Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20]
89,515 sequences; 867,455,155 total letters
Query= NC_007211.1
Length=2745
Score E
Sequences producing significant alignments: (Bits) Value
seq3283 118 2e-23
seq3439 105 1e-19
seq5745 93.3 7e-16
seq33 89.7 9e-15
seq30129 87.8 3e-14
seq953 86.0 1e-13
seq35612 84.2 4e-13
seq6801 82.4 1e-12
seq54129 80.6 5e-12
seq22495 80.6 5e-12
seq4104 80.6 5e-12
seq3059 80.6 5e-12
seq1993 80.6 5e-12
seq77518 77.0 6e-11
seq442 77.0 6e-11
>seq3283
Length=49157
Score = 118 bits (130), Expect = 2e-23
Identities = 225/324 (69%), Gaps = 12/324 (4%)
Strand=Plus/Minus
Query 1665 CTCCTCATCAAGGAACTCTTTATAGGAG-GATGTTGGACCAGGATTGCAGAGGAAGATTG 1723
|||| ||| | |||| ||||||||| ||| || ||||||||||| || | |||
Sbjct 2317 CTCCAAATCCAAGAACGTTTTATAGGATTGATCA-GGTCCAGGATTGCAAAGTACGATAC 2259
Query 1724 TTGGGATCCCGCCTTTAATTTGAACGGGCTTCCCGTATTTTGTATTGGACTGCCAATCCC 1783
|||| |||||||||||||||||||| || |||||||| |||| ||||| |||||||| |
Sbjct 2258 TTGGAATCCCGCCTTTAATTTGAACTGGTTTCCCGTACTTTGCATTGGCCTGCCAATTTC 2199
Query 1784 TTTGGGCCCCCATGAATTCCTTGA-AATGTT------TTACATAGTGAGGATCAACATCG 1836
|| || || | ||| | |||| |||| | ||| ||| | ||| || |||
Sbjct 2198 GCTGTGCGCCTACGAACT-GTTGATAATGCTTCTTAATTAAATAATTCGGAGGGACGTCG 2140
Query 1837 TCTATTATGTTATACCAGGCTTCGTTGCTGTAAACCCTAGGACTAAGGTCAATATGACCG 1896
|| || | ||||||||| || || || ||| | | | ||| || ||| ||
Sbjct 2139 TCGATGACGTTATACCATGCATCATTTGAGTACGTTTTGGAATTAAAATCCATAAATCCC 2080
Query 1897 CATAAGTAATTATGTGGACCTAATGATCTAGCCCACATGGTTTTCCC-AGTCCTGCTGTC 1955
|| ||| || ||||| |||||||| | |||||| |||||||| | || || ||
Sbjct 2079 ATTATGTAGTTGTGTGGGCCTAATGAACGAGCCCATGCTGTTTTCCCTATTCTTGATG-G 2021
Query 1956 ACCTTCTATAACTATACTTATTGG 1979
||||| |||| || || || ||
Sbjct 2020 GCCTTCAATAATAATGCTCATGGG 1997
>seq3439
Length=62978
Score = 105 bits (116), Expect = 1e-19
Identities = 220/323 (68%), Gaps = 10/323 (3%)
Strand=Plus/Minus
Query 1665 CTCCTCATCAAGGAACTCTTTATAGGAGGATGTTGGACCAGGATTGCAGAGGAAGATTGT 1724
|||| ||| | |||| ||||||||| || || ||| ||||||| || | ||| |
Sbjct 997 CTCCAAATCTAAGAACGTTTTATAGGATAATTCAGGTCCAAGATTGCAAAGTACGATACT 938
Query 1725 TGGGATCCCGCCTTTAATTTGAACGGGCTTCCCGTATTTTGTATTGGACTGCCAATCCCT 1784
||| |||||||||||||||||||| || || ||||| |||| |||| ||||||| |
Sbjct 937 TGGAATCCCGCCTTTAATTTGAACTGGTTTTCCGTACTTTGCGTTGGCATGCCAATTTCG 878
Query 1785 TTGGGCCCCCATGAATTCCTTGA-AATGTT------TTACATAGTGAGGATCAACATCGT 1837
|| || || | ||| | |||| |||| | ||| ||| | ||| ||||| |
Sbjct 877 CTGTGCGCCTACGAACT-GTTGATAATGCTTCTTAATTAAATAATTCGGAGGGACATCAT 819
Query 1838 CTATTATGTTATACCAGGCTTCGTTGCTGTAAACCCTAGGACTAAGGTCAATATGACCGC 1897
| || | ||||||||| || || || ||| | | | ||| || ||| ||
Sbjct 818 CGATGACGTTATACCATGCATCATTTGAGTACGTTTTGGAATTAAAATCCATAAATCCCA 759
Query 1898 ATAAGTAATTATGTGGACCTAATGATCTAGCCCACATGGTTTTCCC-AGTCCTGCTGTCA 1956
|| ||| || ||||| |||||||| | |||||| |||||||| | || || ||
Sbjct 758 TTATGTAGTTGTGTGGGCCTAATGAACGAGCCCATGCTGTTTTCCCTATTCTTGATG-GG 700
Query 1957 CCTTCTATAACTATACTTATTGG 1979
||||| |||| || || || ||
Sbjct 699 CCTTCAATAATAATGCTCATGGG 677
>seq5745
Length=45059
Score = 93.3 bits (102), Expect = 7e-16
Identities = 112/149 (75%), Gaps = 5/149 (3%)
Strand=Plus/Plus
Query 1671 ATCAAGGAACTCTTTATAGGAGGATGTTGGACC---AGGATTGCAGAGGAAGATTGTTGG 1727
||| | |||| ||||||| || | |||||| ||||||||| | | ||| |||
Sbjct 43507 ATCTAAGAACGCTTTATAAGATAAATCTGGACCCCCAGGATTGCAAATCACGATACATGG 43566
Query 1728 GATCCCGCCTTTAATTTGAACGGGCTTCCCGTATTTTGTATTGGACTGCCAATCCCTTTG 1787
||||| |||||||||||||| || || ||||| |||| ||| |||||||||| | |||
Sbjct 43567 AATCCCACCTTTAATTTGAACTGGTTTGCCGTACTTTGCATTTGACTGCCAATTGCATTG 43626
Query 1788 GGCCCCCATGAATTCCTTGA-AATGTTTT 1815
|| || ||||| | |||| ||||||||
Sbjct 43627 TGCTCCTATGAACT-GTTGATAATGTTTT 43654
>seq33
Length=454124
Score = 89.7 bits (98), Expect = 9e-15
Identities = 189/279 (68%), Gaps = 10/279 (4%)
Strand=Plus/Minus
Query 1671 ATCAAGGAACTCTTTATAGGAGGATGTTGGACC--AGGATTGCAGAGGAAGATTGTTGGG 1728
||| | |||| ||||||| || | |||||| ||||||||| || | ||| |||
Sbjct 403335 ATCGAAGAACGCTTTATAAGACAACTCTGGACCCCAGGATTGCAAAGCACGATACATGGA 403276
Query 1729 ATCCCGCCTTTAATTTGAACGGGCTTCCCGTATTTTGTATTGGACTGCCAATCCCTTTGG 1788
||||||| |||||||||||| || || ||||| |||| ||| |||||||| | | ||
Sbjct 403275 ATCCCGCTTTTAATTTGAACTGGTTTTCCGTACTTTGCATTTGACTGCCAGTTGCACTGT 403216
Query 1789 GCCCCCATGAATTCCTTGA-AATGTT------TTACATAGTGAGGATCAACATCGTCTAT 1841
| || | ||| | |||| |||| | ||| ||| ||| || || || ||
Sbjct 403215 ACGCCTACGAACT-GTTGATAATGATTTTTAATTAAATAAGCTGGAGGGACGTCATCAAT 403157
Query 1842 TATGTTATACCAGGCTTCGTTGCTGTAAACCCTAGGACTAAGGTCAATATGACCGCATAA 1901
| ||||||||| || ||||| ||| || | | | | || ||| || ||
Sbjct 403156 GACGTTATACCACGCGTCGTTCGAGTATGTTCTCGAATTCAAATCCATAAAGCCCATTAT 403097
Query 1902 GTAATTATGTGGACCTAATGATCTAGCCCACATGGTTTT 1940
||||||||||||||| || || | ||||| | |||||
Sbjct 403096 GTAATTATGTGGACCCAACGAACGTGCCCAAACTGTTTT 403058
>seq30129
Length=3650
Score = 87.8 bits (96), Expect = 3e-14
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 1665 CTCCTCATCAAGGAACTCTTTATAGGAGGATGTTGGACCAGGATTGCAGAGGAAGATTGT 1724
|||| ||| | |||| ||| ||||| | || ||||||||||| || | ||| |
Sbjct 2337 CTCCAAATCCAAGAACGTTTTTTAGGATAAATCAGGTCCAGGATTGCAAAGTACGATACT 2396
Query 1725 TGGGATCCCGCCTTTAATTTGAACGGGCTTCCCGTATTTTGTATTGGACTGCCAAT 1780
||| |||||||||||||||||||| | || ||||| |||| ||||| ||||||||
Sbjct 2397 TGGAATCCCGCCTTTAATTTGAACTCGTTTTCCGTACTTTGCATTGGCCTGCCAAT 2452
>seq953
Length=224861
Score = 86.0 bits (94), Expect = 1e-13
Identities = 207/306 (68%), Gaps = 12/306 (4%)
Strand=Plus/Plus
Query 1683 TTTATAGGAGGATGTTGGACCAGGATTGCAGAGGAAGATTGTTGGGATCCCGCCTTTAAT 1742
||||||||| | || ||||||||||| | | ||| |||| ||||||||||||||
Sbjct 1824 TTTATAGGATAAATCAGGTCCAGGATTGCAAAATACGATACTTGGAATCCCGCCTTTAAT 1883
Query 1743 TTGAACGGGCTTCCCGTATTTTGTATTGGACTGCCAATCCCTTTGGGCCCCCATGAATTC 1802
||||| | || ||||| |||| |||| |||||||| | || | || | ||| |
Sbjct 1884 TTGAATTGATTTTCCGTACTTTGCATTGACCTGCCAATGTCGCTGTACGCCTACGAACT- 1942
Query 1803 CTTGA-AATGTT------TTACATAGTGAGGATCAACATCGTCTATTATGTTATACCAGG 1855
|||| ||| | ||| ||| | ||| || ||||| || | ||||||||| |
Sbjct 1943 GTTGATAATACTTTTTAATTAAATAATTCGGAGGGACGTCGTCGATAACGTTATACCATG 2002
Query 1856 CTTCGTTGCTGTAAACCCTAGGACTAAGGTCAATATGACCGCA-TAAGTAATTATGTGGA 1914
| || || ||| | | | ||| || ||| | | || || ||| || |||||
Sbjct 2003 CATCATTTGAGTACGTTTTCGAATTAAAATCCATA-AATCTCATTATGTAGTTGTGTGGG 2061
Query 1915 CCTAATGATCTAGCCCACATGGTTTTCCC-AGTCCTGCTGTCACCTTCTATAACTATACT 1973
|||||||| | |||||| |||||||| | || || ||| ||||| |||| || ||
Sbjct 2062 CCTAATGAACGAGCCCATGCTGTTTTCCCTATTCTTGATGT-GCCTTCAATAATAATGCT 2120
Query 1974 TATTGG 1979
|| ||
Sbjct 2121 CATGGG 2126
>seq35612
Length=1588
Score = 84.2 bits (92), Expect = 4e-13
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 1665 CTCCTCATCAAGGAACTCTTTATAGGAGGATGTTGGACCAGGATTGCAGAGGAAGATTGT 1724
|||| ||| | ||| ||||||||| | || ||||||||||| || | ||| |
Sbjct 1473 CTCCAAATCCAAGAATGTTTTATAGGATAAATCAGGTCCAGGATTGCAAAGTACGATACT 1532
Query 1725 TGGGATCCCGCCTTTAATTTGAACGGGCTTCCCGTATTTTGTATTGGACTGCCAAT 1780
||| || ||||||||||||||||| || || ||||| |||| |||| ||||||||
Sbjct 1533 TGGAATGCCGCCTTTAATTTGAACTGGTTTTCCGTACTTTGCGTTGGCCTGCCAAT 1588
>seq6801
Length=49729
Score = 82.4 bits (90), Expect = 1e-12
Identities = 84/109 (77%), Gaps = 3/109 (3%)
Strand=Plus/Plus
Query 1671 ATCAAGGAACTCTTTATAGGAGGATGTTGGACC---AGGATTGCAGAGGAAGATTGTTGG 1727
||| | |||| |||||||||| | |||||| |||| |||| || | ||| |||
Sbjct 47060 ATCCAAGAACGCTTTATAGGACAAATCTGGACCCCTAGGAGTGCAAAGTACGATACATGG 47119
Query 1728 GATCCCGCCTTTAATTTGAACGGGCTTCCCGTATTTTGTATTGGACTGC 1776
|||||||||||||||||||| || || ||||| |||| ||| ||||||
Sbjct 47120 AATCCCGCCTTTAATTTGAACTGGTTTGCCGTACTTTGCATTTGACTGC 47168
>seq54129
Length=2260
Score = 80.6 bits (88), Expect = 5e-12
Identities = 114/161 (71%), Gaps = 6/161 (4%)
Strand=Plus/Minus
Query 1699 GGACCAGGATTGCAGAGGAAGATTGTTGGGATCCCGCCTTTAATTTGAACGGGCTTCCCG 1758
|| ||||||||||| || | ||| |||| ||||||||||||||||||| || || |||
Sbjct 2260 GGTCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAATTGGTTTTCCG 2201
Query 1759 TATTTTGTATTGGACTGCCAATCCCTTTGGGCCCCCATGAATTCCTTGAAATGTT----- 1813
|| |||| ||||| ||| || | || || || | ||| | | | |||| |
Sbjct 2200 TACTTTGCATTGGCCTGTCAGTTGTGCTGTGCGCCTACGAACTGTTGGTAATGCTTCTTA 2141
Query 1814 -TTACATAGTGAGGATCAACATCGTCTATTATGTTATACCA 1853
||| ||| | ||| |||||||| || | |||||||||
Sbjct 2140 ATTAAATAATTCGGAGGGACATCGTCGATGACGTTATACCA 2100
>seq22495
Length=567
Score = 80.6 bits (88), Expect = 5e-12
Identities = 86/114 (75%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 1665 CTCCTCATCAAGGAACTCTTTATAGGAGGATGTTGGACCAGGATTGCAGAGGAAGATTGT 1724
|||| ||| | ||| ||||||||| | || ||||||||||| || | ||| |
Sbjct 404 CTCCAAATCTAAGAATGTTTTATAGGATAAATCAGGTCCAGGATTGCAAAGTACGATACT 345
Query 1725 TGGGATCCCGCCTTTAATTTGAACGGGCTTCCCGTATTTTGTATTGGACTGCCA 1778
| | ||||||| |||||||||||| || || ||||| |||| ||||| ||||||
Sbjct 344 TAGAATCCCGCATTTAATTTGAACTGGTTTTCCGTACTTTGCATTGGCCTGCCA 291
>seq4104
Length=64936
Score = 80.6 bits (88), Expect = 5e-12
Identities = 80/104 (77%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 1665 CTCCTCATCAAGGAACTCTTTATAGGAGGATGTTGGACCAGGATTGCAGAGGAAGATTGT 1724
|||| ||| | |||| ||||||||| | || ||||||||||| || | ||| |
Sbjct 20864 CTCCAAATCCAAGAACGTTTTATAGGATAAATCGGGTCCAGGATTGCAAAGTACGATACT 20805
Query 1725 TGGGATCCCGCCTTTAATTTGAACGGGCTTCCCGTATTTTGTAT 1768
||| |||||||||||||||||||| || || ||||| |||| ||
Sbjct 20804 TGGAATCCCGCCTTTAATTTGAACTGGTTTTCCGTACTTTGCAT 20761
>seq3059
Length=182465
Score = 80.6 bits (88), Expect = 5e-12
Identities = 86/114 (75%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 1665 CTCCTCATCAAGGAACTCTTTATAGGAGGATGTTGGACCAGGATTGCAGAGGAAGATTGT 1724
|||| ||| | |||| ||||| ||| | || ||||||||||| || | ||| |
Sbjct 20453 CTCCAAATCCAAGAACGTTTTATCGGATAAATCAGGTCCAGGATTGCAAAGTACGATACT 20394
Query 1725 TGGGATCCCGCCTTTAATTTGAACGGGCTTCCCGTATTTTGTATTGGACTGCCA 1778
||| ||||||||||||||||||| || || ||||| |||| ||||| || |||
Sbjct 20393 TGGAATCCCGCCTTTAATTTGAATTGGTTTTCCGTAATTTGCATTGGCCTACCA 20340
>seq1993
Length=81530
Score = 80.6 bits (88), Expect = 5e-12
Identities = 65/79 (82%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 1702 CCAGGATTGCAGAGGAAGATTGTTGGGATCCCGCCTTTAATTTGAACGGGCTTCCCGTAT 1761
||||||||||| || | ||| ||| |||||| ||||||||||||| || || |||||
Sbjct 74403 CCAGGATTGCAAAGCACGATACATGGAATCCCGTCTTTAATTTGAACTGGTTTGCCGTAC 74344
Query 1762 TTTGTATTGGACTGCCAAT 1780
|||| ||| ||||||||||
Sbjct 74343 TTTGCATTTGACTGCCAAT 74325
>seq77518
Length=14724
Score = 77.0 bits (84), Expect = 6e-11
Identities = 140/202 (69%), Gaps = 11/202 (5%)
Strand=Plus/Minus
Query 1671 ATCAAGGAACTCTTTATAGGAGGATGTTGGACC---AGGATTGCAGAGGAAGATTGTTGG 1727
||| | ||| ||||||| || | |||||| ||||||||| || | ||| |||
Sbjct 2434 ATCCAAGAATGCTTTATAAGATAAATCTGGACCCCCAGGATTGCAAAGTACGATACATGG 2375
Query 1728 GATCCCGCCTTTAATTTGAACGGGCTTCCCGTATTTTGTATTGGACTGCCAATCCCTTTG 1787
|||||||||||||||||||| | || |||| |||| ||| ||||| || | | |||
Sbjct 2374 AATCCCGCCTTTAATTTGAACTGATTTTTCGTACTTTGCATTTGACTGTCAGTTGCGTTG 2315
Query 1788 GGCCCCCATGAATTCCTTGA-AATGTT------TTACATAGTGAGGATCAACATCGTCTA 1840
|| || | ||| | |||| |||| | ||| ||| ||| ||||| || |
Sbjct 2314 TGCTCCTACGAACT-GTTGATAATGCTTTTTAATTAAATAAGCTGGAGGGACATCATCAA 2256
Query 1841 TTATGTTATACCAGGCTTCGTT 1862
| | ||||||||| || |||||
Sbjct 2255 TGACGTTATACCACGCGTCGTT 2234
>seq442
Length=237535
Score = 77.0 bits (84), Expect = 6e-11
Identities = 87/117 (74%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1683 TTTATAGGAGGATGTTGGACCAGGATTGCAGAGGAAGATTGTTGGGATCCCGCCTTTAAT 1742
||||||||| | | || ||||||||||| || ||| |||| ||| ||||||||||
Sbjct 22762 TTTATAGGATAAATTAGGTCCAGGATTGCAAAGTTCGATACTTGGAATCTCGCCTTTAAT 22821
Query 1743 TTGAACGGGCTTCCCGTATTTTGTATTGGACTGCCAATCCCTTTGGGCCCCCATGAA 1799
|||||| | || ||||| |||| ||||| |||| | | | ||| || || | |||
Sbjct 22822 TTGAACTGATTTTCCGTACTTTGCATTGGCCTGCTAGTGTCGTTGTGCGCCTACGAA 22878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8666949044390
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