Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosera_20capensis_20[genbank_20GCA_5F001925005.1_202016-12-30] 12,713 sequences; 263,787,800 total letters Query= NC_029105.1 Length=2700 Score E Sequences producing significant alignments: (Bits) Value seq10334 116 6e-23 >seq10334 Length=70309 Score = 116 bits (128), Expect = 6e-23 Identities = 164/224 (73%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 1657 CGATTGAAGGAACCCCGCCTTTAATTTGAACAGGC-TTTCCGTACTTGCAATTGGATTGC 1715 ||| ||| |||| ||||||||||||||||| ||| |||||||| ||||| ||| |||| Sbjct 52365 CGACTGATGGAATTCCGCCTTTAATTTGAACCGGCTTTTCCGTATTTGCAGTTGCTTTGC 52306 Query 1716 CAGTCCCTTTGGG--CCCCGATAAGTTCCTTCCAGTGCTTTAGCTTTAGATAATGC-GGG 1772 ||||| ||||| |||| |||| ||| |||| |||||||| || | || ||| || Sbjct 52305 CAGTCATGTTGGGCCCCCCAATAA-TTCTTTCCCGTGCTTTAATTTCAAAT-GTGCAGGA 52248 Query 1773 CTTACATCATCAATGACGTTATACTCCACATTGTTCGAGTAAACCCTAGAATTGAAGTCT 1832 || || ||||| || ||||| || || || | ||| ||| ||| | ||||| ||| Sbjct 52247 CTGACGTCATCGATTACGTTGTAGTCGACGTCGTTGTCGTACACCTTGTTGTTGAAATCT 52188 Query 1833 AGGTGCCCGCTCAAATAATTATGTGGGCCTAACGCTCGAGCCCA 1876 | || ||||| | ||| || || |||| | | || |||||| Sbjct 52187 AAATGGCCGCTGAGATATTTGTGCCGGCCGATTGATCTAGCCCA 52144 Score = 78.8 bits (86), Expect = 2e-11 Identities = 61/73 (84%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2172 TCGTTAGCCGTTTGCTGACCTCCTCTAGCACTTCGTCCGTCGATCTGGAATGTTCCCCAT 2231 |||||||| | || ||||| ||||||||| ||||||||||||||||||| ||||| Sbjct 51908 TCGTTAGCAGACTGTTGACCGCCTCTAGCAGATCGTCCGTCGATCTGGAATTCGTCCCAT 51849 Query 2232 TCAAGAGTGTCTC 2244 ||||| ||||||| Sbjct 51848 TCAAGTGTGTCTC 51836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8530047642828