Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_026278.1
Length=2846
Score E
Sequences producing significant alignments: (Bits) Value
seq45517 165 1e-37
>seq45517
Length=590
Score = 165 bits (182), Expect = 1e-37
Identities = 192/259 (74%), Gaps = 0/259 (0%)
Strand=Plus/Minus
Query 1604 ATAATTACTTGTAATAATAAACTTTTTCGGACGAATATTAATAGCATAACCCTTAGTTTC 1663
|||||| ||||| || |||||||| ||||| || ||||||| ||| || |||||
Sbjct 317 ATAATTGCTTGTGATGATAAACTTCCGAGGACGGATTCTAATAGCTCCACCTTTGGTTTC 258
Query 1664 AGCTATAAAGGCATACTTGTCTGCCCATATTTTTAAATGATGACCTAATTGCTTGCTATC 1723
||| | ||||| ||| || |||||||| ||||| |||||| | || |||||| ||
Sbjct 257 AGCAAGAAAGGAATAACGATCAGCCCATATCTTTAACAAATGACCCATTTCCTTGCTGTC 198
Query 1724 GAAGTCATCCAAAATCACAAAATCTTCGTTTTGATAACCACACCACCACTTGTTCTGCAT 1783
|| ||||| | | |||||| || || | ||||||||| |||||||||||| |||||
Sbjct 197 AAAATCATCAAGCAACACAAATTCCTCATCCTGATAACCATCCCACCACTTGTTTTGCAT 138
Query 1784 CTTCATATAGGCTCCAGGAAATTCAGATCTTGCACGATGACTTTTGCCAACACCTGGAGG 1843
||| || ||||||||| |||| | |||| | ||| ||||||||||| ||
Sbjct 137 CTTGTCGTAAGCTCCAGGATATTCCTTCCGTGCAGTGTACGATTTCCCAACACCTGGTGG 78
Query 1844 CCCGTAATACCATATACCA 1862
||||||| |||||| ||||
Sbjct 77 CCCGTAAAACCATACACCA 59
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8968908773220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |