Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_026264.1 Length=2906 Score E Sequences producing significant alignments: (Bits) Value seq45517 152 9e-34 >seq45517 Length=590 Score = 152 bits (168), Expect = 9e-34 Identities = 227/318 (71%), Gaps = 3/318 (1%) Strand=Plus/Plus Query 431 CATG-AAGGAGATCAAGAAGGACCACATGGTGAAGCCTGAGGAT-CAGCAGGACGTTACT 488 |||| |||||||||| ||| || ||||| ||||||| ||| ||| | ||||| ||| Sbjct 1 CATGCAAGGAGATCAGGAAAGATTTTATGGTCAAGCCTGCCGATGCAG-ATGACGTAACT 59 Query 489 GGCGAGTGGTTCTATGGGGAGCCTGGCGTCGGGAAGTCCCACCTTGCACGTGAGCAGTAC 548 || | ||||| || ||| || || || ||||| || || |||||| || | || Sbjct 60 GGTGTATGGTTTTACGGGCCACCAGGTGTTGGGAAATCGTACACTGCACGGAAGGAATAT 119 Query 549 CCTGGTGCTTACCTGAAGATGCAGAACAAGTGGTGGGACGGGTACCAGGATGAGAAGTAC 608 ||||| |||||| |||||||| |||||||||||||| || || ||||||||| | | Sbjct 120 CCTGGAGCTTACGACAAGATGCAAAACAAGTGGTGGGATGGTTATCAGGATGAGGAATTT 179 Query 609 GTCATCCTTGATGACTTTGACTGCAAGGAGCTGGGCCACCACCTGAAGATTTGGGGGGAC 668 || | |||||||| |||||| ||||||| |||| || | ||||| |||| || Sbjct 180 GTGTTGCTTGATGATTTTGACAGCAAGGAAATGGGTCATTTGTTAAAGATATGGGCTGAT 239 Query 669 AAGTACAGCTTCCTGGCAGAGACCAAGGGTGGTGCCATCTGCATCCGCCCTGAGAAGCTG 728 || ||| || || || ||||| ||||| || || | ||||| ||| |||| | Sbjct 240 CGTTATTCCTTTCTTGCTGAAACCAAAGGTGGAGCTATTAGAATCCGTCCTCGGAAGTTT 299 Query 729 ATAGTGACTAGCAACTAT 746 || | || ||||| ||| Sbjct 300 ATCATCACAAGCAATTAT 317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9160347594420