Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_027637.1 Length=4656 Score E Sequences producing significant alignments: (Bits) Value seq624 93.3 1e-15 >seq624 Length=2007 Score = 93.3 bits (102), Expect = 1e-15 Identities = 148/212 (70%), Gaps = 9/212 (4%) Strand=Plus/Minus Query 442 GCTTACAACAAGGTTTATAATGATTGGTATCGCGATCAGAATTTACAAGATTCTGTTGTT 501 |||||||| ||||||| | |||| ||| || ||||||||||| |||| ||||| Sbjct 736 GCTTACAATCTTATTTATAACCAATGGTTTCGTGACGAGAATTTACAAAATTCCGTTGTA 677 Query 502 TTGCCTAATGGTGATGGTCCTGA------TGCTCCTACTGATTATGTTTTGTTGCCTCGT 555 | ||| || ||||| ||||| | || ||||| |||| | | | | |||| Sbjct 676 GTCGATAAGGGCGATGGCCCTGATACTACTCCTTCTACTAATTACACTCTTCTTCGTCGT 617 Query 556 GGTAAACGCCACGATTATTTTACCTCTGCACTTCCTACACCTCAGAAGGGTG---CTGCT 612 |||||||| ||||| || || ||||||||| | ||| || || ||||| | |||| Sbjct 616 GGTAAACGACACGACTACTTCACCTCTGCATTACCTTGGCCCCAAAAGGGCGGCACTGCC 557 Query 613 GTTCAGCTTCCACTTGGTACTACCGCACCTAT 644 ||| || || | |||||| | |||||||| Sbjct 556 GTTTCTCTACCTTTAGGTACTTCTGCACCTAT 525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14786707031720