Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_024691.1
Length=2259
Score E
Sequences producing significant alignments: (Bits) Value
seq37548 104 3e-19
>seq37548
Length=2359
Score = 104 bits (114), Expect = 3e-19
Identities = 203/295 (69%), Gaps = 4/295 (1%)
Strand=Plus/Minus
Query 1823 CCCAAAACTCTTGCTCACTCTCAGCATTGATGATTTCAGCCCACACCCCACTAGTTGCAT 1882
|||||||||||| || |||| |||| | ||| | |||| | || ||| |
Sbjct 1952 CCCAAAACTCTTCAGCAGTCTCCGCATCCACAATTCGATCCCAGATTTCATTAGCGTGAG 1893
Query 1883 CCAC-TCTGCCTGCAACAGGTCGCTCGAGTCCCCCAGCAACAACATCTCCATCTTTGATT 1941
|||| || || | || | ||||| |||| ||||| || ||||| || ||||||||||||
Sbjct 1892 CCACATCAGC-TCCACCTGGTCGTCCGAGCCCCCCCGCGACAACGTCACCATCTTTGATT 1834
Query 1942 GCATAATCAAACCCCTCTTCTGGTGTTCCGCGAGAAGGCGATACATTTGGGTGGCATCCT 2001
||||| || || || | ||||| | || ||||| || || ||||| ||
Sbjct 1833 GCATAGTCGTACATCTTGCCCGGTGTGCGGCCGCAAGGCTGTATGTTCGGGTGATGGCCG 1774
Query 2002 TCAACATCGAATGCACGCGCGTTCCGGGTCCTATATTTGACT-CCGAAGTCGACAAAAGC 2060
|| ||||| ||| | | || ||| || | | ||| || ||||| || || ||
Sbjct 1773 TCCACATCAAATCGTCTGGGGTCTGAGGTG-TAGAATCGACAACCAAAGTCAACGAACGC 1715
Query 2061 GTGCAGATGAAGACCCCCATCTGCGTGATTCTCTCGGCCGATGATGCATTCAGCT 2115
||| ||||||| || ||||| || ||||||||||| || ||||| || ||||||
Sbjct 1714 GTGGAGATGAACTCCTCCATCAGCATGATTCTCTCGTCCAATGATACACTCAGCT 1660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7109893992150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |