Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosera_20capensis_20[genbank_20GCA_5F001925005.1_202016-12-30] 12,713 sequences; 263,787,800 total letters Query= NC_005812.1 Length=2752 Score E Sequences producing significant alignments: (Bits) Value seq10334 91.5 3e-15 >seq10334 Length=70309 Score = 91.5 bits (100), Expect = 3e-15 Identities = 164/232 (71%), Gaps = 11/232 (5%) Strand=Plus/Minus Query 1708 GGAATTCCACCTTTAATTTGAATTGG-TTTACCGTACTTTGTA-TTGCTTTGCCAGTCCC 1765 |||||||| ||||||||||||| || ||| ||||| |||| | |||||||||||||| Sbjct 52357 GGAATTCCGCCTTTAATTTGAACCGGCTTTTCCGTA-TTTGCAGTTGCTTTGCCAGTCAT 52299 Query 1766 TCTGGG-CCCCCATGAATTCTTTTAAGTGCTTTAGAT---AATG---CGGATCTACGTCA 1818 |||| |||||| |||||||| |||||||| | |||| ||| |||||| Sbjct 52298 GTTGGGCCCCCCAATAATTCTTTCCCGTGCTTTAATTTCAAATGTGCAGGACTGACGTCA 52239 Query 1819 TCAATGACGTTATACCAAGCATCATTGCTGTACACTTTTGGGCTAAGGTCTAGATGTCCA 1878 || || ||||| || | || ||| |||||| || | | | |||| ||| || Sbjct 52238 TCGATTACGTTGTAGTCGACGTCGTTGTCGTACACCTTGTTGTTGAAATCTAAATGGCCG 52179 Query 1879 CACAAATAATTATGAGGGCCCAATGATCTGGCCCACATTG-TTTTGCCGGTT 1929 | | ||| || || |||| | |||||| ||||| || | ||||||||| Sbjct 52178 CTGAGATATTTGTGCCGGCCGATTGATCTAGCCCATGCTGCTCTTGCCGGTT 52127 Score = 80.6 bits (88), Expect = 5e-12 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 2202 TGCGTCATTGGCGGATTGTTGTCCGCCTCTAGCAGATCTTCCATCAACCTGGAATTCTCC 2261 |||||| || || || ||||| |||||||||||||||| ||| || | ||||||||| | Sbjct 51912 TGCGTCGTTAGCAGACTGTTGACCGCCTCTAGCAGATCGTCCGTCGATCTGGAATTCGTC 51853 Query 2262 CCATTCAATTGTATCTC 2278 |||||||| ||| |||| Sbjct 51852 CCATTCAAGTGTGTCTC 51836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8696425166244