Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20nigra_20[genbank_20GCA_5F001682895.1_202016-07-12] 2,545 sequences; 402,144,823 total letters Query= NC_011399.1 Length=8929 Score E Sequences producing significant alignments: (Bits) Value seq1319 96.9 2e-16 >seq1319 Length=2243 Score = 96.9 bits (106), Expect = 2e-16 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 1883 TCGACTTCTCGTCCATGACGGGTGCCGTGAGCGCGACGGCCGTGGTTGCCGCGCTGGTGG 1942 ||||||||||||| |||| | | || | || |||||||| | |||||| | ||| Sbjct 688 TCGACTTCTCGTCGATGATCAGCTCGGTCAACGGCTCGGCCGTGATCGCCGCGTTCATGG 629 Query 1943 CCATGGGCGTGGTCAAGATCGGCCCGGGCTTCGCGAAGTGGGCGCTGAACAAGGTCGCGG 2002 ||||||||||||||||| |||||||| |||||| |||||| | |||||||| || | Sbjct 628 CCATGGGCGTGGTCAAGCTCGGCCCGAACTTCGCCCGCTGGGCGGTCAACAAGGTGGCCG 569 Query 2003 CGTTCTTC 2010 |||||| Sbjct 568 GCTTCTTC 561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 28456785223340