Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Embelia_20ribes_20[genbank_20GCA_5F001753735.1_202016-10-06] 107,000 sequences; 660,509,584 total letters Query= NC_004005.1 Length=2781 Score E Sequences producing significant alignments: (Bits) Value seq60873 78.8 2e-11 >seq60873 Length=7864 Score = 78.8 bits (86), Expect = 2e-11 Identities = 87/116 (75%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 1843 GTCATCAATGACGTTGTACCACGCATCATTACTGTACACCTTTGGGCTTAGGTCTAGATG 1902 ||| ||||| | ||||||||||||||| | | | || || ||| | | || ||||| Sbjct 5783 GTCGTCAATAATGTTGTACCACGCATCGTCATTATAAGTGTTCGGGTTAAAATCAAGATG 5842 Query 1903 TCCACATAAATAATTATGTGGGCCTAGAGACCTGGCCCACATTGTTTTGCCTGTTC 1958 || ||||| || || ||||||||||| |||| |||||| || ||||||| ||| Sbjct 5843 CCCGCATAAGTAGTTGTGTGGGCCTAGGGACCGGGCCCAACATGCTTTGCCTATTC 5898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8776916230000