Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Embelia_20ribes_20[genbank_20GCA_5F001753735.1_202016-10-06] 107,000 sequences; 660,509,584 total letters Query= NC_004654.1 Length=2761 Score E Sequences producing significant alignments: (Bits) Value seq106965 78.8 2e-11 seq32205 78.8 2e-11 >seq106965 Length=9667 Score = 78.8 bits (86), Expect = 2e-11 Identities = 76/95 (80%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 2619 TTGACTTGGTCAATTGGTACCAATTGATCTCTTCTCTG-GTATCGGTACATTGGTACCAA 2677 |||||||| ||||| | ||| ||| | | |||| | || |||||||||||||||| Sbjct 993 TTGACTTG-TCAATGGATACTAATACAAATTGGCTCTATGAATTGGTACATTGGTACCAA 1051 Query 2678 TATATAGTCTGGTACCAAATGGCATTATTGTAATT 2712 |||||| |||||||||||||||||| | |||||| Sbjct 1052 TATATACCCTGGTACCAAATGGCATTTTGGTAATT 1086 >seq32205 Length=9707 Score = 78.8 bits (86), Expect = 2e-11 Identities = 76/95 (80%), Gaps = 2/95 (2%) Strand=Plus/Minus Query 2619 TTGACTTGGTCAATTGGTACCAATTGATCTCTTCTCTG-GTATCGGTACATTGGTACCAA 2677 |||||||| ||||| | ||| ||| | | |||| | || |||||||||||||||| Sbjct 8656 TTGACTTG-TCAATGGATACTAATACAAATTGGCTCTATGAATTGGTACATTGGTACCAA 8598 Query 2678 TATATAGTCTGGTACCAAATGGCATTATTGTAATT 2712 |||||| |||||||||||||||||| | |||||| Sbjct 8597 TATATACCCTGGTACCAAATGGCATTTTGGTAATT 8563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8716479174000