Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_023872.1 Length=2225 Score E Sequences producing significant alignments: (Bits) Value seq37548 77.0 5e-11 >seq37548 Length=2359 Score = 77.0 bits (84), Expect = 5e-11 Identities = 102/139 (73%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 2035 AAAGAAAGCATGGAGATGAACTCCTCCAGCTTGATGATTTTCTCGTCCAATGACACACTC 2094 || ||| || |||||||||||||||||| | |||||| ||||||||||||| |||||| Sbjct 1723 AACGAACGCGTGGAGATGAACTCCTCCATCAGCATGATTCTCTCGTCCAATGATACACTC 1664 Query 2095 AGCTCCAA-GTCGTCCAAGCATGTCATTAACTGCCCAGGGATCCAGGTCCCCGCATTGAG 2153 |||| || || ||| | ||| | || |||| || || ||| || || |||| Sbjct 1663 AGCTGGAACCTCCGACAA-AAAGTCGCTGACGACCCATGGGTCAAGGCTGCCACACTGAG 1605 Query 2154 GGTAAGTGAGGAGGCCATA 2172 ||| |||| ||| |||| Sbjct 1604 AGTAGGTGATGAGTGCATA 1586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7001248421034