Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Embelia_20ribes_20[genbank_20GCA_5F001753735.1_202016-10-06] 107,000 sequences; 660,509,584 total letters Query= NC_025680.1 Length=2763 Score E Sequences producing significant alignments: (Bits) Value seq60873 84.2 4e-13 >seq60873 Length=7864 Score = 84.2 bits (92), Expect = 4e-13 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 1825 GTCATCAATGACGTTGTACCACGCATCATTACTGTACACCTTTGGGCTTAGGTCTAGATG 1884 ||| ||||| | ||||||||||||||| | | | || || ||| | | || ||||| Sbjct 5783 GTCGTCAATAATGTTGTACCACGCATCGTCATTATAAGTGTTCGGGTTAAAATCAAGATG 5842 Query 1885 TCCACATAAATAATTATGTGGGCCTAGAGACCTGGCCCACATTGTTTTGCCTGTTCTACT 1944 || ||||| || || ||||||||||| |||| |||||| || ||||||| ||| | Sbjct 5843 CCCGCATAAGTAGTTGTGTGGGCCTAGGGACCGGGCCCAACATGCTTTGCCTATTCGAGA 5902 Query 1945 ATCACCTTCAATGACAATACCTATGG 1970 |||||||| ||||| | || || Sbjct 5903 CGGGCCTTCAATTACAATGCTTAAGG 5928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8722871898000