Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_004732.1 Length=2662 Score E Sequences producing significant alignments: (Bits) Value seq5745 127 3e-26 seq33 122 1e-24 seq3283 120 5e-24 seq3439 116 6e-23 seq22495 111 3e-21 seq4295 111 3e-21 seq1993 104 4e-19 seq442 104 4e-19 seq77518 102 1e-18 seq54129 102 1e-18 seq20728 98.7 2e-17 seq1010 96.9 6e-17 seq815 96.9 6e-17 seq490 95.1 2e-16 seq953 93.3 7e-16 seq3059 77.0 5e-11 >seq5745 Length=45059 Score = 127 bits (140), Expect = 3e-26 Identities = 255/374 (68%), Gaps = 17/374 (5%) Strand=Plus/Plus Query 1464 ATAGAGGGGGCAGTCGAGGAAGATGAATTGGGCATTTTTTAGTGTCCAC--TCTCTTAGT 1521 |||||| ||| ||||| |||| |||| ||||||| || ||| || | ||| | | Sbjct 43432 ATAGAGAGGGGTGTCGATGAAGTGTAATTCAGCATTTTGTAAAGTCAACGATTTCTAATT 43491 Query 1522 GCTGCATTTTCAGCTTTGTCGAGAAACTCTTTATAG-------CTGGCCCCCTCTCCGGG 1574 || |||| | || | || | ||| ||||||| |||| |||| | || Sbjct 43492 --TGAATTTGAATCTATATCTAAGAACGCTTTATAAGATAAATCTGGACCCC----CAGG 43545 Query 1575 ATTGCAAAGCACTATTGATGGGATTCCACCTTTAATTTGAACCGGCTTTCCATA-TTTAC 1633 |||||||| ||| || |||| || ||||||||||||||||| || || || || ||| | Sbjct 43546 ATTGCAAATCACGATACATGGAATCCCACCTTTAATTTGAACTGGTTTGCCGTACTTTGC 43605 Query 1634 AGTTGGACTGCCAGTCCCTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCTTTAAAT 1693 | || |||||||| | | ||| || || || || | || | || ||| |||||| Sbjct 43606 A-TTTGACTGCCAATTGCATTGTGCTCCTATGAACTGTTGATAATGTTTTTTAATTAAAT 43664 Query 1694 AATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAAAACCCTAGAAT 1753 || |||| || ||||||||||||||||||| |||| || || | | |||| Sbjct 43665 AAGCTGGAGGGATGTCATCAATGACGTTATACCATGCGTCGTTCGATTATGTTTTCGAAT 43724 Query 1754 TGAAATCAAGGTGTCCACTCAAATAGTTATGTGGGCCTAAAGACCGAGCCCACATTGTTT 1813 | ||||| | || | | ||| |||||||| || || || || ||||| | ||||| Sbjct 43725 TCAAATCCATAAAGCCCATTATATAATTATGTGGACCCAACGAACGTGCCCAAACTGTTT 43784 Query 1814 TGCCCGTTCGAGAA 1827 | || ||| |||| Sbjct 43785 TACCGATTCTAGAA 43798 >seq33 Length=454124 Score = 122 bits (134), Expect = 1e-24 Identities = 246/359 (69%), Gaps = 16/359 (4%) Strand=Plus/Minus Query 1464 ATAGAGGGGGCAGTCGAGGAAGATGAATTGGGCATTTTTTAGTGTCCAC--TCTCTTAGT 1521 ||||||||| ||||| |||| ||||| ||||| | || |||||| | || | | Sbjct 403408 ATAGAGGGGT--GTCGATGAAGTGGAATTCTGCATTCTGTAAAGTCCACGATTTCCAATT 403351 Query 1522 GCTGCATTTTCAGCTTTGTCGAGAAACTCTTTATAGCTGGCCCCCTCT-----CCGGGAT 1576 || |||| | || | |||| ||| ||||||| | | |||| || |||| Sbjct 403350 --TGAATTTGAATCTATATCGAAGAACGCTTTATAA---GACAACTCTGGACCCCAGGAT 403296 Query 1577 TGCAAAGCACTATTGATGGGATTCCACCTTTAATTTGAACCGGCTTTCCATA-TTTACAG 1635 |||||||||| || |||| || || | |||||||||||| || ||||| || ||| || Sbjct 403295 TGCAAAGCACGATACATGGAATCCCGCTTTTAATTTGAACTGGTTTTCCGTACTTTGCA- 403237 Query 1636 TTGGACTGCCAGTCCCTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCTTTAAATAA 1695 || |||||||||| | || | || | || | || | || ||| |||||||| Sbjct 403236 TTTGACTGCCAGTTGCACTGTACGCCTACGAACTGTTGATAATGATTTTTAATTAAATAA 403177 Query 1696 TGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAAAACCCTAGAATTG 1755 |||| |||||||||||||||||||||| |||| || ||| | || ||||| Sbjct 403176 GCTGGAGGGACGTCATCAATGACGTTATACCACGCGTCGTTCGAGTATGTTCTCGAATTC 403117 Query 1756 AAATCAAGGTGTCCACTCAAATAGTTATGTGGGCCTAAAGACCGAGCCCACATTGTTTT 1814 ||||| | || | | || |||||||| || || || || ||||| | |||||| Sbjct 403116 AAATCCATAAAGCCCATTATGTAATTATGTGGACCCAACGAACGTGCCCAAACTGTTTT 403058 >seq3283 Length=49157 Score = 120 bits (132), Expect = 5e-24 Identities = 178/250 (71%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 1569 TCCGGGATTGCAAAGCACTATTGATGGGATTCCACCTTTAATTTGAACCGGCTTTCCATA 1628 ||| ||||||||||| || || ||| || || |||||||||||||| || || || || Sbjct 2281 TCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTGGTTTCCCGTA 2222 Query 1629 -TTTACAGTTGGACTGCCAGTCCCTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCT 1687 ||| || |||| |||||| | | || || || | || | || | ||||| Sbjct 2221 CTTTGCA-TTGGCCTGCCAATTTCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTAA 2163 Query 1688 TTAAATAATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAAAACCC 1747 ||||||||| ||||| |||||| || |||||||||||| | ||||||||| | Sbjct 2162 TTAAATAATTCGGAGGGACGTCGTCGATGACGTTATACCATGCATCATTTGAGTACGTTT 2103 Query 1748 TAGAATTGAAATCAAGGTGTCCACTCAAATAGTTATGTGGGCCTAAAGACCGAGCCCACA 1807 | ||||| ||||| | ||| | | ||||| ||||||||||| || |||||||| Sbjct 2102 TGGAATTAAAATCCATAAATCCCATTATGTAGTTGTGTGGGCCTAATGAACGAGCCCATG 2043 Query 1808 TTGTTTTGCC 1817 |||||| || Sbjct 2042 CTGTTTTCCC 2033 >seq3439 Length=62978 Score = 116 bits (128), Expect = 6e-23 Identities = 172/244 (70%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1574 GATTGCAAAGCACTATTGATGGGATTCCACCTTTAATTTGAACCGGCTTTCCATATTTAC 1633 |||||||||| || || ||| || || |||||||||||||| || ||||| || || Sbjct 956 GATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTGGTTTTCCGTACTTTG 897 Query 1634 AGTTGGACTGCCAGTCCCTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCTTTAAAT 1693 ||||| ||||| | | || || || | || | || | ||||| |||||| Sbjct 896 CGTTGGCATGCCAATTTCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTAATTAAAT 837 Query 1694 AATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAAAACCCTAGAAT 1753 ||| ||||| ||| ||||| |||||||||||| | ||||||||| | | |||| Sbjct 836 AATTCGGAGGGACATCATCGATGACGTTATACCATGCATCATTTGAGTACGTTTTGGAAT 777 Query 1754 TGAAATCAAGGTGTCCACTCAAATAGTTATGTGGGCCTAAAGACCGAGCCCACATTGTTT 1813 | ||||| | ||| | | ||||| ||||||||||| || |||||||| ||||| Sbjct 776 TAAAATCCATAAATCCCATTATGTAGTTGTGTGGGCCTAATGAACGAGCCCATGCTGTTT 717 Query 1814 TGCC 1817 | || Sbjct 716 TCCC 713 >seq22495 Length=567 Score = 111 bits (122), Expect = 3e-21 Identities = 166/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 1569 TCCGGGATTGCAAAGCACTATTGATGGGATTCCACCTTTAATTTGAACCGGCTTTCCATA 1628 ||| ||||||||||| || || | | || || | |||||||||||| || ||||| || Sbjct 368 TCCAGGATTGCAAAGTACGATACTTAGAATCCCGCATTTAATTTGAACTGGTTTTCCGTA 309 Query 1629 -TTTACAGTTGGACTGCCAGTCCCTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCT 1687 ||| || |||| |||||||| | || || || | || | || || ||||| Sbjct 308 CTTTGCA-TTGGCCTGCCAGTTGCGCTGTGCGCCTACGAACTGTTGACAATGCTTCTTAA 250 Query 1688 TTAAATAATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAAAACCC 1747 ||||||||| ||||| || |||||| |||||||||||| | ||||||||| | Sbjct 249 TTAAATAATTCGGAGGGATGTCATCGATGACGTTATACCATGCATCATTTGAGTACGTTT 190 Query 1748 TAGAATTGAAATCAAGGTGTCCACTCAAATAGTTATGTGGGCCTAAAGACCGA 1800 | ||||| ||||| | ||| | | ||||| ||||||||||| || ||| Sbjct 189 TGGAATTAAAATCCAAAAATCCTATTATGTAGTTGTGTGGGCCTAATGAACGA 137 >seq4295 Length=67413 Score = 111 bits (122), Expect = 3e-21 Identities = 238/350 (68%), Gaps = 7/350 (2%) Strand=Plus/Minus Query 1470 GGGGCAGTCGAGGAAGATGAATTGGGCATTTTTTAGTGTCCACTCTCTT-AGTGCTGCAT 1528 |||| |||| ||||| ||||| |||||| || |||||| | |||| | | | || Sbjct 46949 GGGGGTGTCGGCGAAGAAGAATTCTGCATTTCCTAATGTCCATT-TCTTCAAAGTTAAAT 46891 Query 1529 TTTCAGCTTTGTCGAGAAACTCTTTATAGCTGGCCCCCTC---TCCG-GGATTGCAAAGC 1584 || | ||| |||||||| ||||||| | | | || ||| |||||| | ||| Sbjct 46890 TTATATCTTGTTCGAGAAAAGCTTTATA-CGAACACTCTGGTGTCCTTGGATTGTAGAGC 46832 Query 1585 ACTATTGATGGGATTCCACCTTTAATTTGAACCGGCTTTCCATATTTACAGTTGGACTGC 1644 || ||| |||||||||| |||||||||||| | || || || || || || || | | Sbjct 46831 ACGATTCATGGGATTCCCCCTTTAATTTGATCTGGTTTACCGTACTTGGCATTTGAGTTC 46772 Query 1645 CAGTCCCTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCTTTAAATAATGCGGAGCG 1704 || | |||||| |||| | ||||| || | ||| || ||||| ||| Sbjct 46771 CAATTGTACTGGGCCACAATGAGCTCTTTTCAATATTTTTTCTGCAAATAGGATAGAGAT 46712 Query 1705 ACGTCATCAATGACGTTATACTTGACGTCATTTGAGAAAACCCTAGAATTGAAATCAAGG 1764 |||||||| || ||||| ||| | | ||| || || | ||||| ||||| | | Sbjct 46711 ACGTCATCTATAACGTTGTACCATGCATTATTCGAAAATGATTTCGAATTAAAATCCATG 46652 Query 1765 TGTCCACTCAAATAGTTATGTGGGCCTAAAGACCGAGCCCACATTGTTTT 1814 || | | ||||||||||||| ||||||||| ||||| ||||| || Sbjct 46651 AAGCCCATTATGTAGTTATGTGGGCATAAAGACCGTGCCCATATTGTCTT 46602 >seq1993 Length=81530 Score = 104 bits (114), Expect = 4e-19 Identities = 190/276 (69%), Gaps = 2/276 (1%) Strand=Plus/Minus Query 1567 TCTCCGGGATTGCAAAGCACTATTGATGGGATTCCACCTTTAATTTGAACCGGCTTTCCA 1626 || || |||||||||||||| || |||| || || ||||||||||||| || || || Sbjct 74406 TCCCCAGGATTGCAAAGCACGATACATGGAATCCCGTCTTTAATTTGAACTGGTTTGCCG 74347 Query 1627 TA-TTTACAGTTGGACTGCCAGTCCCTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAG 1685 || ||| || || |||||||| | | ||| || | | || | || | || ||| Sbjct 74346 TACTTTGCA-TTTGACTGCCAATTGCGTTGTGCTCATACGAACTGTTGATAATGATTTTT 74288 Query 1686 CTTTAAATAATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAAAAC 1745 |||||||| |||| |||||||||||||||||||||| ||| || || | Sbjct 74287 AATTAAATAAGCTGGAGGGACGTCATCAATGACGTTATACCACGCGTTGTTCGATTATGT 74228 Query 1746 CCTAGAATTGAAATCAAGGTGTCCACTCAAATAGTTATGTGGGCCTAAAGACCGAGCCCA 1805 | ||||| ||||| | || | | ||| |||||||| || || || || | ||| Sbjct 74227 TTTCGAATTCAAATCCATAAAGCCCATTATATAATTATGTGGACCCAACGAACGTGTCCA 74168 Query 1806 CATTGTTTTGCCCGTTCGAGAATCACCCTCAATTAT 1841 | |||||| || ||| |||| || ||||| || Sbjct 74167 AACTGTTTTACCGATTCTAGAAGGTCCTTCAATAAT 74132 >seq442 Length=237535 Score = 104 bits (114), Expect = 4e-19 Identities = 176/250 (70%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 1569 TCCGGGATTGCAAAGCACTATTGATGGGATTCCACCTTTAATTTGAACCGGCTTTCCATA 1628 ||| ||||||||||| | || ||| || | |||||||||||||| | ||||| || Sbjct 22780 TCCAGGATTGCAAAGTTCGATACTTGGAATCTCGCCTTTAATTTGAACTGATTTTCCGTA 22839 Query 1629 -TTTACAGTTGGACTGCCAGTCCCTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCT 1687 ||| || |||| |||| ||| | ||| || || | || | || | |||||| Sbjct 22840 CTTTGCA-TTGGCCTGCTAGTGTCGTTGTGCGCCTACGAACTGTTAATAATGCTTTTTAA 22898 Query 1688 TTAAATAATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAAAACCC 1747 ||||||||| || || |||||| || || ||||||||| || | ||||||||| | Sbjct 22899 TTAAATAATTCGAAGGGACGTC-TCGATAACGTTATACCTG-CATCATTTGAGTACGTTT 22956 Query 1748 TAGAATTGAAATCAAGGTGTCCACTCAAATAGTTATGTGGGCCTAAAGACCGAGCCCACA 1807 | |||| ||||||| || | | ||||| ||||||||||| || ||||| || Sbjct 22957 TCAAATTAAAATCAATAAATCTCATTATGTAGTTGTGTGGGCCTAATGAACGAGCTCATG 23016 Query 1808 TTGTTTTGCC 1817 |||||| || Sbjct 23017 CTGTTTTCCC 23026 >seq77518 Length=14724 Score = 102 bits (112), Expect = 1e-18 Identities = 246/370 (66%), Gaps = 13/370 (4%) Strand=Plus/Minus Query 1464 ATAGAGGGGGCAGTCGAGGAAGATGAATTGGGCATTTTTTAGTGTCCACTCTCTTAGTGC 1523 |||||| || ||||| |||| ||||| ||||||| || |||||| | || Sbjct 2509 ATAGAGAAGGGTGTCGATGAAGTGGAATTCTGCATTTTGTAAAGTCCACGATTTTCAATT 2450 Query 1524 TGCATTTTCAGCTTTGTCGAGAAACTCTTTATAG-------CTGGCCCCCTCTCCGGGAT 1576 || |||| | || || | || ||||||| |||| |||| | |||| Sbjct 2449 TGAATTTGAATCTAAATCCAAGAATGCTTTATAAGATAAATCTGGACCCC----CAGGAT 2394 Query 1577 TGCAAAGCACTATTGATGGGATTCCACCTTTAATTTGAACCGGCTTTCCATA-TTTACAG 1635 ||||||| || || |||| || || |||||||||||||| | ||| | || ||| || Sbjct 2393 TGCAAAGTACGATACATGGAATCCCGCCTTTAATTTGAACTGATTTTTCGTACTTTGCAT 2334 Query 1636 TTGGACTGCCAGTCCCTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCTTTAAATAA 1695 ||| |||| |||| | ||| || || | || | || | |||||| |||||||| Sbjct 2333 TTG-ACTGTCAGTTGCGTTGTGCTCCTACGAACTGTTGATAATGCTTTTTAATTAAATAA 2275 Query 1696 TGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAAAACCCTAGAATTG 1755 |||| ||| |||||||||||||||||| |||| || ||| | | |||| Sbjct 2274 GCTGGAGGGACATCATCAATGACGTTATACCACGCGTCGTTCGAGTATGTTTTCAAATTC 2215 Query 1756 AAATCAAGGTGTCCACTCAAATAGTTATGTGGGCCTAAAGACCGAGCCCACATTGTTTTG 1815 ||||| | || | | ||| |||||||| || || | || ||||| | |||||| Sbjct 2214 AAATCCATAAAGCCCATTATATAATTATGTGGACCCAACTAACGTGCCCAAACTGTTTTA 2155 Query 1816 CCCGTTCGAG 1825 || ||| || Sbjct 2154 CCGATTCTAG 2145 >seq54129 Length=2260 Score = 102 bits (112), Expect = 1e-18 Identities = 174/250 (70%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 1569 TCCGGGATTGCAAAGCACTATTGATGGGATTCCACCTTTAATTTGAACCGGCTTTCCATA 1628 ||| ||||||||||| || || ||| || || ||||||||||||| || ||||| || Sbjct 2258 TCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAATTGGTTTTCCGTA 2199 Query 1629 -TTTACAGTTGGACTGCCAGTCCCTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCT 1687 ||| || |||| ||| |||| || || || | || | || | ||||| Sbjct 2198 CTTTGCA-TTGGCCTGTCAGTTGTGCTGTGCGCCTACGAACTGTTGGTAATGCTTCTTAA 2140 Query 1688 TTAAATAATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAAAACCC 1747 ||||||||| ||||| ||| || || |||||||||||| || ||||||||| | Sbjct 2139 TTAAATAATTCGGAGGGACATCGTCGATGACGTTATACCATACATCATTTGAGTATGTTT 2080 Query 1748 TAGAATTGAAATCAAGGTGTCCACTCAAATAGTTATGTGGGCCTAAAGACCGAGCCCACA 1807 | ||||| |||| | ||| | | ||||| ||| ||| ||| || |||||||| Sbjct 2079 TGGAATTAAAATTCATAAATCCCATTATGTAGTTGTGTTGGCATAATGAACGAGCCCATG 2020 Query 1808 TTGTTTTGCC 1817 |||||| || Sbjct 2019 CTGTTTTTCC 2010 >seq20728 Length=3653 Score = 98.7 bits (108), Expect = 2e-17 Identities = 162/227 (71%), Gaps = 5/227 (2%) Strand=Plus/Plus Query 1593 TGGGATTCCACCTTTAATTTGAACCGGCTTTCCATA-TTTACAGTTGGACTGCCAGTCCC 1651 ||| || || ||||||||||||| || ||||| || ||| || |||| ||||| || | Sbjct 1441 TGGAATCCCCCCTTTAATTTGAAATGGTTTTCCGTACTTTGCA-TTGGCCTGCC-GTTGC 1498 Query 1652 TTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCTTTAAATAATGCGGAGCGACGTCAT 1711 || || || | || | || | |||||| ||||||||| ||||| |||||||| Sbjct 1499 GCTGTGCGCCTACGAACTGTTGATAATGCTTTTTAATTAAATAATTCGGAGGGACGTCAT 1558 Query 1712 CAATGACGTTATA-CTTGACGTCATTTGAGAAAACCCTAGAATTGAAATCAAGGTGTCCA 1770 | ||||||||||| | || | ||||||||| | | ||||| ||||| | || Sbjct 1559 CGATGACGTTATATCATG-CATCATTTGAGTACGTTTTCGAATTAAAATCTATAAATCTC 1617 Query 1771 CTCAAATAGTTATGTGGGCCTAAAGACCGAGCCCACATTGTTTTGCC 1817 | | ||||| |||||| |||| || |||||||| |||||| || Sbjct 1618 ATTATGTAGTTGTGTGGGACTAATGAACGAGCCCATGCTGTTTTCCC 1664 >seq1010 Length=204159 Score = 96.9 bits (106), Expect = 6e-17 Identities = 246/370 (66%), Gaps = 12/370 (3%) Strand=Plus/Minus Query 1464 ATAGAGGGGGCAGTCGAGGAAGATGAATTGGGCATTTTTTAGTGTCCACTCTCTT-AGTG 1522 ||||| ||| ||||||||||| ||||| |||||| ||| |||||| | |||| | | Sbjct 41027 ATAGAAAGGGGTGTCGAGGAAGAAGAATTCTGCATTTCTTAATGTCCATT-TCTTCAAAG 40969 Query 1523 CTGCATTTTCAGCTTTGTCGAGAAACTCTTTATAGC------TGGCCCCCTCTCCGGGAT 1576 | |||| || | | || ||||| |||||| ||| | || ||| Sbjct 40968 TTAAATTTACATCATGTTCTAGAAAAGATTTATACGAATATTTGGGTGTCCCTA---GAT 40912 Query 1577 TGCAAAGCACTATTGATGGGATTCCACCTTTAATTTGAACCGGCTTTCCATATTTACAGT 1636 |||| ||||| || || |||||| ||||||||| ||| || || || || ||| | Sbjct 40911 TGCAGAGCACGATACATAGGATTCTCCCTTTAATTAAAACTGGTTTACCGTACTTAGCAT 40852 Query 1637 TGGACTGCCAGTCCCTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCTTT-AAATAA 1695 | || ||||| | ||| ||| ||| | |||||||| || ||| || ||||| Sbjct 40851 TTGATTGCCAATTGTACTGGACCCTAATGAGCTCTTTCCAATGATTTTTTTTGCAAATAG 40792 Query 1696 TGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAAAACCCTAGAATTG 1755 ||| |||||||| || || |||||| | | ||| || || | ||||| Sbjct 40791 GATAGAGACACGTCATCTATAACATTATACCATGCATTATTCGAAAATGATTTTGAATTA 40732 Query 1756 AAATCAAGGTGTCCACTCAAATAGTTATGTGGGCCTAAAGACCGAGCCCACATTGTTTTG 1815 ||||| | | || | | |||||||||||||||||||| || |||| ||||| || Sbjct 40731 AAATCTATGAAGCCCATTATGTAGTTATGTGGGCCTAAAGATCGTTCCCATATTGTCTTT 40672 Query 1816 CCCGTTCGAG 1825 || ||| || Sbjct 40671 CCAATTCTAG 40662 Score = 80.6 bits (88), Expect = 4e-12 Identities = 174/257 (68%), Gaps = 4/257 (2%) Strand=Plus/Plus Query 1570 CCGGGATTGCAAAGCACTATTGATGGGATTCCACCTTTAATTTGAACCGGCTTTCCATA- 1628 || |||||||| ||||| || |||||||| | ||||||||||||| | || || || Sbjct 36484 CCTGGATTGCAGAGCACGATACATGGGATTTCCTCTTTAATTTGAACTAGTTTACCGTAC 36543 Query 1629 TTTACAGTTGGACTGCCAGTCCCTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCTT 1688 || ||| | || ||||| | | ||||| ||||| |||||||| | ||| | Sbjct 36544 TTGACA-TGTGATTGCCAATTGTGCTAGGCCCTAATCAGCTCTTTCCAAT--TTTTTTTG 36600 Query 1689 TAAATAATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAAAACCCT 1748 ||||| ||| || ||||| |||| |||||| | | | | || || | Sbjct 36601 CAAATAGGATCGAGACACATCATCTATGAAATTATACCATGCATTAATCGAAAATGATTT 36660 Query 1749 AGAATTGAAATCAAGGTGTCCACTCAAATAGTTATGTGGGCCTAAAGACCGAGCCCACAT 1808 ||||| ||||| | | || | | |||||| ||||||||||||| || ||||| || Sbjct 36661 CGAATTAAAATCCATGAAGCCCATTATGTAGTTACGTGGGCCTAAAGATCGTGCCCATAT 36720 Query 1809 TGTTTTGCCCGTTCGAG 1825 ||| || || ||| || Sbjct 36721 TGTCTTCCCAATTCTAG 36737 >seq815 Length=151552 Score = 96.9 bits (106), Expect = 6e-17 Identities = 173/250 (69%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 1569 TCCGGGATTGCAAAGCACTATTGATGGGATTCCACCTTTAATTTGAACCGGCTTTCCATA 1628 ||| ||||||||||| || || ||| || || |||||||||||| | || ||| | || Sbjct 85422 TCCAGGATTGCAAAGTACAATACTTGGAATCCCGCCTTTAATTTGACCGGGTTTTTCGTA 85363 Query 1629 -TTTACAGTTGGACTGCCAGTCCCTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCT 1687 ||| || |||| || ||||| | || || || | || | || | | ||| Sbjct 85362 CTTTGCA-TTGGCCTTCCAGTTGCGCTGTGCGCCTACGAACTATTGATAATACTTCTAAA 85304 Query 1688 TTAAATAATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAAAACCC 1747 ||||||||| | ||| |||||| || |||||||||||| | ||||||||| | Sbjct 85303 TTAAATAATTCAGAGAGACGTCGTCGATGACGTTATACCATGCATCATTTGAGTACGTTT 85244 Query 1748 TAGAATTGAAATCAAGGTGTCCACTCAAATAGTTATGTGGGCCTAAAGACCGAGCCCACA 1807 | ||||| ||||| | ||| | | ||||| |||| |||||| | |||||||| Sbjct 85243 TGGAATTAAAATCCATAAATCCCATTATGTAGTTGTGTGTGCCTAATAAACGAGCCCATG 85184 Query 1808 TTGTTTTGCC 1817 || |||| || Sbjct 85183 TTATTTTCCC 85174 >seq490 Length=137872 Score = 95.1 bits (104), Expect = 2e-16 Identities = 169/238 (71%), Gaps = 14/238 (6%) Strand=Plus/Minus Query 1575 ATTGCAAAGCACTATTGATGGGATTCCACCTTTAATTTGAACCGGCTTTCCATATTTACA 1634 |||||| || || |||||||| ||||||||||||||||| | ||||| ||||||| | Sbjct 70618 ATTGCATAGGACAATTGATGGTATTCCACCTTTAATTTGTATTGGCTTAGCATATTTTGA 70559 Query 1635 GTTGGACTGCCAGTCCCTTTG---GGCCCCAATCAATTCTTTCCAGTGCTTTAGCTT-TA 1690 | | |||||| || || ||||||||| | || |||| ||||| ||| | Sbjct 70558 ATCAGCTTGCCAG---CTATGCTTGGCCCCAATAAGCTCCCTCCAATGCTT---CTTCCA 70505 Query 1691 AATA-ATGC-GGAGCGACGTCATCAATGACGTTATA-CTTGACGTCATTTGAGAAAACCC 1747 | | |||| |||| ||||||||| ||||||||||| | |||| ||||| || || | Sbjct 70504 GAGAGATGCTGGAGGGACGTCATCTATGACGTTATACCATGAC-TCATTGGAAAATGTCT 70446 Query 1748 TAGAATTGAAATCAAGGTGTCCACTCAAATAGTTATGTGGGCCTAAAGACCGAGCCCA 1805 | ||||||||| | || | || || |||||||| || ||| | |||||| Sbjct 70445 TTCTATTGAAATCCATAACGCCCATAAAGTAATTATGTGGACCCAAACTTCTAGCCCA 70388 >seq953 Length=224861 Score = 93.3 bits (102), Expect = 7e-16 Identities = 172/250 (69%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 1569 TCCGGGATTGCAAAGCACTATTGATGGGATTCCACCTTTAATTTGAACCGGCTTTCCATA 1628 ||| |||||||||| || || ||| || || ||||||||||||| | ||||| || Sbjct 1842 TCCAGGATTGCAAAATACGATACTTGGAATCCCGCCTTTAATTTGAATTGATTTTCCGTA 1901 Query 1629 -TTTACAGTTGGACTGCCAGTCCCTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCT 1687 ||| || ||| |||||| | | || | || | || | || | | |||| Sbjct 1902 CTTTGCA-TTGACCTGCCAATGTCGCTGTACGCCTACGAACTGTTGATAATACTTTTTAA 1960 Query 1688 TTAAATAATGCGGAGCGACGTCATCAATGACGTTATACTTGACGTCATTTGAGAAAACCC 1747 ||||||||| ||||| |||||| || || ||||||||| | ||||||||| | Sbjct 1961 TTAAATAATTCGGAGGGACGTCGTCGATAACGTTATACCATGCATCATTTGAGTACGTTT 2020 Query 1748 TAGAATTGAAATCAAGGTGTCCACTCAAATAGTTATGTGGGCCTAAAGACCGAGCCCACA 1807 | ||||| ||||| | || | | ||||| ||||||||||| || |||||||| Sbjct 2021 TCGAATTAAAATCCATAAATCTCATTATGTAGTTGTGTGGGCCTAATGAACGAGCCCATG 2080 Query 1808 TTGTTTTGCC 1817 |||||| || Sbjct 2081 CTGTTTTCCC 2090 >seq3059 Length=182465 Score = 77.0 bits (84), Expect = 5e-11 Identities = 108/149 (72%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 1569 TCCGGGATTGCAAAGCACTATTGATGGGATTCCACCTTTAATTTGAACCGGCTTTCCAT- 1627 ||| ||||||||||| || || ||| || || ||||||||||||| || ||||| | Sbjct 20417 TCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAATTGGTTTTCCGTA 20358 Query 1628 ATTTACAGTTGGACTGCCAGTCCCTTTGGGCCCCAATCAATTCTTTCCAGTGCTTTAGCT 1687 |||| || |||| || ||||| | || || || | || | || | ||||| Sbjct 20357 ATTTGCA-TTGGCCTACCAGTTGCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTAA 20299 Query 1688 TTAAATAATGCGGAGCGACGTCATCAATG 1716 ||||||||| ||||| |||||| |||||| Sbjct 20298 TTAAATAATTCGGAGGGACGTCGTCAATG 20270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8401601655720