Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_004675.1 Length=2766 Score E Sequences producing significant alignments: (Bits) Value seq3 78.8 2e-11 >seq3 Length=50312079 Score = 78.8 bits (86), Expect = 2e-11 Identities = 130/185 (70%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 1152 CTGCTCTAATTACATTGTTAATTGAAATTACACCCAAATTATCTAAATACTTAAAAACTT 1211 |||| ||||||||||||||||||||||| || || || | || || ||| || | || | Sbjct 3133071 CTGCCCTAATTACATTGTTAATTGAAATAACTCCTAATTGATTTAGATAATTCATTACAT 3133012 Query 1212 GAAATTTAAATACGCTTAAGAAACGACCAGTCTGAGGCTGT-AAGGTCGTCCAGACTTGG 1270 |||| ||||| || |||| ||| | || | ||| || |||||||| | | | Sbjct 3133011 GAAACCTAAATCTAGATATAAAACCCTCAG-CCGAAGGTGTCAAAGTCGTCCAAAATGTG 3132953 Query 1271 AAGTTGAGAAAACATTTGTGAATCCCCAGTTCCTTCCGGAGGTTGTGGTTGAACCGTATC 1330 || || | | |||||||| |||| || | | ||||| || | ||| || || ||| Sbjct 3132952 AAATTTATCCAGCATTTGTGGATCCTTAGAGCTCTTCGGAGATTATTGTTAAAACGAATC 3132893 Query 1331 TGGAT 1335 ||||| Sbjct 3132892 TGGAT 3132888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8738738706790