Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_010837.1 Length=2666 Score E Sequences producing significant alignments: (Bits) Value seq4295 111 3e-21 seq1010 107 3e-20 seq5493 100 5e-18 seq33 98.7 2e-17 seq5745 96.9 6e-17 seq1993 95.1 2e-16 seq6801 91.5 2e-15 seq77518 84.2 4e-13 seq54129 84.2 4e-13 seq22495 84.2 4e-13 seq4104 84.2 4e-13 seq3283 84.2 4e-13 seq3059 84.2 4e-13 seq35612 80.6 4e-12 seq30129 80.6 4e-12 >seq4295 Length=67413 Score = 111 bits (122), Expect = 3e-21 Identities = 118/154 (77%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 1602 GGATTGCAAAGCACGATGCATGGGATGCCCCCTTTAATTTGAACTGGTTTACCGTATTTA 1661 |||||| | |||||||| |||||||| ||||||||||||||| ||||||||||||| || Sbjct 46843 GGATTGTAGAGCACGATTCATGGGATTCCCCCTTTAATTTGATCTGGTTTACCGTACTTG 46784 Query 1662 CAATTTGACTGCCAGTCCTTCTGGGCCCCAATTAACTCTTTCCAGTGTTTCATCTTTAAA 1721 |||||| | ||| | | ||||||| |||| | |||||| || | ||| ||| ||| Sbjct 46783 GCATTTGAGTTCCAATTGTACTGGGCCACAATGAGCTCTTTTCAATATTTTTTCTGCAAA 46724 Query 1722 TA--TTTGGGGTCCACGTCATCAATAATATTGTA 1753 || | | | | |||||||| |||| ||||| Sbjct 46723 TAGGATAGAGAT--ACGTCATCTATAACGTTGTA 46692 >seq1010 Length=204159 Score = 107 bits (118), Expect = 3e-20 Identities = 186/269 (69%), Gaps = 1/269 (0%) Strand=Plus/Minus Query 1603 GATTGCAAAGCACGATGCATGGGATGCCCCCTTTAATTTGAACTGGTTTACCGTATTTAC 1662 ||||||| |||||||| ||| |||| | |||||||||| ||||||||||||||| ||| Sbjct 40914 GATTGCAGAGCACGATACATAGGATTCTCCCTTTAATTAAAACTGGTTTACCGTACTTAG 40855 Query 1663 AATTTGACTGCCAGTCCTTCTGGGCCCCAATTAACTCTTTCCAGTG-TTTCATCTTTAAA 1721 |||||| ||||| | | |||| ||| ||| | ||||||||| || ||| | | ||| Sbjct 40854 CATTTGATTGCCAATTGTACTGGACCCTAATGAGCTCTTTCCAATGATTTTTTTTGCAAA 40795 Query 1722 TATTTGGGGTCCACGTCATCAATAATATTGTAGTGTGCTTCGTTGGAATAGCACTTAGGG 1781 || | ||||||||| |||| ||| || ||| | || ||| | | || | Sbjct 40794 TAGGATAGAGACACGTCATCTATAACATTATACCATGCATTATTCGAAAATGATTTTGAA 40735 Query 1782 TTAAAGTCTAGGTGACCACTTAAATAATTGTGGACCCCTAAAGCACCGGCCCACATCGTC 1841 ||||| |||| | || ||| || || || ||||||| | |||| || ||| Sbjct 40734 TTAAAATCTATGAAGCCCATTATGTAGTTATGTGGGCCTAAAGATCGTTCCCATATTGTC 40675 Query 1842 TTCCCTGTTCGAGAATCACCTTCAATTAT 1870 || || ||| || |||||| | ||| Sbjct 40674 TTTCCAATTCTAGTTGGACCTTCTAATAT 40646 Score = 104 bits (114), Expect = 4e-19 Identities = 163/225 (72%), Gaps = 10/225 (4%) Strand=Plus/Plus Query 1493 ATAGAGGGTGGTGTTGAGAAAGACGAATTTCGCATTGTGCTT-TGTCCAGTTATTTAATC 1551 ||||| || |||||||| ||||| ||||| |||| | || ||||||||| || | | Sbjct 36376 ATAGAAGGGGGTGTTGACAAAGAAGAATTCTACATT-TCCTAATGTCCAGTTTTTCCAAC 36434 Query 1552 CTGAGTTTTCCTCTCTGTCT-AGGAACCTTTTATAGCTGGCCCCC----TCGCCAGGATT 1606 | | ||| | ||| ||| | || || |||||| || | || || ||||| Sbjct 36435 TTAAATTTACATCT-TGTTTGAGAAAAGATTTATA-CTAATATTCGGTGTC-CCTGGATT 36491 Query 1607 GCAAAGCACGATGCATGGGATGCCCCCTTTAATTTGAACTGGTTTACCGTATTTACAATT 1666 ||| |||||||| |||||||| || |||||||||||||| |||||||||| || || Sbjct 36492 GCAGAGCACGATACATGGGATTTCCTCTTTAATTTGAACTAGTTTACCGTACTTGACATG 36551 Query 1667 TGACTGCCAGTCCTTCTGGGCCCCAATTAACTCTTTCCAGTGTTT 1711 ||| ||||| | | || ||||| ||| | ||||||||| | ||| Sbjct 36552 TGATTGCCAATTGTGCTAGGCCCTAATCAGCTCTTTCCAATTTTT 36596 >seq5493 Length=32325 Score = 100 bits (110), Expect = 5e-18 Identities = 115/154 (75%), Gaps = 7/154 (5%) Strand=Plus/Minus Query 1602 GGATTGCAAAGCACGATGCATGGGATGCCCCCTTTAATTTGAACTGGTTTACCGTATTTA 1661 |||||||| | ||| || |||| ||| || | |||||||||||||||||||||||| || Sbjct 31559 GGATTGCACATCACAATACATGTGATTCCACTTTTAATTTGAACTGGTTTACCGTACTTC 31500 Query 1662 CAATTTGACTGCCAGTCCTTCTGGGCCCCAATTAACTCTTTCCAGTGTTTCATCTTT--A 1719 |||||| ||||||| | || | || || || |||||||||| | ||||| | Sbjct 31499 ACATTTGATTGCCAGTTGTATTGAGACCTAAGTAGCTCTTTCCAG-----CTTCTTTGCA 31445 Query 1720 AATATTTGGGGTCCACGTCATCAATAATATTGTA 1753 |||| | || ||||||||||| || ||||| Sbjct 31444 GATATGTCGGTGATACGTCATCAATGATGTTGTA 31411 >seq33 Length=454124 Score = 98.7 bits (108), Expect = 2e-17 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 1599 CCAGGATTGCAAAGCACGATGCATGGGATGCCCCCTTTAATTTGAACTGGTTTACCGTAT 1658 |||||||||||||||||||| ||||| || || | |||||||||||||||||| ||||| Sbjct 403302 CCAGGATTGCAAAGCACGATACATGGAATCCCGCTTTTAATTTGAACTGGTTTTCCGTAC 403243 Query 1659 TTACAATTTGACTGCCAGT 1677 || |||||||||||||| Sbjct 403242 TTTGCATTTGACTGCCAGT 403224 >seq5745 Length=45059 Score = 96.9 bits (106), Expect = 6e-17 Identities = 195/287 (68%), Gaps = 13/287 (5%) Strand=Plus/Plus Query 1493 ATAGAGGGTGGTGTTGAGAAAGACGAATTTCGCATTGTGCTTTGTCCA-GTTATTTAATC 1551 |||||| | ||||| || ||| |||| ||||| || ||| | | | | |||| Sbjct 43432 ATAGAGAGGGGTGTCGATGAAGTGTAATTCAGCATTTTGTAAAGTCAACGATTTCTAATT 43491 Query 1552 CTGAGTTTTCCTCTCTGTCTAGGAACCTTTTATAG-------CTGGCCCCCTCGCCAGGA 1604 ||| ||| ||| | |||| |||| |||||| |||| |||| ||||| Sbjct 43492 -TGAATTTGAATCTATATCTAAGAACGCTTTATAAGATAAATCTGGACCCC----CAGGA 43546 Query 1605 TTGCAAAGCACGATGCATGGGATGCCCCCTTTAATTTGAACTGGTTTACCGTATTTACAA 1664 ||||||| |||||| ||||| || || |||||||||||||||||||| ||||| || | Sbjct 43547 TTGCAAATCACGATACATGGAATCCCACCTTTAATTTGAACTGGTTTGCCGTACTTTGCA 43606 Query 1665 TTTGACTGCCAGTCCTTCTGGGCCCCAATTAACTCTTTCCAGTGTTTCATCTTTAAATAT 1724 ||||||||||| | || || || || |||| || | ||||| | ||||||| Sbjct 43607 TTTGACTGCCAATTGCATTGTGCTCCTATGAACTGTTGATAATGTTTTTTAATTAAATAA 43666 Query 1725 TTGGGGTCCACGTCATCAATAATATTGTAGTGTGCTTCGTTGGAATA 1771 || | ||||||||| | || || ||| ||||| || || Sbjct 43667 GCTGGAGGGATGTCATCAATGACGTTATACCATGCGTCGTTCGATTA 43713 >seq1993 Length=81530 Score = 95.1 bits (104), Expect = 2e-16 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 1596 TCGCCAGGATTGCAAAGCACGATGCATGGGATGCCCCCTTTAATTTGAACTGGTTTACCG 1655 || |||||||||||||||||||| ||||| || || ||||||||||||||||||| ||| Sbjct 74406 TCCCCAGGATTGCAAAGCACGATACATGGAATCCCGTCTTTAATTTGAACTGGTTTGCCG 74347 Query 1656 TATTTACAATTTGACTGCCA 1675 || || |||||||||||| Sbjct 74346 TACTTTGCATTTGACTGCCA 74327 >seq6801 Length=49729 Score = 91.5 bits (100), Expect = 2e-15 Identities = 138/193 (72%), Gaps = 14/193 (7%) Strand=Plus/Plus Query 1493 ATAGAGGGTGGTGTTGAGAAAGACGAATTTCGCATTGTGCTTTGTCCA-GTTATTTAATC 1551 |||||||| |||||||| || |||||| ||||| || ||||| | | | ||| Sbjct 46986 ATAGAGGG-GGTGTTGACGAAATGGAATTTTGCATTTTGTCAAGTCCAAGATTTCCAATT 47044 Query 1552 CTGAGTTTTCCTCTCTGTCTAGGAACCTTTTATAG-------CTGGCCCCCTCGCCAGGA 1604 ||| ||| | | || | |||| ||||||| |||| ||||| |||| Sbjct 47045 -TGAATTTGAATATAAATCCAAGAACGCTTTATAGGACAAATCTGGACCCCT----AGGA 47099 Query 1605 TTGCAAAGCACGATGCATGGGATGCCCCCTTTAATTTGAACTGGTTTACCGTATTTACAA 1664 ||||||| ||||| ||||| || || |||||||||||||||||||| ||||| || | Sbjct 47100 GTGCAAAGTACGATACATGGAATCCCGCCTTTAATTTGAACTGGTTTGCCGTACTTTGCA 47159 Query 1665 TTTGACTGCCAGT 1677 ||||||||| ||| Sbjct 47160 TTTGACTGCTAGT 47172 >seq77518 Length=14724 Score = 84.2 bits (92), Expect = 4e-13 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 1599 CCAGGATTGCAAAGCACGATGCATGGGATGCCCCCTTTAATTTGAACTGGTTTACCGTAT 1658 |||||||||||||| ||||| ||||| || || |||||||||||||||| ||| |||| Sbjct 2400 CCAGGATTGCAAAGTACGATACATGGAATCCCGCCTTTAATTTGAACTGATTTTTCGTAC 2341 Query 1659 TTACAATTTGACTGCCAGT 1677 || ||||||||| |||| Sbjct 2340 TTTGCATTTGACTGTCAGT 2322 >seq54129 Length=2260 Score = 84.2 bits (92), Expect = 4e-13 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 1599 CCAGGATTGCAAAGCACGATGCATGGGATGCCCCCTTTAATTTGAACTGGTTTACCGTAT 1658 |||||||||||||| ||||| | ||| || || ||||||||||||| |||||| ||||| Sbjct 2257 CCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAATTGGTTTTCCGTAC 2198 Query 1659 TTACAATTTGACTGCCAGTCCTTCTGGGCCCCAATTAACTCTTTCCAGTGTTTCATCTTT 1718 || ||| | ||| |||| | ||| || || | |||| || | || ||| | || Sbjct 2197 TTTGCATTGGCCTGTCAGTTGTGCTGTGCGCCTACGAACTGTTGGTAATGCTTCTTAATT 2138 Query 1719 AAATATTTGGG 1729 ||||| || || Sbjct 2137 AAATAATTCGG 2127 >seq22495 Length=567 Score = 84.2 bits (92), Expect = 4e-13 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 1599 CCAGGATTGCAAAGCACGATGCATGGGATGCCCCCTTTAATTTGAACTGGTTTACCGTAT 1658 |||||||||||||| ||||| | | | || || | |||||||||||||||||| ||||| Sbjct 367 CCAGGATTGCAAAGTACGATACTTAGAATCCCGCATTTAATTTGAACTGGTTTTCCGTAC 308 Query 1659 TTACAATTTGACTGCCAGTCCTTCTGGGCCCCAATTAACTCTTTCCAGTGTTTCATCTTT 1718 || ||| | |||||||| ||| || || | |||| || || || ||| | || Sbjct 307 TTTGCATTGGCCTGCCAGTTGCGCTGTGCGCCTACGAACTGTTGACAATGCTTCTTAATT 248 Query 1719 AAATATTTGGG 1729 ||||| || || Sbjct 247 AAATAATTCGG 237 >seq4104 Length=64936 Score = 84.2 bits (92), Expect = 4e-13 Identities = 124/172 (72%), Gaps = 8/172 (5%) Strand=Plus/Minus Query 1493 ATAGAGGGTGGTGTTGAGAAAGACGAATTTCGCATTGTGCTTTGTCCA-GTTATTTAATC 1551 |||||||| |||||||| ||| ||||| ||||| || ||||| ||| | ||| Sbjct 20933 ATAGAGGGGGGTGTTGACGAAGTGGAATTCTGCATTTTGTAGAGTCCAAGTTTTCCAATA 20874 Query 1552 CTGAGTTTTCCTCTCTGTCTAGGAACCTTTTATAGCTGGCCCCCTCG---CCAGGATTGC 1608 ||| || ||| || | |||| |||||||| | ||| |||||||||| Sbjct 20873 -TGAATTGGACTCCAAATCCAAGAACGTTTTATAG---GATAAATCGGGTCCAGGATTGC 20818 Query 1609 AAAGCACGATGCATGGGATGCCCCCTTTAATTTGAACTGGTTTACCGTATTT 1660 |||| ||||| | ||| || || |||||||||||||||||||| ||||| || Sbjct 20817 AAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTGGTTTTCCGTACTT 20766 >seq3283 Length=49157 Score = 84.2 bits (92), Expect = 4e-13 Identities = 189/284 (67%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 1599 CCAGGATTGCAAAGCACGATGCATGGGATGCCCCCTTTAATTTGAACTGGTTTACCGTAT 1658 |||||||||||||| ||||| | ||| || || |||||||||||||||||||| ||||| Sbjct 2280 CCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTGGTTTCCCGTAC 2221 Query 1659 TTACAATTTGACTGCCAGTCCTTCTGGGCCCCAATTAACTCTTTCCAGTGTTTCATCTTT 1718 || ||| | |||||| | ||| || || | |||| || | || ||| | || Sbjct 2220 TTTGCATTGGCCTGCCAATTTCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTAATT 2161 Query 1719 AAATATTTGGGGTCCACGTCATCAATAATATTGTAGTGTGCTTCGTTGGAATAGCACTTA 1778 ||||| || || ||||| || || | || || ||| || || || || || Sbjct 2160 AAATAATTCGGAGGGACGTCGTCGATGACGTTATACCATGCATCATTTGAGTACGTTTTG 2101 Query 1779 GGGTTAAAGTCTAGGTGACCACTTAAATAATTGTGGACCCCTAAAGCACCGGCCCACATC 1838 | ||||| || | || ||| || ||||| ||||| | || ||||| Sbjct 2100 GAATTAAAATCCATAAATCCCATTATGTAGTTGTGTGGGCCTAATGAACGAGCCCATGCT 2041 Query 1839 GTCTTCCCTGTTCGAGAATCACCTTCAATTATTATACTAATAGG 1882 || |||||| ||| || |||||||| || || || || || Sbjct 2040 GTTTTCCCTATTCTTGATGGGCCTTCAATAATAATGCTCATGGG 1997 >seq3059 Length=182465 Score = 84.2 bits (92), Expect = 4e-13 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 1599 CCAGGATTGCAAAGCACGATGCATGGGATGCCCCCTTTAATTTGAACTGGTTTACCGTAT 1658 |||||||||||||| ||||| | ||| || || ||||||||||||| |||||| ||||| Sbjct 20416 CCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAATTGGTTTTCCGTAA 20357 Query 1659 TTACAATTTGACTGCCAGTCCTTCTGGGCCCCAATTAACTCTTTCCAGTGTTTCATCTTT 1718 || ||| | || ||||| ||| || || | |||| || | || ||| | || Sbjct 20356 TTTGCATTGGCCTACCAGTTGCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTAATT 20297 Query 1719 AAATATTTGGGGTCCACGTCATCAAT 1744 ||||| || || ||||| ||||| Sbjct 20296 AAATAATTCGGAGGGACGTCGTCAAT 20271 >seq35612 Length=1588 Score = 80.6 bits (88), Expect = 4e-12 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 1599 CCAGGATTGCAAAGCACGATGCATGGGATGCCCCCTTTAATTTGAACTGGTTTACCGTAT 1658 |||||||||||||| ||||| | ||| ||||| |||||||||||||||||||| ||||| Sbjct 1510 CCAGGATTGCAAAGTACGATACTTGGAATGCCGCCTTTAATTTGAACTGGTTTTCCGTAC 1569 Query 1659 TT 1660 || Sbjct 1570 TT 1571 >seq30129 Length=3650 Score = 80.6 bits (88), Expect = 4e-12 Identities = 97/131 (74%), Gaps = 1/131 (1%) Strand=Plus/Plus Query 1599 CCAGGATTGCAAAGCACGATGCATGGGATGCCCCCTTTAATTTGAACTGGTTTACCGTAT 1658 |||||||||||||| ||||| | ||| || || ||||||||||||||| |||| ||||| Sbjct 2374 CCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTCGTTTTCCGTAC 2433 Query 1659 TTACAATTTGACTGCCAGTCCTTCTGGGCCCCAATTAACTCTTTCCAGTGTTTCATCTTT 1718 || ||| | |||||| | ||| || || | |||| || | || ||| | || Sbjct 2434 TTTGCATTGGCCTGCCAATTTCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTTATT 2493 Query 1719 AAAT-ATTTGG 1728 |||| |||||| Sbjct 2494 AAATAATTTGG 2504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8414389481680