Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Embelia_20ribes_20[genbank_20GCA_5F001753735.1_202016-10-06] 107,000 sequences; 660,509,584 total letters Query= NC_015324.1 Length=2824 Score E Sequences producing significant alignments: (Bits) Value seq60873 80.6 5e-12 >seq60873 Length=7864 Score = 80.6 bits (88), Expect = 5e-12 Identities = 101/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 1890 GTCATCAATGACGTTATACCAAGCACTGTTACTATATACTTTTGGGCTTAGATCTAAATG 1949 ||| ||||| | ||| ||||| ||| || | |||| || ||| | | ||| | ||| Sbjct 5783 GTCGTCAATAATGTTGTACCACGCATCGTCATTATAAGTGTTCGGGTTAAAATCAAGATG 5842 Query 1950 CCCACACAAATAATTGTGAGGGCCCAAAGACCTGGCCCATACTGTTTTGCCTATTCTGCT 2009 ||| || || || ||||| ||||| | |||| |||||| || ||||||||||| Sbjct 5843 CCCGCATAAGTAGTTGTGTGGGCCTAGGGACCGGGCCCAACATGCTTTGCCTATTCGAGA 5902 Query 2010 TGGGCCTTCAATAACAATG 2028 ||||||||||| |||||| Sbjct 5903 CGGGCCTTCAATTACAATG 5921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8914355195000