Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daucus_20carota_20subsp._20sativus_20[genbank_20GCA_5F001625215.1_20 2016-05-24] 4,826 sequences; 421,502,825 total letters Query= NC_033779.1 Length=2784 Score E Sequences producing significant alignments: (Bits) Value seq3 80.6 5e-12 >seq3 Length=50312079 Score = 80.6 bits (88), Expect = 5e-12 Identities = 170/250 (68%), Gaps = 8/250 (3%) Strand=Plus/Minus Query 1152 CTGCTCTAATTACATTATTAATTGAAATTACTTCTAAATGCTTCAGATGCTTGAGAACTT 1211 |||| ||||||||||| ||||||||||| ||| |||| || || |||| || | || | Sbjct 3133071 CTGCCCTAATTACATTGTTAATTGAAATAACTCCTAATTGATTTAGATAATTCATTACAT 3133012 Query 1212 GGAATTTAAAGACCCTTAAGAAAAGAC---CAGTCTGAGGCCGTAAGGTCGTCCAGACTT 1268 | || |||| || | | || || ||| | ||| || |||||||| | | Sbjct 3133011 GAAACCTAAA---TCTAGATATAAAACCCTCAGCCGAAGGTGTCAAAGTCGTCCAAAATG 3132955 Query 1269 TGAAGTTGAGAAAACATTTGTGAATCCCCAGTGCCCTCCTGAGGTTGTGATTGAACCGTA 1328 |||| || | | |||||||| |||| || || || | ||| || | || || || | Sbjct 3132954 TGAAATTTATCCAGCATTTGTGGATCCTTAGAGCTCTTCGGAGATTATTGTTAAAACGAA 3132895 Query 1329 TCTGTAATGTGATGATGTCCTGGTTCATGTTGAATGGCCTGATGTCG-TGTCTTGTTATC 1387 |||| | | || || ||| | ||||||| ||||| || ||| | || ||| || | Sbjct 3132894 TCTGGATTTCTATAATATCCAGATTCATGTCAAATGGTCT-TTGTAGATGCCTTACTACC 3132836 Query 1388 GTGAAATATA 1397 ||||||||| Sbjct 3132835 CTGAAATATA 3132826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8796335666410