Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_007461.1 Length=4530 Score E Sequences producing significant alignments: (Bits) Value seq624 84.2 6e-13 >seq624 Length=2007 Score = 84.2 bits (92), Expect = 6e-13 Identities = 174/259 (67%), Gaps = 9/259 (3%) Strand=Plus/Minus Query 878 CTTCTCCTGTGACGATTAATTCTCTTCGTGAAGCTTTCCAATTGCAAAAGCTTTATGAGA 937 || || ||| || || ||| |||||| | |||| ||| | |||||||| |||| Sbjct 372 CTACTGCTGCTACTATCAATCAGCTTCGTCAGTCTTTTCAAATTCAAAAGCTGCTTGAGC 313 Query 938 GAGATGCCCGTGGTGGAACAAGGTACATTGAGATTATTCGTTCCCATTTCAATGTGCAGT 997 | || || ||||| || || |||| | ||||| || || || || || || | Sbjct 312 GGGACGCTCGTGGCGGTACTCGGTATACCGAGATAATCCGCTCACACTTTGGCGTAGCTT 253 Query 998 CTCCAGATGCAAGGTTGCAACGTGCAGAGTATCTTGGAGGTTCTTCAACTCCTGTGAATA 1057 |||||||||| | | ||||| | |||||| | || ||| ||| |||||| | |||| Sbjct 252 CTCCAGATGCTCGCCTTCAACGCCCTGAGTATTTGGGCGGTGGTTCTACTCCTATTAATA 193 Query 1058 TTTCTCCGATTCCACAGACT-----TCCT----CAACAGACTCCACATCTCCTCAAGGAA 1108 || |||| ||| | || ||| | || || || | | || |||||||||| | Sbjct 192 TTGCTCCTATTGCTCAAACTGGTGGTACTGGTGCACAAGGCACTACTACTCCTCAAGGTA 133 Query 1109 ATCTTGCTGCTTATGGTAC 1127 | || ||||| | |||||| Sbjct 132 ACCTGGCTGCGTTTGGTAC 114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14383520473400