Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_010713.1 Length=2767 Score E Sequences producing significant alignments: (Bits) Value seq3439 113 8e-22 seq3283 107 3e-20 seq5745 102 1e-18 seq77518 100 5e-18 seq22495 100 5e-18 seq54129 91.5 3e-15 seq33 91.5 3e-15 seq1993 84.2 4e-13 seq953 84.2 4e-13 seq20728 80.6 5e-12 seq4104 80.6 5e-12 seq442 80.6 5e-12 seq30129 78.8 2e-11 seq815 78.8 2e-11 seq3059 77.0 6e-11 >seq3439 Length=62978 Score = 113 bits (124), Expect = 8e-22 Identities = 174/249 (70%), Gaps = 6/249 (2%) Strand=Plus/Minus Query 1682 GATTGCAGAGAAAGATAGTGGGAATCCCACCTTTAATTTGAACTGGCTTTCCGTATTTTG 1741 ||||||| || | |||| | |||||||| ||||||||||||||||| |||||||| |||| Sbjct 956 GATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTGGTTTTCCGTACTTTG 897 Query 1742 TATTGCTTTGCCAGTCTCTTTGGGCCCCCATGAATTCCTTAAAGTGCT------TTAAAT 1795 ||| ||||| | || || || || | ||| | | | | |||| |||||| Sbjct 896 CGTTGGCATGCCAATTTCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTAATTAAAT 837 Query 1796 AGTGGGGGTCGACATCATCAATGACGTTATACCATGCGTCATTACTGTAAACCTTGGGAC 1855 | | || ||||||||| ||||||||||||||||| ||||| ||| |||| | Sbjct 836 AATTCGGAGGGACATCATCGATGACGTTATACCATGCATCATTTGAGTACGTTTTGGAAT 777 Query 1856 TCAAGTCTAGGTGACCACATAAATAATTATGTGGTCCAAGTGATCTGGCCCACATTGTTT 1915 | || || | || || || || ||||| || | ||| | ||||| ||||| Sbjct 776 TAAAATCCATAAATCCCATTATGTAGTTGTGTGGGCCTAATGAACGAGCCCATGCTGTTT 717 Query 1916 TCCCTGTTC 1924 ||||| ||| Sbjct 716 TCCCTATTC 708 >seq3283 Length=49157 Score = 107 bits (118), Expect = 3e-20 Identities = 177/256 (69%), Gaps = 6/256 (2%) Strand=Plus/Minus Query 1675 GGCCCTGGATTGCAGAGAAAGATAGTGGGAATCCCACCTTTAATTTGAACTGGCTTTCCG 1734 || || |||||||| || | |||| | |||||||| ||||||||||||||||| || ||| Sbjct 2283 GGTCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTGGTTTCCCG 2224 Query 1735 TATTTTGTATTGCTTTGCCAGTCTCTTTGGGCCCCCATGAATTCCTTAAAGTGCT----- 1789 || |||| |||| ||||| | || || || || | ||| | | | | |||| Sbjct 2223 TACTTTGCATTGGCCTGCCAATTTCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTA 2164 Query 1790 -TTAAATAGTGGGGGTCGACATCATCAATGACGTTATACCATGCGTCATTACTGTAAACC 1848 ||||||| | || ||| || || ||||||||||||||||| ||||| ||| Sbjct 2163 ATTAAATAATTCGGAGGGACGTCGTCGATGACGTTATACCATGCATCATTTGAGTACGTT 2104 Query 1849 TTGGGACTCAAGTCTAGGTGACCACATAAATAATTATGTGGTCCAAGTGATCTGGCCCAC 1908 |||| | | || || | || || || || ||||| || | ||| | ||||| Sbjct 2103 TTGGAATTAAAATCCATAAATCCCATTATGTAGTTGTGTGGGCCTAATGAACGAGCCCAT 2044 Query 1909 ATTGTTTTCCCTGTTC 1924 |||||||||| ||| Sbjct 2043 GCTGTTTTCCCTATTC 2028 >seq5745 Length=45059 Score = 102 bits (112), Expect = 1e-18 Identities = 174/251 (69%), Gaps = 10/251 (4%) Strand=Plus/Plus Query 1677 CCCTGGATTGCAGAGAAAGATAGTGGGAATCCCACCTTTAATTTGAACTGGCTTTCCGTA 1736 ||| |||||||| | | |||| |||||||||||||||||||||||||| || ||||| Sbjct 43540 CCCAGGATTGCAAATCACGATACATGGAATCCCACCTTTAATTTGAACTGGTTTGCCGTA 43599 Query 1737 TTTTGTATTGCTTTGCCAGTCTCTTTGGGCCCCCATGAATTCCT--TAAAGTGCTTTAAA 1794 |||| ||| ||||| | | ||| || || ||||| | | ||| || ||||| Sbjct 43600 CTTTGCATTTGACTGCCAATTGCATTGTGCTCCTATGAACTGTTGATAATGTTTTTTAAT 43659 Query 1795 TA------GTGGGGGTCGACATCATCAATGACGTTATACCATGCGTCATTACTGTAAACC 1848 || ||| || || |||||||||||||||||||||||||| || || Sbjct 43660 TAAATAAGCTGGAGG--GATGTCATCAATGACGTTATACCATGCGTCGTTCGATTATGTT 43717 Query 1849 TTGGGACTCAAGTCTAGGTGACCACATAAATAATTATGTGGTCCAAGTGATCTGGCCCAC 1908 || | | |||| || | || || |||||||||||| || | || | ||||| Sbjct 43718 TTCGAATTCAAATCCATAAAGCCCATTATATAATTATGTGGACCCAACGAACGTGCCCAA 43777 Query 1909 ATTGTTTTCCC 1919 | |||||| || Sbjct 43778 ACTGTTTTACC 43788 >seq77518 Length=14724 Score = 100 bits (110), Expect = 5e-18 Identities = 125/170 (74%), Gaps = 10/170 (6%) Strand=Plus/Minus Query 1677 CCCTGGATTGCAGAGAAAGATAGTGGGAATCCCACCTTTAATTTGAACTGGCTTTCCGTA 1736 ||| |||||||| || | |||| |||||||| |||||||||||||||| ||| |||| Sbjct 2401 CCCAGGATTGCAAAGTACGATACATGGAATCCCGCCTTTAATTTGAACTGATTTTTCGTA 2342 Query 1737 TTTTGTATTGCTTTGCCAGTCTCTTTGGGCCCCCATGAATTCCTTAAAGTGCT------T 1790 |||| ||| || |||| | ||| || || | ||| | | | | |||| | Sbjct 2341 CTTTGCATTTGACTGTCAGTTGCGTTGTGCTCCTACGAACTGTTGATAATGCTTTTTAAT 2282 Query 1791 TAAATA--GTGGGGGTCGACATCATCAATGACGTTATACCATGCGTCATT 1838 |||||| ||| || |||||||||||||||||||||||| ||||| || Sbjct 2281 TAAATAAGCTGGAGG--GACATCATCAATGACGTTATACCACGCGTCGTT 2234 >seq22495 Length=567 Score = 100 bits (110), Expect = 5e-18 Identities = 124/170 (73%), Gaps = 6/170 (4%) Strand=Plus/Minus Query 1675 GGCCCTGGATTGCAGAGAAAGATAGTGGGAATCCCACCTTTAATTTGAACTGGCTTTCCG 1734 || || |||||||| || | |||| | ||||||| | ||||||||||||||| |||||| Sbjct 370 GGTCCAGGATTGCAAAGTACGATACTTAGAATCCCGCATTTAATTTGAACTGGTTTTCCG 311 Query 1735 TATTTTGTATTGCTTTGCCAGTCTCTTTGGGCCCCCATGAATTCCTTAAAGTGCT----- 1789 || |||| |||| ||||||| | || || || | ||| | | | | |||| Sbjct 310 TACTTTGCATTGGCCTGCCAGTTGCGCTGTGCGCCTACGAACTGTTGACAATGCTTCTTA 251 Query 1790 -TTAAATAGTGGGGGTCGACATCATCAATGACGTTATACCATGCGTCATT 1838 ||||||| | || || ||||| ||||||||||||||||| ||||| Sbjct 250 ATTAAATAATTCGGAGGGATGTCATCGATGACGTTATACCATGCATCATT 201 >seq54129 Length=2260 Score = 91.5 bits (100), Expect = 3e-15 Identities = 122/170 (72%), Gaps = 6/170 (4%) Strand=Plus/Minus Query 1675 GGCCCTGGATTGCAGAGAAAGATAGTGGGAATCCCACCTTTAATTTGAACTGGCTTTCCG 1734 || || |||||||| || | |||| | |||||||| ||||||||||||| ||| |||||| Sbjct 2260 GGTCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAATTGGTTTTCCG 2201 Query 1735 TATTTTGTATTGCTTTGCCAGTCTCTTTGGGCCCCCATGAATTCCTTAAAGTGCT----- 1789 || |||| |||| || |||| || || || | ||| | | | |||| Sbjct 2200 TACTTTGCATTGGCCTGTCAGTTGTGCTGTGCGCCTACGAACTGTTGGTAATGCTTCTTA 2141 Query 1790 -TTAAATAGTGGGGGTCGACATCATCAATGACGTTATACCATGCGTCATT 1838 ||||||| | || |||||| || ||||||||||||||| | ||||| Sbjct 2140 ATTAAATAATTCGGAGGGACATCGTCGATGACGTTATACCATACATCATT 2091 >seq33 Length=454124 Score = 91.5 bits (100), Expect = 3e-15 Identities = 123/170 (72%), Gaps = 10/170 (6%) Strand=Plus/Minus Query 1677 CCCTGGATTGCAGAGAAAGATAGTGGGAATCCCACCTTTAATTTGAACTGGCTTTCCGTA 1736 ||| |||||||| || | |||| |||||||| | ||||||||||||||| |||||||| Sbjct 403303 CCCAGGATTGCAAAGCACGATACATGGAATCCCGCTTTTAATTTGAACTGGTTTTCCGTA 403244 Query 1737 TTTTGTATTGCTTTGCCAGTCTCTTTGGGCCCCCATGAATTCCTTAAAGTGCT------T 1790 |||| ||| ||||||| | || | || | ||| | | | | || | | Sbjct 403243 CTTTGCATTTGACTGCCAGTTGCACTGTACGCCTACGAACTGTTGATAATGATTTTTAAT 403184 Query 1791 TAAATA--GTGGGGGTCGACATCATCAATGACGTTATACCATGCGTCATT 1838 |||||| ||| || ||| |||||||||||||||||||| ||||| || Sbjct 403183 TAAATAAGCTGGAGG--GACGTCATCAATGACGTTATACCACGCGTCGTT 403136 >seq1993 Length=81530 Score = 84.2 bits (92), Expect = 4e-13 Identities = 119/166 (72%), Gaps = 10/166 (6%) Strand=Plus/Minus Query 1677 CCCTGGATTGCAGAGAAAGATAGTGGGAATCCCACCTTTAATTTGAACTGGCTTTCCGTA 1736 ||| |||||||| || | |||| |||||||| |||||||||||||||| || ||||| Sbjct 74404 CCCAGGATTGCAAAGCACGATACATGGAATCCCGTCTTTAATTTGAACTGGTTTGCCGTA 74345 Query 1737 TTTTGTATTGCTTTGCCAGTCTCTTTGGGCCCCCATGAATTCCTTAAAGTGCT------T 1790 |||| ||| ||||| | | ||| || | | ||| | | | | || | | Sbjct 74344 CTTTGCATTTGACTGCCAATTGCGTTGTGCTCATACGAACTGTTGATAATGATTTTTAAT 74285 Query 1791 TAAATA--GTGGGGGTCGACATCATCAATGACGTTATACCATGCGT 1834 |||||| ||| || ||| |||||||||||||||||||| |||| Sbjct 74284 TAAATAAGCTGGAGG--GACGTCATCAATGACGTTATACCACGCGT 74241 >seq953 Length=224861 Score = 84.2 bits (92), Expect = 4e-13 Identities = 170/250 (68%), Gaps = 8/250 (3%) Strand=Plus/Plus Query 1596 GAACTCTGCATTTTTCAAAGCCCAAGTCTTT-AGTGCGGATTGCTTTTCTTCATTTAAAA 1654 ||| |||||||||| |||| |||||| || | | | |||| | || || ||| | Sbjct 1761 GAATTCTGCATTTTGTAAAGTCCAAGTTTTCCAATATGAATTGGAAT-CTAAATCTAAGA 1819 Query 1655 ATTGAATATAGCTGGCACCGGGCCCTGGATTGCAGAGAAAGATAGTGGGAATCCCACCTT 1714 || ||||| | | || || |||||||| | | |||| | |||||||| |||| Sbjct 1820 ATGTTTTATAGGATAAATCAGGTCCAGGATTGCAAAATACGATACTTGGAATCCCGCCTT 1879 Query 1715 TAATTTGAACTGGCTTTCCGTATTTTGTATTGCTTTGCCAGTCTCTTTGGGCCCCCATGA 1774 ||||||||| || |||||||| |||| |||| ||||| | || || | || | || Sbjct 1880 TAATTTGAATTGATTTTCCGTACTTTGCATTGACCTGCCAATGTCGCTGTACGCCTACGA 1939 Query 1775 ATTCCTTAAAGTGCT------TTAAATAGTGGGGGTCGACATCATCAATGACGTTATACC 1828 | | | | | | || ||||||| | || ||| || || || |||||||||| Sbjct 1940 ACTGTTGATAATACTTTTTAATTAAATAATTCGGAGGGACGTCGTCGATAACGTTATACC 1999 Query 1829 ATGCGTCATT 1838 |||| ||||| Sbjct 2000 ATGCATCATT 2009 >seq20728 Length=3653 Score = 80.6 bits (88), Expect = 5e-12 Identities = 104/143 (73%), Gaps = 7/143 (5%) Strand=Plus/Plus Query 1702 GGAATCCCACCTTTAATTTGAACTGGCTTTCCGTATTTTGTATTGCTTTGCCAGTCTCTT 1761 |||||||| ||||||||||||| ||| |||||||| |||| |||| |||| || | Sbjct 1442 GGAATCCCCCCTTTAATTTGAAATGGTTTTCCGTACTTTGCATTGGCCTGCC-GTTGCGC 1500 Query 1762 TGGGCCCCCATGAATTCCTTAAAGTGCT------TTAAATAGTGGGGGTCGACATCATCA 1815 || || || | ||| | | | | |||| ||||||| | || ||| ||||| Sbjct 1501 TGTGCGCCTACGAACTGTTGATAATGCTTTTTAATTAAATAATTCGGAGGGACGTCATCG 1560 Query 1816 ATGACGTTATACCATGCGTCATT 1838 ||||||||||| ||||| ||||| Sbjct 1561 ATGACGTTATATCATGCATCATT 1583 >seq4104 Length=64936 Score = 80.6 bits (88), Expect = 5e-12 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 1673 CGGGCCCTGGATTGCAGAGAAAGATAGTGGGAATCCCACCTTTAATTTGAACTGGCTTTC 1732 |||| || |||||||| || | |||| | |||||||| ||||||||||||||||| |||| Sbjct 20832 CGGGTCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTGGTTTTC 20773 Query 1733 CGTATTTTGTAT 1744 |||| |||| || Sbjct 20772 CGTACTTTGCAT 20761 >seq442 Length=237535 Score = 80.6 bits (88), Expect = 5e-12 Identities = 121/170 (71%), Gaps = 8/170 (5%) Strand=Plus/Plus Query 1675 GGCCCTGGATTGCAGAGAAAGATAGTGGGAATCCCACCTTTAATTTGAACTGGCTTTCCG 1734 || || |||||||| || |||| | |||||| | |||||||||||||||| |||||| Sbjct 22778 GGTCCAGGATTGCAAAGTTCGATACTTGGAATCTCGCCTTTAATTTGAACTGATTTTCCG 22837 Query 1735 TATTTTGTATTGCTTTGCCAGTCTCTTTGGGCCCCCATGAATTCCTTAAAGTGCT----- 1789 || |||| |||| ||| ||| || ||| || || | ||| | | | | |||| Sbjct 22838 TACTTTGCATTGGCCTGCTAGTGTCGTTGTGCGCCTACGAACTGTTAATAATGCTTTTTA 22897 Query 1790 -TTAAATAGTGGGGGTCGACATCATCAATGACGTTATACCATGCGTCATT 1838 ||||||| | | ||| || || || |||||||||| ||| ||||| Sbjct 22898 ATTAAATAATTCGAAGGGACGTC-TCGATAACGTTATACC-TGCATCATT 22945 >seq30129 Length=3650 Score = 78.8 bits (86), Expect = 2e-11 Identities = 78/101 (77%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 1675 GGCCCTGGATTGCAGAGAAAGATAGTGGGAATCCCACCTTTAATTTGAACTGGCTTTCCG 1734 || || |||||||| || | |||| | |||||||| ||||||||||||||| | |||||| Sbjct 2371 GGTCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTCGTTTTCCG 2430 Query 1735 TATTTTGTATTGCTTTGCCAGTCTCTTTGGGCCCCCATGAA 1775 || |||| |||| ||||| | || || || || | ||| Sbjct 2431 TACTTTGCATTGGCCTGCCAATTTCGCTGTGCGCCTACGAA 2471 >seq815 Length=151552 Score = 78.8 bits (86), Expect = 2e-11 Identities = 119/170 (70%), Gaps = 6/170 (4%) Strand=Plus/Minus Query 1675 GGCCCTGGATTGCAGAGAAAGATAGTGGGAATCCCACCTTTAATTTGAACTGGCTTTCCG 1734 || || |||||||| || | ||| | |||||||| |||||||||||| | || ||| || Sbjct 85424 GGTCCAGGATTGCAAAGTACAATACTTGGAATCCCGCCTTTAATTTGACCGGGTTTTTCG 85365 Query 1735 TATTTTGTATTGCTTTGCCAGTCTCTTTGGGCCCCCATGAATTCCTTAAAGTGCT----- 1789 || |||| |||| | ||||| | || || || | ||| | | | | | || Sbjct 85364 TACTTTGCATTGGCCTTCCAGTTGCGCTGTGCGCCTACGAACTATTGATAATACTTCTAA 85305 Query 1790 -TTAAATAGTGGGGGTCGACATCATCAATGACGTTATACCATGCGTCATT 1838 ||||||| | | ||| || || ||||||||||||||||| ||||| Sbjct 85304 ATTAAATAATTCAGAGAGACGTCGTCGATGACGTTATACCATGCATCATT 85255 >seq3059 Length=182465 Score = 77.0 bits (84), Expect = 6e-11 Identities = 60/72 (83%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 1675 GGCCCTGGATTGCAGAGAAAGATAGTGGGAATCCCACCTTTAATTTGAACTGGCTTTCCG 1734 || || |||||||| || | |||| | |||||||| ||||||||||||| ||| |||||| Sbjct 20419 GGTCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAATTGGTTTTCCG 20360 Query 1735 TATTTTGTATTG 1746 || |||| |||| Sbjct 20359 TAATTTGCATTG 20348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8733840575700