Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fragaria_20vesca_20subsp._20vesca_20[refseq_20GCF_5F000184155.1_2020 11-02-24] 3,048 sequences; 214,373,013 total letters Query= NC_030458.1 Length=5016 Score E Sequences producing significant alignments: (Bits) Value seq624 102 3e-18 >seq624 Length=2007 Score = 102 bits (112), Expect = 3e-18 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 3244 TACTATAAATGACCTTCGAACTGCTTTTCAGATGCAGAGACTGAAGGAGCGTGACGCGCG 3303 |||||| ||| | ||||| ||||||| || || | ||| ||||| ||||| || Sbjct 362 TACTATCAATCAGCTTCGTCAGTCTTTTCAAATTCAAAAGCTGCTTGAGCGGGACGCTCG 303 Query 3304 TGGTGGAACTCGTTATACCGAGATACTTCGCGCTCATTTTGGCGTTGTCTCTCCCGATAG 3363 ||| || ||||| |||||||||||| | ||| | || |||||||| | ||||| ||| Sbjct 302 TGGCGGTACTCGGTATACCGAGATAATCCGCTCACACTTTGGCGTAGCTTCTCCAGATGC 243 Query 3364 TCGACTTCAGCGTCCTGAGTATCTTGGTGGCGGT 3397 ||| ||||| || ||||||||| | || || ||| Sbjct 242 TCGCCTTCAACGCCCTGAGTATTTGGGCGGTGGT 209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15938668626920