Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_003865.1 Length=2663 Score E Sequences producing significant alignments: (Bits) Value seq33 141 2e-30 seq3283 140 5e-30 seq3439 136 7e-29 seq22495 129 1e-26 seq5745 127 3e-26 seq77518 123 4e-25 seq953 122 1e-24 seq54129 118 2e-23 seq1993 114 2e-22 seq442 114 2e-22 seq20728 109 9e-21 seq815 109 9e-21 seq4295 102 1e-18 seq1010 98.7 2e-17 seq490 93.3 7e-16 seq3059 82.4 1e-12 >seq33 Length=454124 Score = 141 bits (156), Expect = 2e-30 Identities = 264/380 (69%), Gaps = 17/380 (4%) Strand=Plus/Minus Query 1463 ATAGAGGGGGCAGTTGAGGAAGATGAATTTGGCATTTTTGAGTGTCCAC--TCTCTAAGT 1520 ||||||||| || || |||| ||||| ||||| | | |||||| | || || | Sbjct 403408 ATAGAGGGGT--GTCGATGAAGTGGAATTCTGCATTCTGTAAAGTCCACGATTTCCAATT 403351 Query 1521 GCTGCATTTTCAGCTTTGTCGAGGAAATCTTTATAGCTGGCCCCCTCT-----CCAGGAT 1575 || |||| | || | |||| ||| ||||||| | | |||| ||||||| Sbjct 403350 --TGAATTTGAATCTATATCGAAGAACGCTTTATAA---GACAACTCTGGACCCCAGGAT 403296 Query 1576 TGCACAGCACGATTGAAGGGATACCGCCTTTAATTTGAACTGACTTTCCATA-TTTACAG 1634 |||| |||||||| | || || |||| |||||||||||||| ||||| || ||| || Sbjct 403295 TGCAAAGCACGATACATGGAATCCCGCTTTTAATTTGAACTGGTTTTCCGTACTTTGCAT 403236 Query 1635 TTGGACTGCCAGTCCCTCTGGGCCCCAATCAATTCTTTCCAGTGCGTTAGCTTTAAATAA 1694 ||| ||||||||| | ||| | || | || | || | || || |||||||| Sbjct 403235 TTG-ACTGCCAGTTGCACTGTACGCCTACGAACTGTTGATAATGATTTTTAATTAAATAA 403177 Query 1695 TGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAACACCCTAGAATTG 1754 |||| |||||||||||||||||||||| |||| || ||| | || ||||| Sbjct 403176 GCTGGAGGGACGTCATCAATGACGTTATACCACGCGTCGTTCGAGTATGTTCTCGAATTC 403117 Query 1755 AAATCCAGATGACCACTCATATAGTTATGTGGGCCTAAAGCACGAGCCCACATTGTTTTG 1814 ||||||| | || | || || |||||||| || || | ||| ||||| | |||||| Sbjct 403116 AAATCCATAAAGCCCATTATGTAATTATGTGGACCCAACGAACGTGCCCAAACTGTTTT- 403058 Query 1815 CCAGTTCTAGAATCACCTTC 1834 || |||||||| ||||| Sbjct 403057 TCAATTCTAGAAGGTCCTTC 403038 >seq3283 Length=49157 Score = 140 bits (154), Expect = 5e-30 Identities = 188/259 (73%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 1568 TCCAGGATTGCACAGCACGATTGAAGGGATACCGCCTTTAATTTGAACTGACTTTCCATA 1627 |||||||||||| || ||||| || || ||||||||||||||||||| || || || Sbjct 2281 TCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTGGTTTCCCGTA 2222 Query 1628 -TTTACAGTTGGACTGCCAGTCCCTCTGGGCCCCAATCAATTCTTTCCAGTGCGTTAGCT 1686 ||| || |||| |||||| | | ||| || || | || | || | ||| | Sbjct 2221 CTTTGCA-TTGGCCTGCCAATTTCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTAA 2163 Query 1687 TTAAATAATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAACACCC 1746 ||||||||| ||||| |||||| || |||||||||||| | ||||||||| || Sbjct 2162 TTAAATAATTCGGAGGGACGTCGTCGATGACGTTATACCATGCATCATTTGAGTACGTTT 2103 Query 1747 TAGAATTGAAATCCAGATGACCACTCATATAGTTATGTGGGCCTAAAGCACGAGCCCACA 1806 | ||||| ||||||| | || | || ||||| ||||||||||| | ||||||||| Sbjct 2102 TGGAATTAAAATCCATAAATCCCATTATGTAGTTGTGTGGGCCTAATGAACGAGCCCATG 2043 Query 1807 TTGTTTTGCCAGTTCTAGA 1825 |||||| || |||| || Sbjct 2042 CTGTTTTCCCTATTCTTGA 2024 >seq3439 Length=62978 Score = 136 bits (150), Expect = 7e-29 Identities = 185/258 (72%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 1568 TCCAGGATTGCACAGCACGATTGAAGGGATACCGCCTTTAATTTGAACTGACTTTCCATA 1627 |||| ||||||| || ||||| || || ||||||||||||||||||| ||||| || Sbjct 961 TCCAAGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTGGTTTTCCGTA 902 Query 1628 TTTACAGTTGGACTGCCAGTCCCTCTGGGCCCCAATCAATTCTTTCCAGTGCGTTAGCTT 1687 || ||||| ||||| | | ||| || || | || | || | ||| | | Sbjct 901 CTTTGCGTTGGCATGCCAATTTCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTAAT 842 Query 1688 TAAATAATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAACACCCT 1747 |||||||| ||||| ||| ||||| |||||||||||| | ||||||||| || | Sbjct 841 TAAATAATTCGGAGGGACATCATCGATGACGTTATACCATGCATCATTTGAGTACGTTTT 782 Query 1748 AGAATTGAAATCCAGATGACCACTCATATAGTTATGTGGGCCTAAAGCACGAGCCCACAT 1807 ||||| ||||||| | || | || ||||| ||||||||||| | ||||||||| Sbjct 781 GGAATTAAAATCCATAAATCCCATTATGTAGTTGTGTGGGCCTAATGAACGAGCCCATGC 722 Query 1808 TGTTTTGCCAGTTCTAGA 1825 |||||| || |||| || Sbjct 721 TGTTTTCCCTATTCTTGA 704 >seq22495 Length=567 Score = 129 bits (142), Expect = 1e-26 Identities = 170/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 1568 TCCAGGATTGCACAGCACGATTGAAGGGATACCGCCTTTAATTTGAACTGACTTTCCATA 1627 |||||||||||| || ||||| | || |||| |||||||||||||| ||||| || Sbjct 368 TCCAGGATTGCAAAGTACGATACTTAGAATCCCGCATTTAATTTGAACTGGTTTTCCGTA 309 Query 1628 -TTTACAGTTGGACTGCCAGTCCCTCTGGGCCCCAATCAATTCTTTCCAGTGCGTTAGCT 1686 ||| || |||| |||||||| | ||| || || | || | || || ||| | Sbjct 308 CTTTGCA-TTGGCCTGCCAGTTGCGCTGTGCGCCTACGAACTGTTGACAATGCTTCTTAA 250 Query 1687 TTAAATAATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAACACCC 1746 ||||||||| ||||| || |||||| |||||||||||| | ||||||||| || Sbjct 249 TTAAATAATTCGGAGGGATGTCATCGATGACGTTATACCATGCATCATTTGAGTACGTTT 190 Query 1747 TAGAATTGAAATCCAGATGACCACTCATATAGTTATGTGGGCCTAAAGCACGA 1799 | ||||| ||||||| | || | || ||||| ||||||||||| | |||| Sbjct 189 TGGAATTAAAATCCAAAAATCCTATTATGTAGTTGTGTGGGCCTAATGAACGA 137 >seq5745 Length=45059 Score = 127 bits (140), Expect = 3e-26 Identities = 255/374 (68%), Gaps = 17/374 (5%) Strand=Plus/Plus Query 1463 ATAGAGGGGGCAGTTGAGGAAGATGAATTTGGCATTTTTGAGTGTCCAC--TCTCTAAGT 1520 |||||| ||| || || |||| |||| ||||||| | ||| || | ||||| | Sbjct 43432 ATAGAGAGGGGTGTCGATGAAGTGTAATTCAGCATTTTGTAAAGTCAACGATTTCTAATT 43491 Query 1521 GCTGCATTTTCAGCTTTGTCGAGGAAATCTTTATAG-------CTGGCCCCCTCTCCAGG 1573 || |||| | || | || | ||| ||||||| |||| |||| |||| Sbjct 43492 --TGAATTTGAATCTATATCTAAGAACGCTTTATAAGATAAATCTGGACCCC----CAGG 43545 Query 1574 ATTGCACAGCACGATTGAAGGGATACCGCCTTTAATTTGAACTGACTTTCCATA-TTTAC 1632 |||||| | |||||| | || || || |||||||||||||||| || || || ||| | Sbjct 43546 ATTGCAAATCACGATACATGGAATCCCACCTTTAATTTGAACTGGTTTGCCGTACTTTGC 43605 Query 1633 AGTTGGACTGCCAGTCCCTCTGGGCCCCAATCAATTCTTTCCAGTGCGTTAGCTTTAAAT 1692 | ||| ||||||| | | || || || || || | || | || || |||||| Sbjct 43606 ATTTG-ACTGCCAATTGCATTGTGCTCCTATGAACTGTTGATAATGTTTTTTAATTAAAT 43664 Query 1693 AATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAACACCCTAGAAT 1752 || |||| || ||||||||||||||||||| |||| || || | | |||| Sbjct 43665 AAGCTGGAGGGATGTCATCAATGACGTTATACCATGCGTCGTTCGATTATGTTTTCGAAT 43724 Query 1753 TGAAATCCAGATGACCACTCATATAGTTATGTGGGCCTAAAGCACGAGCCCACATTGTTT 1812 | ||||||| | || | ||||| |||||||| || || | ||| ||||| | ||||| Sbjct 43725 TCAAATCCATAAAGCCCATTATATAATTATGTGGACCCAACGAACGTGCCCAAACTGTTT 43784 Query 1813 TGCCAGTTCTAGAA 1826 | || |||||||| Sbjct 43785 TACCGATTCTAGAA 43798 >seq77518 Length=14724 Score = 123 bits (136), Expect = 4e-25 Identities = 183/257 (71%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 1569 CCAGGATTGCACAGCACGATTGAAGGGATACCGCCTTTAATTTGAACTGACTTTCCATA- 1627 ||||||||||| || ||||| | || || |||||||||||||||||||| ||| | || Sbjct 2400 CCAGGATTGCAAAGTACGATACATGGAATCCCGCCTTTAATTTGAACTGATTTTTCGTAC 2341 Query 1628 TTTACAGTTGGACTGCCAGTCCCTCTGGGCCCCAATCAATTCTTTCCAGTGCGTTAGCTT 1687 ||| || ||| |||| |||| | || || || | || | || | ||| || | Sbjct 2340 TTTGCATTTG-ACTGTCAGTTGCGTTGTGCTCCTACGAACTGTTGATAATGCTTTTTAAT 2282 Query 1688 TAAATAATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAACACCCT 1747 ||||||| |||| ||| |||||||||||||||||| |||| || ||| | | Sbjct 2281 TAAATAAGCTGGAGGGACATCATCAATGACGTTATACCACGCGTCGTTCGAGTATGTTTT 2222 Query 1748 AGAATTGAAATCCAGATGACCACTCATATAGTTATGTGGGCCTAAAGCACGAGCCCACAT 1807 |||| ||||||| | || | ||||| |||||||| || || ||| ||||| | Sbjct 2221 CAAATTCAAATCCATAAAGCCCATTATATAATTATGTGGACCCAACTAACGTGCCCAAAC 2162 Query 1808 TGTTTTGCCAGTTCTAG 1824 |||||| || |||||| Sbjct 2161 TGTTTTACCGATTCTAG 2145 >seq953 Length=224861 Score = 122 bits (134), Expect = 1e-24 Identities = 184/259 (71%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 1568 TCCAGGATTGCACAGCACGATTGAAGGGATACCGCCTTTAATTTGAACTGACTTTCCATA 1627 |||||||||||| | ||||| || || |||||||||||||||| ||| ||||| || Sbjct 1842 TCCAGGATTGCAAAATACGATACTTGGAATCCCGCCTTTAATTTGAATTGATTTTCCGTA 1901 Query 1628 -TTTACAGTTGGACTGCCAGTCCCTCTGGGCCCCAATCAATTCTTTCCAGTGCGTTAGCT 1686 ||| || ||| |||||| | | ||| | || | || | || | | | || Sbjct 1902 CTTTGCA-TTGACCTGCCAATGTCGCTGTACGCCTACGAACTGTTGATAATACTTTTTAA 1960 Query 1687 TTAAATAATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAACACCC 1746 ||||||||| ||||| |||||| || || ||||||||| | ||||||||| || Sbjct 1961 TTAAATAATTCGGAGGGACGTCGTCGATAACGTTATACCATGCATCATTTGAGTACGTTT 2020 Query 1747 TAGAATTGAAATCCAGATGACCACTCATATAGTTATGTGGGCCTAAAGCACGAGCCCACA 1806 | ||||| ||||||| | | | || ||||| ||||||||||| | ||||||||| Sbjct 2021 TCGAATTAAAATCCATAAATCTCATTATGTAGTTGTGTGGGCCTAATGAACGAGCCCATG 2080 Query 1807 TTGTTTTGCCAGTTCTAGA 1825 |||||| || |||| || Sbjct 2081 CTGTTTTCCCTATTCTTGA 2099 >seq54129 Length=2260 Score = 118 bits (130), Expect = 2e-23 Identities = 183/259 (71%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 1568 TCCAGGATTGCACAGCACGATTGAAGGGATACCGCCTTTAATTTGAACTGACTTTCCATA 1627 |||||||||||| || ||||| || || |||||||||||||||| || ||||| || Sbjct 2258 TCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAATTGGTTTTCCGTA 2199 Query 1628 -TTTACAGTTGGACTGCCAGTCCCTCTGGGCCCCAATCAATTCTTTCCAGTGCGTTAGCT 1686 ||| || |||| ||| |||| ||| || || | || | || | ||| | Sbjct 2198 CTTTGCA-TTGGCCTGTCAGTTGTGCTGTGCGCCTACGAACTGTTGGTAATGCTTCTTAA 2140 Query 1687 TTAAATAATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAACACCC 1746 ||||||||| ||||| ||| || || |||||||||||| || ||||||||| | Sbjct 2139 TTAAATAATTCGGAGGGACATCGTCGATGACGTTATACCATACATCATTTGAGTATGTTT 2080 Query 1747 TAGAATTGAAATCCAGATGACCACTCATATAGTTATGTGGGCCTAAAGCACGAGCCCACA 1806 | ||||| |||| || | || | || ||||| ||| ||| ||| | ||||||||| Sbjct 2079 TGGAATTAAAATTCATAAATCCCATTATGTAGTTGTGTTGGCATAATGAACGAGCCCATG 2020 Query 1807 TTGTTTTGCCAGTTCTAGA 1825 |||||| || |||| || Sbjct 2019 CTGTTTTTCCTATTCTTGA 2001 >seq1993 Length=81530 Score = 114 bits (126), Expect = 2e-22 Identities = 189/270 (70%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 1566 TCTCCAGGATTGCACAGCACGATTGAAGGGATACCGCCTTTAATTTGAACTGACTTTCCA 1625 || ||||||||||| |||||||| | || || ||| ||||||||||||||| || || Sbjct 74406 TCCCCAGGATTGCAAAGCACGATACATGGAATCCCGTCTTTAATTTGAACTGGTTTGCCG 74347 Query 1626 TA-TTTACAGTTGGACTGCCAGTCCCTCTGGGCCCCAATCAATTCTTTCCAGTGCGTTAG 1684 || ||| || || |||||||| | | || || | | || | || | || || Sbjct 74346 TACTTTGCA-TTTGACTGCCAATTGCGTTGTGCTCATACGAACTGTTGATAATGATTTTT 74288 Query 1685 CTTTAAATAATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAACAC 1744 |||||||| |||| |||||||||||||||||||||| ||| || || | Sbjct 74287 AATTAAATAAGCTGGAGGGACGTCATCAATGACGTTATACCACGCGTTGTTCGATTATGT 74228 Query 1745 CCTAGAATTGAAATCCAGATGACCACTCATATAGTTATGTGGGCCTAAAGCACGAGCCCA 1804 | ||||| ||||||| | || | ||||| |||||||| || || | ||| | ||| Sbjct 74227 TTTCGAATTCAAATCCATAAAGCCCATTATATAATTATGTGGACCCAACGAACGTGTCCA 74168 Query 1805 CATTGTTTTGCCAGTTCTAGAATCACCTTC 1834 | |||||| || |||||||| ||||| Sbjct 74167 AACTGTTTTACCGATTCTAGAAGGTCCTTC 74138 >seq442 Length=237535 Score = 114 bits (126), Expect = 2e-22 Identities = 184/259 (71%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 1568 TCCAGGATTGCACAGCACGATTGAAGGGATACCGCCTTTAATTTGAACTGACTTTCCATA 1627 |||||||||||| || |||| || || ||||||||||||||||||| ||||| || Sbjct 22780 TCCAGGATTGCAAAGTTCGATACTTGGAATCTCGCCTTTAATTTGAACTGATTTTCCGTA 22839 Query 1628 -TTTACAGTTGGACTGCCAGTCCCTCTGGGCCCCAATCAATTCTTTCCAGTGCGTTAGCT 1686 ||| || |||| |||| ||| | || || || | || | || | ||| || Sbjct 22840 CTTTGCA-TTGGCCTGCTAGTGTCGTTGTGCGCCTACGAACTGTTAATAATGCTTTTTAA 22898 Query 1687 TTAAATAATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAACACCC 1746 ||||||||| || || |||||| || || ||||||||| || | ||||||||| || Sbjct 22899 TTAAATAATTCGAAGGGACGTC-TCGATAACGTTATACCTG-CATCATTTGAGTACGTTT 22956 Query 1747 TAGAATTGAAATCCAGATGACCACTCATATAGTTATGTGGGCCTAAAGCACGAGCCCACA 1806 | |||| ||||| | | | | || ||||| ||||||||||| | |||||| || Sbjct 22957 TCAAATTAAAATCAATAAATCTCATTATGTAGTTGTGTGGGCCTAATGAACGAGCTCATG 23016 Query 1807 TTGTTTTGCCAGTTCTAGA 1825 |||||| || |||| || Sbjct 23017 CTGTTTTCCCTATTCTTGA 23035 >seq20728 Length=3653 Score = 109 bits (120), Expect = 9e-21 Identities = 169/235 (72%), Gaps = 5/235 (2%) Strand=Plus/Plus Query 1593 GGGATACCGCCTTTAATTTGAACTGACTTTCCATA-TTTACAGTTGGACTGCCAGTCCCT 1651 || || || ||||||||||||| || ||||| || ||| || |||| ||||| || | Sbjct 1442 GGAATCCCCCCTTTAATTTGAAATGGTTTTCCGTACTTTGCA-TTGGCCTGCC-GTTGCG 1499 Query 1652 CTGGGCCCCAATCAATTCTTTCCAGTGCGTTAGCTTTAAATAATGCGGAGCGACGTCATC 1711 ||| || || | || | || | ||| || ||||||||| ||||| ||||||||| Sbjct 1500 CTGTGCGCCTACGAACTGTTGATAATGCTTTTTAATTAAATAATTCGGAGGGACGTCATC 1559 Query 1712 AATGACGTTATA-CTTGACGTCATTTGAGAACACCCTAGAATTGAAATCCAGATGACCAC 1770 ||||||||||| | || | ||||||||| || | ||||| ||||| | | | Sbjct 1560 GATGACGTTATATCATG-CATCATTTGAGTACGTTTTCGAATTAAAATCTATAAATCTCA 1618 Query 1771 TCATATAGTTATGTGGGCCTAAAGCACGAGCCCACATTGTTTTGCCAGTTCTAGA 1825 | || ||||| |||||| |||| | ||||||||| |||||| || |||| || Sbjct 1619 TTATGTAGTTGTGTGGGACTAATGAACGAGCCCATGCTGTTTTCCCTATTCTTGA 1673 >seq815 Length=151552 Score = 109 bits (120), Expect = 9e-21 Identities = 181/259 (70%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 1568 TCCAGGATTGCACAGCACGATTGAAGGGATACCGCCTTTAATTTGAACTGACTTTCCATA 1627 |||||||||||| || || || || || ||||||||||||||| | | ||| | || Sbjct 85422 TCCAGGATTGCAAAGTACAATACTTGGAATCCCGCCTTTAATTTGACCGGGTTTTTCGTA 85363 Query 1628 -TTTACAGTTGGACTGCCAGTCCCTCTGGGCCCCAATCAATTCTTTCCAGTGCGTTAGCT 1686 ||| || |||| || ||||| | ||| || || | || | || | | | | Sbjct 85362 CTTTGCA-TTGGCCTTCCAGTTGCGCTGTGCGCCTACGAACTATTGATAATACTTCTAAA 85304 Query 1687 TTAAATAATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAACACCC 1746 ||||||||| | ||| |||||| || |||||||||||| | ||||||||| || Sbjct 85303 TTAAATAATTCAGAGAGACGTCGTCGATGACGTTATACCATGCATCATTTGAGTACGTTT 85244 Query 1747 TAGAATTGAAATCCAGATGACCACTCATATAGTTATGTGGGCCTAAAGCACGAGCCCACA 1806 | ||||| ||||||| | || | || ||||| |||| |||||| ||||||||| Sbjct 85243 TGGAATTAAAATCCATAAATCCCATTATGTAGTTGTGTGTGCCTAATAAACGAGCCCATG 85184 Query 1807 TTGTTTTGCCAGTTCTAGA 1825 || |||| || |||| || Sbjct 85183 TTATTTTCCCTATTCTTGA 85165 >seq4295 Length=67413 Score = 102 bits (112), Expect = 1e-18 Identities = 238/351 (68%), Gaps = 11/351 (3%) Strand=Plus/Minus Query 1481 GAAGATGAATTTGGCATTTTTGAGTGTCCACTC--TCTAAGTGCTGCATTTTCAGCTTTG 1538 ||||| ||||| |||||| | |||||| | || |||| | |||| | ||| Sbjct 46937 GAAGAAGAATTCTGCATTTCCTAATGTCCATTTCTTCAAAGT--TAAATTTATATCTTGT 46880 Query 1539 TCGAGGAAATCTTTATAGCTGGCCCCCTC---TCCA-GGATTGCACAGCACGATTGAAGG 1594 ||||| ||| ||||||| | | | || ||| |||||| | ||||||||| | || Sbjct 46879 TCGAGAAAAGCTTTATA-CGAACACTCTGGTGTCCTTGGATTGTAGAGCACGATTCATGG 46821 Query 1595 GATACCGCCTTTAATTTGAACTGACTTTCCATATTTACAGTTGGACTGCCAGTCCCTCTG 1654 ||| || |||||||||||| ||| || || || || || || | ||| | ||| Sbjct 46820 GATTCCCCCTTTAATTTGATCTGGTTTACCGTACTTGGCATTTGAGTTCCAATTGTACTG 46761 Query 1655 GGCCCCAATCAATTCTTTCCAGTGCGTTAGCTTTAAATAATGCGGAGCGACGTCATCAAT 1714 |||| |||| | ||||| || | || || ||||| ||| |||||||| || Sbjct 46760 GGCCACAATGAGCTCTTTTCAATATTTTTTCTGCAAATAGGATAGAGATACGTCATCTAT 46701 Query 1715 GACGTTATACTTGACGTCATTTGAGAACACCCTAGAATTGAAATCCA-GATGACCACTCA 1773 ||||| ||| | | ||| || || | ||||| ||||||| || | ||| | | Sbjct 46700 AACGTTGTACCATGCATTATTCGAAAATGATTTCGAATTAAAATCCATGAAGCCCATT-A 46642 Query 1774 TATAGTTATGTGGGCCTAAAGCACGAGCCCACATTGTTTTGCCAGTTCTAG 1824 | ||||||||||||| ||||| || ||||| ||||| || | |||||| Sbjct 46641 TGTAGTTATGTGGGCATAAAGACCGTGCCCATATTGTCTTTAAAATTCTAG 46591 >seq1010 Length=204159 Score = 98.7 bits (108), Expect = 2e-17 Identities = 186/270 (69%), Gaps = 3/270 (1%) Strand=Plus/Minus Query 1573 GATTGCACAGCACGATTGAAGGGATACCGCCTTTAATTTGAACTGACTTTCCATATTTAC 1632 ||||||| |||||||| | |||| | ||||||||| ||||| || || || ||| Sbjct 40914 GATTGCAGAGCACGATACATAGGATTCTCCCTTTAATTAAAACTGGTTTACCGTACTTAG 40855 Query 1633 AGTTGGACTGCCAGTCCCTCTGGGCCCCAATCAATTCTTTCCAGTGCGTTAGCTTT-AAA 1691 || || ||||| | |||| ||| ||| | |||||||| || || || ||| Sbjct 40854 CATTTGATTGCCAATTGTACTGGACCCTAATGAGCTCTTTCCAATGATTTTTTTTGCAAA 40795 Query 1692 TAATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAACACCCTAGAA 1751 || ||| |||||||| || || |||||| | | ||| || || | ||| Sbjct 40794 TAGGATAGAGACACGTCATCTATAACATTATACCATGCATTATTCGAAAATGATTTTGAA 40735 Query 1752 TTGAAATCCA-GATGACCACTCATATAGTTATGTGGGCCTAAAGCACGAGCCCACATTGT 1810 || ||||| | || | ||| | || ||||||||||||||||||| || |||| ||||| Sbjct 40734 TTAAAATCTATGAAGCCCATT-ATGTAGTTATGTGGGCCTAAAGATCGTTCCCATATTGT 40676 Query 1811 TTTGCCAGTTCTAGAATCACCTTCGACTAT 1840 || ||| |||||| |||||| | ||| Sbjct 40675 CTTTCCAATTCTAGTTGGACCTTCTAATAT 40646 Score = 95.1 bits (104), Expect = 2e-16 Identities = 198/289 (69%), Gaps = 6/289 (2%) Strand=Plus/Plus Query 1569 CCAGGATTGCACAGCACGATTGAAGGGATACCGCCTTTAATTTGAACTGACTTTCCATAT 1628 || |||||||| |||||||| | ||||| | |||||||||||||| || || || Sbjct 36484 CCTGGATTGCAGAGCACGATACATGGGATTTCCTCTTTAATTTGAACTAGTTTACCGTAC 36543 Query 1629 TT-ACAGTTGGACTGCCAGTCCCTCTGGGCCCCAATCAATTCTTTCCAGTGCGTTAGCTT 1687 || ||| || | ||||| | || ||||| ||||| |||||||| | || | Sbjct 36544 TTGACATGTG-ATTGCCAATTGTGCTAGGCCCTAATCAGCTCTTTCCAATTTTTTT--TG 36600 Query 1688 TAAATAATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAACACCCT 1747 ||||| ||| || ||||| |||| |||||| | | | | || || | Sbjct 36601 CAAATAGGATCGAGACACATCATCTATGAAATTATACCATGCATTAATCGAAAATGATTT 36660 Query 1748 AGAATTGAAATCCA-GATGACCACTCATATAGTTATGTGGGCCTAAAGCACGAGCCCACA 1806 ||||| ||||||| || | ||| | || |||||| |||||||||||| || ||||| | Sbjct 36661 CGAATTAAAATCCATGAAGCCCATT-ATGTAGTTACGTGGGCCTAAAGATCGTGCCCATA 36719 Query 1807 TTGTTTTGCCAGTTCTAGAATCACCTTCGACTATTACACTAATAGGTCT 1855 |||| || ||| |||||| ||||| | ||| | ||| |||| || Sbjct 36720 TTGTCTTCCCAATTCTAGCTGGGCCTTCTAATATGAGACTCTTAGGCCT 36768 >seq490 Length=137872 Score = 93.3 bits (102), Expect = 7e-16 Identities = 262/393 (67%), Gaps = 11/393 (3%) Strand=Plus/Minus Query 1457 GCTTTGATAGAGGGGGCAGTTGAGGAAGATGAATTTGGCATTTTTGAGTGTCCACTCTCT 1516 |||| ||||| |||| |||| ||| ||||| |||||| | ||||||||||| Sbjct 70738 GCTTCTATAGAAGGGGGTGTTGGCGAAATAGAATTCTGCATTTGCAATCGTCCACTCTCT 70679 Query 1517 AAGTGCTGCATTTTCAGCTTTGTCGAGGAAATCTTTATAGCTG--GCCCCCTCTC-CAGG 1573 | ||||| || || || | ||| |||||| | ||| ||| || Sbjct 70678 TATATACGCATTAACATTCTTATCCAAGAATGATTTATAAGAGTAGCCTGTACTCTCATT 70619 Query 1574 ATTGCACAGCACGATTGAAGGGATACCGCCTTTAATTTGAACTGACTTTCCATATTTACA 1633 |||||| || || ||||| || || || ||||||||||| | || ||| ||||||| | Sbjct 70618 ATTGCATAGGACAATTGATGGTATTCCACCTTTAATTTGTATTGGCTTAGCATATTTTGA 70559 Query 1634 GTTGGACTGCCAGTCCCTCTGGGCCCCAATCAATTCTTTCCAGTGCGTTAGCTT-TAAAT 1692 | | |||||| || ||||||||| | || |||| ||| | ||| | | Sbjct 70558 ATCAGCTTGCCAGCTATGCTTGGCCCCAATAAGCTCCCTCCAATGCTT---CTTCCAGAG 70502 Query 1693 A-ATGC-GGAGCGACGTCATCAATGACGTTATA-CTTGACGTCATTTGAGAACACCCTAG 1749 | |||| |||| ||||||||| ||||||||||| | |||| ||||| || || | | Sbjct 70501 AGATGCTGGAGGGACGTCATCTATGACGTTATACCATGAC-TCATTGGAAAATGTCTTTC 70443 Query 1750 AATTGAAATCCAGATGACCACTCATATAGTTATGTGGGCCTAAAGCACGAGCCCACATTG 1809 ||||||||||| | || | | || |||||||| || ||| | |||||| | Sbjct 70442 TATTGAAATCCATAACGCCCATAAAGTAATTATGTGGACCCAAACTTCTAGCCCATTCAG 70383 Query 1810 TTTTGCCAGTTCTAGAATCACCTTCGACTATTA 1842 | || ||| |||||| |||||| | |||| Sbjct 70382 TCTTCCCAAGTCTAGATGGACCTTCTATAATTA 70350 >seq3059 Length=182465 Score = 82.4 bits (90), Expect = 1e-12 Identities = 109/149 (73%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 1568 TCCAGGATTGCACAGCACGATTGAAGGGATACCGCCTTTAATTTGAACTGACTTTCCAT- 1626 |||||||||||| || ||||| || || |||||||||||||||| || ||||| | Sbjct 20417 TCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAATTGGTTTTCCGTA 20358 Query 1627 ATTTACAGTTGGACTGCCAGTCCCTCTGGGCCCCAATCAATTCTTTCCAGTGCGTTAGCT 1686 |||| || |||| || ||||| | ||| || || | || | || | ||| | Sbjct 20357 ATTTGCA-TTGGCCTACCAGTTGCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTAA 20299 Query 1687 TTAAATAATGCGGAGCGACGTCATCAATG 1715 ||||||||| ||||| |||||| |||||| Sbjct 20298 TTAAATAATTCGGAGGGACGTCGTCAATG 20270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8404798612210