | || || ||||| | | |||||||| || |||||| || Sbjct 2727 GTAAGAGCCGATCTGAATTATCAACAAGGGCTCCGAAAAATGTGGAGCCGATCAACAAGA 2668 Query 1255 TACGATTTTTATTTCCCAGCATTTGCAACCTTAGGTGAACAAGCCATACTCAATAAGGAA 1314 | |||||| || | ||||| || ||| | | || ||||| || || | || || ||| Sbjct 2667 TTCGATTTCTACCTGCCAGCTTTGGCACACCTCGGAGAACAGGCAGTATTGAACAAAGAA 2608 Query 1315 ATTTATGTTACAGGTAGCTCTGGGGATAATGATGTATTTGGTTATCAAGAACGCTGGGCA 1374 || ||||| ||| | | | ||||| || ||||| || || |||||||| |||||| Sbjct 2607 ATCTATGTGCAAGGCACAGCAGCCGATAACGACGTATTCGGATACCAAGAACGATGGGCA 2548 Query 1375 GAATACCGATATTATCCTAGCCGCATTTCAAGTTTGTTCCGTTCTACTGCTGCTGGAACT 1434 |||||| ||||| |||| | || || || | ||| || || | || Sbjct 2547 GAATACAGATATCATCCAACAATGATCACAGGTCTATTCAAATCAACCTCAATCAACACA 2488 Query 1435 ATTGATGCCTGGCATCTTGCACAAAAATTCACTGCTACACCTACGTTGAATACAACGTTT 1494 || ||| |||||| |||||| |||||| ||| || | |||| || || Sbjct 2487 ATCGATTTCTGGCACTACGCACAACGATTCACAAGCCTACCAACACTAAATAACACTTTC 2428 Query 1495 ATACAAGACACACC----ACC--AGTGAGTCGAGTAGTAGCAGTTGGAGCAGCTGCTAAC 1548 || ||||| || | ||| | || ||| ||| || || || | || ||| Sbjct 2427 ATCGAAGACCCAACAAAAACCGTATTGCAACGAACCACAGCGGTCGGGGCGTCAGCAAAC 2368 Query 1549 GGACAACAATTTATTTTTGATAGCTTTTTTGATTGTAAAAAAGCACGACCAATGCCAATG 1608 ||||| ||| |||| || | || || ||| ||| |||||| |||||||||||| Sbjct 2367 GGACAGCAAATTATCGCCGACATGTTCTTCGATATCAAAGCAGCACGGCCAATGCCAATG 2308 Query 1609 TACAGCGTACCTGGCTTAATCGATCATTTCTA 1640 || ||| || || | ||||| |||||||| Sbjct 2307 TATTCCGTGCCAGGACTGATCGACCATTTCTA 2276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13557636474070