Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_004090.1 Length=2768 Score E Sequences producing significant alignments: (Bits) Value seq3283 131 3e-27 seq3439 125 1e-25 seq22495 107 3e-20 seq4104 102 1e-18 seq77518 100 5e-18 seq35612 98.7 2e-17 seq5745 98.7 2e-17 seq80468 96.9 6e-17 seq815 95.1 2e-16 seq442 93.3 7e-16 seq33 91.5 3e-15 seq953 89.7 9e-15 seq1010 87.8 3e-14 seq30129 82.4 1e-12 seq3059 80.6 5e-12 seq54129 78.8 2e-11 seq27608 78.8 2e-11 seq4295 78.8 2e-11 seq5493 77.0 6e-11 >seq3283 Length=49157 Score = 131 bits (144), Expect = 3e-27 Identities = 233/334 (70%), Gaps = 12/334 (4%) Strand=Plus/Minus Query 1630 GAATTCTGCATTCTTTAATGCCCAATCTTTTAAAGCTGAATTTTTATCCTCATTCAAGTA 1689 |||||||||||| | || | |||| ||| || |||||| ||| || |||| | Sbjct 2362 GAATTCTGCATTTTGTAGAGTCCAAGTTTTCCAATATGAATTGGACTCCAAATCCAAGAA 2303 Query 1690 CTCTTTATATGAT-GATGTTGGTCCTGGATTGCAAAGGAAGATAGTTGGGATTCCACCTT 1748 | |||||| ||| ||| ||||| ||||||||||| | |||| |||| || || |||| Sbjct 2302 CGTTTTATAGGATTGATCA-GGTCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTT 2244 Query 1749 TAATTTGAACTGGCTTCCCGTACTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATAA 1808 ||||||||||||| ||||||||||| | ||| ||||| | | || || || | | Sbjct 2243 TAATTTGAACTGGTTTCCCGTACTTTGCATTGGCCTGCCAATTTCGCTGTGCGCCTACGA 2184 Query 1809 ATTCTTTAAAGTGCT------TTAGATAGTGCGGGTCTACGTCATCAATGACGTTATACC 1862 | | || | | |||| ||| ||| | ||| ||||| || ||||||||||||| Sbjct 2183 ACTGTTGATAATGCTTCTTAATTAAATAATTCGGAGGGACGTCGTCGATGACGTTATACC 2124 Query 1863 AAGCATCATTACTGTATAC-TTTAGGGCTT-AGATCAAGATGTCCACACAAATAATTGTG 1920 | |||||||| || ||| ||| || || | ||| | | ||| | || ||||| Sbjct 2123 ATGCATCATT--TGAGTACGTTTTGGAATTAAAATCCATAAATCCCATTATGTAGTTGTG 2066 Query 1921 TGGTCCCAATGATCTGGCCCACATTGTTTTACCT 1954 ||| || ||||| | ||||| |||||| ||| Sbjct 2065 TGGGCCTAATGAACGAGCCCATGCTGTTTTCCCT 2032 >seq3439 Length=62978 Score = 125 bits (138), Expect = 1e-25 Identities = 229/332 (69%), Gaps = 10/332 (3%) Strand=Plus/Minus Query 1631 AATTCTGCATTCTTTAATGCCCAATCTTTTAAAGCTGAATTTTTATCCTCATTCAAGTAC 1690 ||||||||||| | || | |||| ||| || |||||| ||| || ||| || Sbjct 1041 AATTCTGCATTTTGTAGAGTCCAAGTTTTCCAATATGAATTGGACTCCAAATCTAAGAAC 982 Query 1691 TCTTTATATGATGATGTTGGTCCTGGATTGCAAAGGAAGATAGTTGGGATTCCACCTTTA 1750 |||||| ||| || ||||| |||||||||| | |||| |||| || || |||||| Sbjct 981 GTTTTATAGGATAATTCAGGTCCAAGATTGCAAAGTACGATACTTGGAATCCCGCCTTTA 922 Query 1751 ATTTGAACTGGCTTCCCGTACTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATAAAT 1810 ||||||||||| || |||||||| | |||| ||||| | | || || || | || Sbjct 921 ATTTGAACTGGTTTTCCGTACTTTGCGTTGGCATGCCAATTTCGCTGTGCGCCTACGAAC 862 Query 1811 TCTTTAAAGTGCT------TTAGATAGTGCGGGTCTACGTCATCAATGACGTTATACCAA 1864 | || | | |||| ||| ||| | ||| || ||||| |||||||||||||| Sbjct 861 TGTTGATAATGCTTCTTAATTAAATAATTCGGAGGGACATCATCGATGACGTTATACCAT 802 Query 1865 GCATCATTACTGTATAC-TTTAGGGCTT-AGATCAAGATGTCCACACAAATAATTGTGTG 1922 |||||||| || ||| ||| || || | ||| | | ||| | || ||||||| Sbjct 801 GCATCATT--TGAGTACGTTTTGGAATTAAAATCCATAAATCCCATTATGTAGTTGTGTG 744 Query 1923 GTCCCAATGATCTGGCCCACATTGTTTTACCT 1954 | || ||||| | ||||| |||||| ||| Sbjct 743 GGCCTAATGAACGAGCCCATGCTGTTTTCCCT 712 >seq22495 Length=567 Score = 107 bits (118), Expect = 3e-20 Identities = 173/249 (69%), Gaps = 6/249 (2%) Strand=Plus/Minus Query 1630 GAATTCTGCATTCTTTAATGCCCAATCTTTTAAAGCTGAATTTTTATCCTCATTCAAGTA 1689 ||||||| |||| | ||| | |||| ||| || |||||| ||| || ||| | Sbjct 449 GAATTCTACATTTTGTAAAGTCCAAGTTTTCCAATATGAATTGGACTCCAAATCTAAGAA 390 Query 1690 CTCTTTATATGATGATGTTGGTCCTGGATTGCAAAGGAAGATAGTTGGGATTCCACCTTT 1749 |||||| ||| | ||||| ||||||||||| | |||| || | || || | ||| Sbjct 389 TGTTTTATAGGATAAATCAGGTCCAGGATTGCAAAGTACGATACTTAGAATCCCGCATTT 330 Query 1750 AATTTGAACTGGCTTCCCGTACTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATAAA 1809 |||||||||||| || |||||||| | ||| ||||||| | || || || | || Sbjct 329 AATTTGAACTGGTTTTCCGTACTTTGCATTGGCCTGCCAGTTGCGCTGTGCGCCTACGAA 270 Query 1810 TTCTTTAAAGTGCT------TTAGATAGTGCGGGTCTACGTCATCAATGACGTTATACCA 1863 | || | | |||| ||| ||| | ||| | |||||| |||||||||||||| Sbjct 269 CTGTTGACAATGCTTCTTAATTAAATAATTCGGAGGGATGTCATCGATGACGTTATACCA 210 Query 1864 AGCATCATT 1872 |||||||| Sbjct 209 TGCATCATT 201 >seq4104 Length=64936 Score = 102 bits (112), Expect = 1e-18 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1613 GGGCTGTTGAGGGTGATGAATTCTGCATTCTTTAATGCCCAATCTTTTAAAGCTGAATTT 1672 ||| |||||| | | |||||||||||| | || | |||| ||| || |||||| Sbjct 20926 GGGGTGTTGACGAAGTGGAATTCTGCATTTTGTAGAGTCCAAGTTTTCCAATATGAATTG 20867 Query 1673 TTATCCTCATTCAAGTACTCTTTATATGATGATGTTGGTCCTGGATTGCAAAGGAAGATA 1732 ||| || |||| || |||||| ||| | ||||| ||||||||||| | |||| Sbjct 20866 GACTCCAAATCCAAGAACGTTTTATAGGATAAATCGGGTCCAGGATTGCAAAGTACGATA 20807 Query 1733 GTTGGGATTCCACCTTTAATTTGAACTGGCTTCCCGTACTT 1773 |||| || || ||||||||||||||||| || |||||||| Sbjct 20806 CTTGGAATCCCGCCTTTAATTTGAACTGGTTTTCCGTACTT 20766 >seq77518 Length=14724 Score = 100 bits (110), Expect = 5e-18 Identities = 222/333 (67%), Gaps = 9/333 (3%) Strand=Plus/Minus Query 1630 GAATTCTGCATTCTTTAATGCCCAATCTTTTAAAGCTGAATTTTTATCCTCATTCAAGTA 1689 |||||||||||| | ||| | ||| |||| || ||||||| ||| || |||| | Sbjct 2485 GAATTCTGCATTTTGTAAAGTCCACGATTTTCAATTTGAATTTGAATCTAAATCCAAGAA 2426 Query 1690 CTCTTTATATGATGATGTTGGTCCT---GGATTGCAAAGGAAGATAGTTGGGATTCCACC 1746 ||||||| ||| | ||| || ||||||||||| | |||| ||| || || || Sbjct 2425 TGCTTTATAAGATAAATCTGGACCCCCAGGATTGCAAAGTACGATACATGGAATCCCGCC 2366 Query 1747 TTTAATTTGAACTGGCTTCCCGTACTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCAT 1806 |||||||||||||| || ||||||| | || || |||| | ||| || || | Sbjct 2365 TTTAATTTGAACTGATTTTTCGTACTTTGCATTTGACTGTCAGTTGCGTTGTGCTCCTAC 2306 Query 1807 AAATTCTTTAAAGTGCT------TTAGATAGTGCGGGTCTACGTCATCAATGACGTTATA 1860 || | || | | |||| ||| ||| || || ||||||||||||||||| Sbjct 2305 GAACTGTTGATAATGCTTTTTAATTAAATAAGCTGGAGGGACATCATCAATGACGTTATA 2246 Query 1861 CCAAGCATCATTACTGTATACTTTAGGGCTTAGATCAAGATGTCCACACAAATAATTGTG 1920 ||| || || || |||| ||| | | ||| | | || | |||||| || Sbjct 2245 CCACGCGTCGTTCGAGTATGTTTTCAAATTCAAATCCATAAAGCCCATTATATAATTATG 2186 Query 1921 TGGTCCCAATGATCTGGCCCACATTGTTTTACC 1953 ||| ||||| | | ||||| | ||||||||| Sbjct 2185 TGGACCCAACTAACGTGCCCAAACTGTTTTACC 2153 >seq35612 Length=1588 Score = 98.7 bits (108), Expect = 2e-17 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 1630 GAATTCTGCATTCTTTAATGCCCAATCTTTTAAAGCTGAATTTTTATCCTCATTCAAGTA 1689 |||||||||||| | || | |||| ||| || |||||| ||| || |||| | Sbjct 1428 GAATTCTGCATTTTGTAGAGTCCAAGTTTTCCAATATGAATTGGACTCCAAATCCAAGAA 1487 Query 1690 CTCTTTATATGATGATGTTGGTCCTGGATTGCAAAGGAAGATAGTTGGGATTCCACCTTT 1749 |||||| ||| | ||||| ||||||||||| | |||| |||| || || ||||| Sbjct 1488 TGTTTTATAGGATAAATCAGGTCCAGGATTGCAAAGTACGATACTTGGAATGCCGCCTTT 1547 Query 1750 AATTTGAACTGGCTTCCCGTACTTAGTGTTGCTTTGCCA 1788 |||||||||||| || |||||||| | |||| ||||| Sbjct 1548 AATTTGAACTGGTTTTCCGTACTTTGCGTTGGCCTGCCA 1586 >seq5745 Length=45059 Score = 98.7 bits (108), Expect = 2e-17 Identities = 221/332 (67%), Gaps = 9/332 (3%) Strand=Plus/Plus Query 1631 AATTCTGCATTCTTTAATGCCCAATCTTTTAAAGCTGAATTTTTATCCTCATTCAAGTAC 1690 ||||| ||||| | ||| | | | ||| || ||||||| ||| || ||| || Sbjct 43457 AATTCAGCATTTTGTAAAGTCAACGATTTCTAATTTGAATTTGAATCTATATCTAAGAAC 43516 Query 1691 TCTTTATATGATGATGTTGGTCCT---GGATTGCAAAGGAAGATAGTTGGGATTCCACCT 1747 ||||||| ||| | ||| || |||||||||| | |||| ||| || |||||| Sbjct 43517 GCTTTATAAGATAAATCTGGACCCCCAGGATTGCAAATCACGATACATGGAATCCCACCT 43576 Query 1748 TTAATTTGAACTGGCTTCCCGTACTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATA 1807 |||||||||||||| || |||||||| | || ||||| | | ||| || || || Sbjct 43577 TTAATTTGAACTGGTTTGCCGTACTTTGCATTTGACTGCCAATTGCATTGTGCTCCTATG 43636 Query 1808 AATTCTTTAAAGTGCT------TTAGATAGTGCGGGTCTACGTCATCAATGACGTTATAC 1861 || | || | | || | ||| ||| || | ||||||||||||||||||| Sbjct 43637 AACTGTTGATAATGTTTTTTAATTAAATAAGCTGGAGGGATGTCATCAATGACGTTATAC 43696 Query 1862 CAAGCATCATTACTGTATACTTTAGGGCTTAGATCAAGATGTCCACACAAATAATTGTGT 1921 || || || || ||| ||| | | | ||| | | || | |||||| ||| Sbjct 43697 CATGCGTCGTTCGATTATGTTTTCGAATTCAAATCCATAAAGCCCATTATATAATTATGT 43756 Query 1922 GGTCCCAATGATCTGGCCCACATTGTTTTACC 1953 || ||||| || | ||||| | ||||||||| Sbjct 43757 GGACCCAACGAACGTGCCCAAACTGTTTTACC 43788 >seq80468 Length=4946 Score = 96.9 bits (106), Expect = 6e-17 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 1630 GAATTCTGCATTCTTTAATGCCCAATCTTTTAAAGCTGAATTTTTATCCTCATTCAAGTA 1689 |||||||||||| | ||| | |||| ||| || |||||| ||| ||||||| | Sbjct 4187 GAATTCTGCATTTTGTAAAGTCCAAGTTTTCCAATATGAATTGGACTCCATATTCAAGAA 4246 Query 1690 CTCTTTATATGATGATGTTGGTCCTGGATTGCAAAGGAAGATAGTTGGGATTCCACCTTT 1749 |||||| ||| | ||||| |||||||||| | |||| |||| ||||| ||||| Sbjct 4247 TGTTTTATAGGATAAATCAGGTCCAAGATTGCAAAGTACGATACTTGGAATTCCGCCTTT 4306 Query 1750 AATTTGAACTGGCTTCCCGTACTTAGTGTTG 1780 ||| ||||| || || |||||||| || ||| Sbjct 4307 AATCTGAACAGGTTTTCCGTACTTTGTATTG 4337 >seq815 Length=151552 Score = 95.1 bits (104), Expect = 2e-16 Identities = 171/249 (69%), Gaps = 7/249 (3%) Strand=Plus/Minus Query 1630 GAATTCTGCATTCTTTAATGCCCAATCTTTTAAAGCTGAATTTTTATCCTCATTCAAGTA 1689 ||||||| |||| | || | |||| ||| || ||||||| ||| |||||| | Sbjct 85502 GAATTCTACATTTTGTAGAGTCCAAGTTTTCCAATATGAATTTGACTCCAAATTCAATAA 85443 Query 1690 CTCTTTATATGATGATGTTGGTCCTGGATTGCAAAGGAAGATAGTTGGGATTCCACCTTT 1749 | |||||| ||| || ||||| ||||||||||| | ||| |||| || || ||||| Sbjct 85442 CGTTTTATAGGATAATCA-GGTCCAGGATTGCAAAGTACAATACTTGGAATCCCGCCTTT 85384 Query 1750 AATTTGAACTGGCTTCCCGTACTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATAAA 1809 ||||||| | || || ||||||| | ||| | ||||| | || || || | || Sbjct 85383 AATTTGACCGGGTTTTTCGTACTTTGCATTGGCCTTCCAGTTGCGCTGTGCGCCTACGAA 85324 Query 1810 TTCTTTAAAGTGCT------TTAGATAGTGCGGGTCTACGTCATCAATGACGTTATACCA 1863 | || | | | || ||| ||| | | | ||||| || |||||||||||||| Sbjct 85323 CTATTGATAATACTTCTAAATTAAATAATTCAGAGAGACGTCGTCGATGACGTTATACCA 85264 Query 1864 AGCATCATT 1872 |||||||| Sbjct 85263 TGCATCATT 85255 >seq442 Length=237535 Score = 93.3 bits (102), Expect = 7e-16 Identities = 185/270 (69%), Gaps = 12/270 (4%) Strand=Plus/Plus Query 1611 ATGGGCTGTTGAGG--GTGATGAATTCTGCATTCTTTAATGCCCAATCTTTTAAAGCTGA 1668 ||||| ||| || | |||| ||||||| ||| | ||| | |||| ||| || ||| Sbjct 22680 ATGGGGTGTCGATGAAGTGA--AATTCTGTATTTTGTAAAGTCCAAGTTTTCCAATATGA 22737 Query 1669 ATTTTTATCCTCATTCAAGTACTCTTTATATGATGATGTTGGTCCTGGATTGCAAAGGAA 1728 ||| ||| || |||| | |||||| ||| | | ||||| ||||||||||| Sbjct 22738 ATTGGAATCTAAATCCAAGAATGTTTTATAGGATAAATTAGGTCCAGGATTGCAAAGTTC 22797 Query 1729 GATAGTTGGGATTCCACCTTTAATTTGAACTGGCTTCCCGTACTTAGTGTTGCTTTGCCA 1788 |||| |||| || | |||||||||||||||| || |||||||| | ||| ||| | Sbjct 22798 GATACTTGGAATCTCGCCTTTAATTTGAACTGATTTTCCGTACTTTGCATTGGCCTGCTA 22857 Query 1789 GTCCCTTTGGGCCCCCATAAATTCTTTAAAGTGCT------TTAGATAGTGCGGGTCTAC 1842 || | ||| || || | || | || | | |||| ||| ||| | || || Sbjct 22858 GTGTCGTTGTGCGCCTACGAACTGTTAATAATGCTTTTTAATTAAATAATTCGAAGGGAC 22917 Query 1843 GTCATCAATGACGTTATACCAAGCATCATT 1872 ||| || || |||||||||| |||||||| Sbjct 22918 GTC-TCGATAACGTTATACC-TGCATCATT 22945 >seq33 Length=454124 Score = 91.5 bits (100), Expect = 3e-15 Identities = 218/329 (66%), Gaps = 8/329 (2%) Strand=Plus/Minus Query 1630 GAATTCTGCATTCTTTAATGCCCAATCTTTTAAAGCTGAATTTTTATCCTCATTCAAGTA 1689 |||||||||||||| ||| | ||| ||| || ||||||| ||| || ||| | Sbjct 403386 GAATTCTGCATTCTGTAAAGTCCACGATTTCCAATTTGAATTTGAATCTATATCGAAGAA 403327 Query 1690 CTCTTTATATGATGATGTTGGTCCT--GGATTGCAAAGGAAGATAGTTGGGATTCCACCT 1747 | ||||||| || | ||| || ||||||||||| | |||| ||| || || | | Sbjct 403326 CGCTTTATAAGACAACTCTGGACCCCAGGATTGCAAAGCACGATACATGGAATCCCGCTT 403267 Query 1748 TTAATTTGAACTGGCTTCCCGTACTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATA 1807 |||||||||||||| || |||||||| | || ||||||| | || | || | Sbjct 403266 TTAATTTGAACTGGTTTTCCGTACTTTGCATTTGACTGCCAGTTGCACTGTACGCCTACG 403207 Query 1808 AATTCTTTAAAGTGCT------TTAGATAGTGCGGGTCTACGTCATCAATGACGTTATAC 1861 || | || | | || | ||| ||| || ||||||||||||||||||||| Sbjct 403206 AACTGTTGATAATGATTTTTAATTAAATAAGCTGGAGGGACGTCATCAATGACGTTATAC 403147 Query 1862 CAAGCATCATTACTGTATACTTTAGGGCTTAGATCAAGATGTCCACACAAATAATTGTGT 1921 || || || || |||| | | | | | ||| | | || | ||||| ||| Sbjct 403146 CACGCGTCGTTCGAGTATGTTCTCGAATTCAAATCCATAAAGCCCATTATGTAATTATGT 403087 Query 1922 GGTCCCAATGATCTGGCCCACATTGTTTT 1950 || ||||| || | ||||| | |||||| Sbjct 403086 GGACCCAACGAACGTGCCCAAACTGTTTT 403058 >seq953 Length=224861 Score = 89.7 bits (98), Expect = 9e-15 Identities = 169/249 (68%), Gaps = 6/249 (2%) Strand=Plus/Plus Query 1630 GAATTCTGCATTCTTTAATGCCCAATCTTTTAAAGCTGAATTTTTATCCTCATTCAAGTA 1689 |||||||||||| | ||| | |||| ||| || |||||| ||| || ||| | Sbjct 1761 GAATTCTGCATTTTGTAAAGTCCAAGTTTTCCAATATGAATTGGAATCTAAATCTAAGAA 1820 Query 1690 CTCTTTATATGATGATGTTGGTCCTGGATTGCAAAGGAAGATAGTTGGGATTCCACCTTT 1749 |||||| ||| | ||||| |||||||||| | |||| |||| || || ||||| Sbjct 1821 TGTTTTATAGGATAAATCAGGTCCAGGATTGCAAAATACGATACTTGGAATCCCGCCTTT 1880 Query 1750 AATTTGAACTGGCTTCCCGTACTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATAAA 1809 |||||||| || || |||||||| | ||| ||||| | | || | || | || Sbjct 1881 AATTTGAATTGATTTTCCGTACTTTGCATTGACCTGCCAATGTCGCTGTACGCCTACGAA 1940 Query 1810 TTCTTTAAAGTGCT------TTAGATAGTGCGGGTCTACGTCATCAATGACGTTATACCA 1863 | || | | | || ||| ||| | ||| ||||| || || ||||||||||| Sbjct 1941 CTGTTGATAATACTTTTTAATTAAATAATTCGGAGGGACGTCGTCGATAACGTTATACCA 2000 Query 1864 AGCATCATT 1872 |||||||| Sbjct 2001 TGCATCATT 2009 >seq1010 Length=204159 Score = 87.8 bits (96), Expect = 3e-14 Identities = 133/186 (72%), Gaps = 5/186 (3%) Strand=Plus/Minus Query 1607 TACAATGGGCTGTTGAGGGTGATGAATTCTGCATTCTTTAATGCCCAATCTTTTAAAGCT 1666 || || ||| ||| |||| || |||||||||||| |||||| ||| | || |||| | Sbjct 41026 TAGAAAGGGGTGTCGAGGAAGAAGAATTCTGCATTTCTTAATGTCCATTTCTTCAAAGTT 40967 Query 1667 GAATTTTTATCCTCATTCAAG-TACTCTTTATATGATGATGTTGGT---CCTGGATTGCA 1722 ||||| ||| | ||| || | |||||| || || | ||| ||| ||||||| Sbjct 40966 AAATTTACATCAT-GTTCTAGAAAAGATTTATACGAATATTTGGGTGTCCCTAGATTGCA 40908 Query 1723 AAGGAAGATAGTTGGGATTCCACCTTTAATTTGAACTGGCTTCCCGTACTTAGTGTTGCT 1782 || | |||| | |||||| ||||||||| |||||| || |||||||||| || Sbjct 40907 GAGCACGATACATAGGATTCTCCCTTTAATTAAAACTGGTTTACCGTACTTAGCATTTGA 40848 Query 1783 TTGCCA 1788 |||||| Sbjct 40847 TTGCCA 40842 >seq30129 Length=3650 Score = 82.4 bits (90), Expect = 1e-12 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 1631 AATTCTGCATTCTTTAATGCCCAATCTTTTAAAGCTGAATTTTTATCCTCATTCAAGTAC 1690 ||||||||||| | || | | || ||| || |||||| ||| || |||| || Sbjct 2293 AATTCTGCATTTTGTAGAGTCTAAGTTTTCCAATATGAATTGGACTCCAAATCCAAGAAC 2352 Query 1691 TCTTTATATGATGATGTTGGTCCTGGATTGCAAAGGAAGATAGTTGGGATTCCACCTTTA 1750 ||| || ||| | ||||| ||||||||||| | |||| |||| || || |||||| Sbjct 2353 GTTTTTTAGGATAAATCAGGTCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTA 2412 Query 1751 ATTTGAACTGGCTTCCCGTACTT 1773 ||||||||| | || |||||||| Sbjct 2413 ATTTGAACTCGTTTTCCGTACTT 2435 >seq3059 Length=182465 Score = 80.6 bits (88), Expect = 5e-12 Identities = 104/144 (72%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 1630 GAATTCTGCATTCTTTAATGCCCAATCTTTTAAAGCTGAATTTTTATCCTCATTCAAGTA 1689 ||||||| |||| | || | |||| ||| || |||||| ||| || |||| | Sbjct 20498 GAATTCTACATTTTGTAGAGTCCAAGTTTTCCAATATGAATTGGACTCCAAATCCAAGAA 20439 Query 1690 CTCTTTATATGATGATGTTGGTCCTGGATTGCAAAGGAAGATAGTTGGGATTCCACCTTT 1749 | ||||| ||| | ||||| ||||||||||| | |||| |||| || || ||||| Sbjct 20438 CGTTTTATCGGATAAATCAGGTCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTT 20379 Query 1750 AATTTGAACTGGCTTCCCGTACTT 1773 |||||||| ||| || ||||| || Sbjct 20378 AATTTGAATTGGTTTTCCGTAATT 20355 >seq54129 Length=2260 Score = 78.8 bits (86), Expect = 2e-11 Identities = 119/170 (70%), Gaps = 6/170 (4%) Strand=Plus/Minus Query 1709 GGTCCTGGATTGCAAAGGAAGATAGTTGGGATTCCACCTTTAATTTGAACTGGCTTCCCG 1768 ||||| ||||||||||| | |||| |||| || || ||||||||||||| ||| || ||| Sbjct 2260 GGTCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAATTGGTTTTCCG 2201 Query 1769 TACTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATAAATTCTTTAAAGTGCT----- 1823 ||||| | ||| || |||| || || || | || | || | |||| Sbjct 2200 TACTTTGCATTGGCCTGTCAGTTGTGCTGTGCGCCTACGAACTGTTGGTAATGCTTCTTA 2141 Query 1824 -TTAGATAGTGCGGGTCTACGTCATCAATGACGTTATACCAAGCATCATT 1872 ||| ||| | ||| || || || |||||||||||||| ||||||| Sbjct 2140 ATTAAATAATTCGGAGGGACATCGTCGATGACGTTATACCATACATCATT 2091 >seq27608 Length=1821 Score = 78.8 bits (86), Expect = 2e-11 Identities = 94/128 (73%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 1630 GAATTCTGCATTCTTTAATGCCCAATCTTTTAAAGCTGAATTTTTATCCTCATTCAAGTA 1689 |||||||||||| | || | |||| ||| || |||||| ||| || |||| | Sbjct 1694 GAATTCTGCATTTTGTAGAGTCCAAGTTTTCCAATATGAATTGGACTCCAAATCCAAGAA 1753 Query 1690 CTCTTTATATGATGATGTTGGTCCTGGATTGCAAAGGAAGATAGTTGGGATTCCACCTTT 1749 | |||||| ||| | ||||| ||||||||||| | |||| |||| || || ||||| Sbjct 1754 CGTTTTATAGGATAAATCAGGTCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTT 1813 Query 1750 AATTTGAA 1757 |||||||| Sbjct 1814 AATTTGAA 1821 >seq4295 Length=67413 Score = 78.8 bits (86), Expect = 2e-11 Identities = 110/151 (73%), Gaps = 5/151 (3%) Strand=Plus/Minus Query 1627 GATGAATTCTGCATTCTTTAATGCCCAATCTTTTAAAGCTGAATTTTTATCCTCATTCAA 1686 || |||||||||||| ||||| ||| | || |||| | ||||| |||| | ||| | Sbjct 46934 GAAGAATTCTGCATTTCCTAATGTCCATTTCTTCAAAGTTAAATTTATATCTTG-TTCGA 46876 Query 1687 GTACT-CTTTATATGATGATGTTGGT---CCTGGATTGCAAAGGAAGATAGTTGGGATTC 1742 | | ||||||| || | |||| | ||||||| | || | ||| |||||||| Sbjct 46875 GAAAAGCTTTATACGAACACTCTGGTGTCCTTGGATTGTAGAGCACGATTCATGGGATTC 46816 Query 1743 CACCTTTAATTTGAACTGGCTTCCCGTACTT 1773 | |||||||||||| |||| || |||||||| Sbjct 46815 CCCCTTTAATTTGATCTGGTTTACCGTACTT 46785 >seq5493 Length=32325 Score = 77.0 bits (84), Expect = 6e-11 Identities = 140/199 (70%), Gaps = 7/199 (4%) Strand=Plus/Minus Query 1682 TTCAAGTACT-CTTTATATGATGATGTT--GGTCC-TGGATTGCAAAGGAAGATAGTTGG 1737 |||||| | | ||||||| || || | ||| | ||||||||| | | ||| || Sbjct 31596 TTCAAGAAATGCTTTATAGGAATATTCTCCGGTGCATGGATTGCACATCACAATACATGT 31537 Query 1738 GATTCCACCTTTAATTTGAACTGGCTTCCCGTACTTAGTGTTGCTTTGCCAGTCCCTTTG 1797 |||||||| ||||||||||||||| || |||||||| || |||||||| ||| Sbjct 31536 GATTCCACTTTTAATTTGAACTGGTTTACCGTACTTCACATTTGATTGCCAGTTGTATTG 31477 Query 1798 GGCCCCCATAAATTCTTTAAAG-TGCTTT--AGATAGTGCGGGTCTACGTCATCAATGAC 1854 | || | | ||||| || | |||| ||||| ||| |||||||||||||| Sbjct 31476 AGACCTAAGTAGCTCTTTCCAGCTTCTTTGCAGATATGTCGGTGATACGTCATCAATGAT 31417 Query 1855 GTTATACCAAGCATCATTA 1873 ||| ||||| ||| |||| Sbjct 31416 GTTGTACCATGCACGATTA 31398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8737037442675