Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_023871.1 Length=2236 Score E Sequences producing significant alignments: (Bits) Value seq37548 114 2e-22 >seq37548 Length=2359 Score = 114 bits (126), Expect = 2e-22 Identities = 160/220 (73%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 1891 TGGCCGTTCGAGGCCTCCAGCGACAACGTCTCCATCCTTGATTGCGTAGTCGTAACCCTT 1950 ||| ||| |||| || || ||||||||||| ||||| |||||||| |||||||| ||| Sbjct 1876 TGGTCGTCCGAGCCCCCCCGCGACAACGTCACCATCTTTGATTGCATAGTCGTACATCTT 1817 Query 1951 CTCTGGTGTTC--CCGTAGAAGGCTGGATGTTCGGGTGACAACCGTCCACATCGAATATG 2008 | ||||| | ||| | |||||| |||||||||||| ||||||||||| ||| | Sbjct 1816 GCCCGGTGTGCGGCCGCA--AGGCTGTATGTTCGGGTGATGGCCGTCCACATCAAAT-CG 1760 Query 2009 TCAGTCTTTCGA-CTGCGAAACTTCCGTCCGAAGTCTGCGAAGCAGTGTAGGTGAAGTCC 2067 || | | || || || | || ||||| |||| ||| || |||| ||| Sbjct 1759 TCTGGGGTCTGAGGTGTAGAATCGACAACCAAAGTCAACGAACGCGTGGAGATGAACTCC 1700 Query 2068 TCCATCCTCGTGATGCTCTCTTCCAACGATGCACTCAGCT 2107 |||||| | |||| ||||| ||||| ||| ||||||||| Sbjct 1699 TCCATCAGCATGATTCTCTCGTCCAATGATACACTCAGCT 1660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7036398458748