Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20]
89,515 sequences; 867,455,155 total letters
Query= NC_014066.1
Length=2612
Score E
Sequences producing significant alignments: (Bits) Value
seq5745 113 7e-22
seq1993 109 9e-21
seq33 107 3e-20
seq4295 102 1e-18
seq3283 100 5e-18
seq77518 86.0 1e-13
seq1010 86.0 1e-13
seq54129 82.4 1e-12
seq5493 82.4 1e-12
seq6801 80.6 4e-12
seq3439 80.6 4e-12
seq22495 77.0 5e-11
>seq5745
Length=45059
Score = 113 bits (124), Expect = 7e-22
Identities = 182/259 (70%), Gaps = 2/259 (1%)
Strand=Plus/Plus
Query 1552 CCTGGATTGCAAAGCACGATTGATGGGATACCTCCTTTAATTTGAACTGGCTTGCCGTA- 1610
|| |||||||||| |||||| |||| || || ||||||||||||||||| ||||||||
Sbjct 43541 CCAGGATTGCAAATCACGATACATGGAATCCCACCTTTAATTTGAACTGGTTTGCCGTAC 43600
Query 1611 TTTGCAATTTGACTGCCAATCCTTTTGGGCCCCGATCAATTCTTTCCAGTGCTTTAGCTT 1670
||||| |||||||||||||| ||| || || || || | || | || ||| |
Sbjct 43601 TTTGC-ATTTGACTGCCAATTGCATTGTGCTCCTATGAACTGTTGATAATGTTTTTTAAT 43659
Query 1671 TAGATAGTGCGGTGCGACGTCGTCAATGACGTTATACTCCACTTCGTTTGAATAGACTCG 1730
|| ||| || | || ||| ||||||||||||||| | ||||| || || |
Sbjct 43660 TAAATAAGCTGGAGGGATGTCATCAATGACGTTATACCATGCGTCGTTCGATTATGTTTT 43719
Query 1731 TGGGTTGAAGTCCAGGTGTCCACTGAGGTAGTTATGTGGGCCTAGCGCACGTGCCCACAT 1790
| || || |||| || | | || |||||||| || | || ||||||||| |
Sbjct 43720 CGAATTCAAATCCATAAAGCCCATTATATAATTATGTGGACCCAACGAACGTGCCCAAAC 43779
Query 1791 TGTCTTTCCGGTCCTCGAA 1809
||| || ||| | || |||
Sbjct 43780 TGTTTTACCGATTCTAGAA 43798
>seq1993
Length=81530
Score = 109 bits (120), Expect = 9e-21
Identities = 189/272 (69%), Gaps = 2/272 (1%)
Strand=Plus/Minus
Query 1549 TCACCTGGATTGCAAAGCACGATTGATGGGATACCTCCTTTAATTTGAACTGGCTTGCCG 1608
|| || ||||||||||||||||| |||| || || |||||||||||||||| ||||||
Sbjct 74406 TCCCCAGGATTGCAAAGCACGATACATGGAATCCCGTCTTTAATTTGAACTGGTTTGCCG 74347
Query 1609 TA-TTTGCAATTTGACTGCCAATCCTTTTGGGCCCCGATCAATTCTTTCCAGTGCTTTAG 1667
|| |||||| ||||||||||||| ||| || | | || | || | || |||
Sbjct 74346 TACTTTGCA-TTTGACTGCCAATTGCGTTGTGCTCATACGAACTGTTGATAATGATTTTT 74288
Query 1668 CTTTAGATAGTGCGGTGCGACGTCGTCAATGACGTTATACTCCACTTCGTTTGAATAGAC 1727
||| ||| || | |||||| ||||||||||||||| | | | ||| || ||
Sbjct 74287 AATTAAATAAGCTGGAGGGACGTCATCAATGACGTTATACCACGCGTTGTTCGATTATGT 74228
Query 1728 TCGTGGGTTGAAGTCCAGGTGTCCACTGAGGTAGTTATGTGGGCCTAGCGCACGTGCCCA 1787
| | || || |||| || | | || |||||||| || | || ||||| |||
Sbjct 74227 TTTCGAATTCAAATCCATAAAGCCCATTATATAATTATGTGGACCCAACGAACGTGTCCA 74168
Query 1788 CATTGTCTTTCCGGTCCTCGAATCACCTTCAA 1819
| ||| || ||| | || ||| |||||||
Sbjct 74167 AACTGTTTTACCGATTCTAGAAGGTCCTTCAA 74136
>seq33
Length=454124
Score = 107 bits (118), Expect = 3e-20
Identities = 174/248 (70%), Gaps = 2/248 (1%)
Strand=Plus/Minus
Query 1552 CCTGGATTGCAAAGCACGATTGATGGGATACCTCCTTTAATTTGAACTGGCTTGCCGTA- 1610
|| ||||||||||||||||| |||| || || | ||||||||||||||| || |||||
Sbjct 403302 CCAGGATTGCAAAGCACGATACATGGAATCCCGCTTTTAATTTGAACTGGTTTTCCGTAC 403243
Query 1611 TTTGCAATTTGACTGCCAATCCTTTTGGGCCCCGATCAATTCTTTCCAGTGCTTTAGCTT 1670
|||||| ||||||||||| | || | || | || | || | || ||| |
Sbjct 403242 TTTGCA-TTTGACTGCCAGTTGCACTGTACGCCTACGAACTGTTGATAATGATTTTTAAT 403184
Query 1671 TAGATAGTGCGGTGCGACGTCGTCAATGACGTTATACTCCACTTCGTTTGAATAGACTCG 1730
|| ||| || | |||||| ||||||||||||||| | | ||||| || || ||
Sbjct 403183 TAAATAAGCTGGAGGGACGTCATCAATGACGTTATACCACGCGTCGTTCGAGTATGTTCT 403124
Query 1731 TGGGTTGAAGTCCAGGTGTCCACTGAGGTAGTTATGTGGGCCTAGCGCACGTGCCCACAT 1790
| || || |||| || | | ||| |||||||| || | || ||||||||| |
Sbjct 403123 CGAATTCAAATCCATAAAGCCCATTATGTAATTATGTGGACCCAACGAACGTGCCCAAAC 403064
Query 1791 TGTCTTTC 1798
||| ||||
Sbjct 403063 TGTTTTTC 403056
>seq4295
Length=67413
Score = 102 bits (112), Expect = 1e-18
Identities = 169/244 (69%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1554 TGGATTGCAAAGCACGATTGATGGGATACCTCCTTTAATTTGAACTGGCTTGCCGTATTT 1613
||||||| | ||||||||| ||||||| || |||||||||||| |||| || ||||| ||
Sbjct 46844 TGGATTGTAGAGCACGATTCATGGGATTCCCCCTTTAATTTGATCTGGTTTACCGTACTT 46785
Query 1614 GCAATTTGACTGCCAATCCTTTTGGGCCCCGATCAATTCTTTCCAGTGCTTTAGCTTTAG 1673
| |||||| | ||||| | |||||| | || | ||||| || | ||| || |
Sbjct 46784 GGCATTTGAGTTCCAATTGTACTGGGCCACAATGAGCTCTTTTCAATATTTTTTCTGCAA 46725
Query 1674 ATAGTGCGGTGCGACGTCGTCAATGACGTTATACTCCACTTCGTTTGAATAGACTCGTGG 1733
|||| | | ||||| || || ||||| ||| | | || ||| | | |
Sbjct 46724 ATAGGATAGAGATACGTCATCTATAACGTTGTACCATGCATTATTCGAAAATGATTTCGA 46665
Query 1734 GTTGAAGTCCAGGTGTCCACTGAGGTAGTTATGTGGGCCTAGCGCACGTGCCCACATTGT 1793
|| || |||| | || | | |||||||||||||| || | |||||||| |||||
Sbjct 46664 ATTAAAATCCATGAAGCCCATTATGTAGTTATGTGGGCATAAAGACCGTGCCCATATTGT 46605
Query 1794 CTTT 1797
||||
Sbjct 46604 CTTT 46601
>seq3283
Length=49157
Score = 100 bits (110), Expect = 5e-18
Identities = 166/237 (70%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 1552 CCTGGATTGCAAAGCACGATTGATGGGATACCTCCTTTAATTTGAACTGGCTTGCCGTA- 1610
|| ||||||||||| ||||| ||| || || ||||||||||||||||| || |||||
Sbjct 2280 CCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTGGTTTCCCGTAC 2221
Query 1611 TTTGCAATTTGACTGCCAATCCTTTTGGGCCCCGATCAATTCTTTCCAGTGCTTTAGCTT 1670
||||| ||| | |||||||| || || || | || | || | ||||| |
Sbjct 2220 TTTGC-ATTGGCCTGCCAATTTCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTAAT 2162
Query 1671 TAGATAGTGCGGTGCGACGTCGTCAATGACGTTATACTCCACTTCGTTTGAATAGACTCG 1730
|| ||| | ||| | ||||||||| |||||||||||| | || ||||| || |
Sbjct 2161 TAAATAATTCGGAGGGACGTCGTCGATGACGTTATACCATGCATCATTTGAGTACGTTTT 2102
Query 1731 TGGGTTGAAGTCCAGGTGTCCACTGAGGTAGTTATGTGGGCCTAGCGCACGTGCCCA 1787
| || || |||| ||| | | |||||| |||||||||| | ||| |||||
Sbjct 2101 GGAATTAAAATCCATAAATCCCATTATGTAGTTGTGTGGGCCTAATGAACGAGCCCA 2045
>seq77518
Length=14724
Score = 86.0 bits (94), Expect = 1e-13
Identities = 125/174 (72%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 1552 CCTGGATTGCAAAGCACGATTGATGGGATACCTCCTTTAATTTGAACTGGCTTGCCGTA- 1610
|| ||||||||||| ||||| |||| || || |||||||||||||||| || ||||
Sbjct 2400 CCAGGATTGCAAAGTACGATACATGGAATCCCGCCTTTAATTTGAACTGATTTTTCGTAC 2341
Query 1611 TTTGCAATTTGACTGCCAATCCTTTTGGGCCCCGATCAATTCTTTCCAGTGCTTTAGCTT 1670
|||||| |||||||| || | ||| || || | || | || | |||||| |
Sbjct 2340 TTTGCA-TTTGACTGTCAGTTGCGTTGTGCTCCTACGAACTGTTGATAATGCTTTTTAAT 2282
Query 1671 TAGATAGTGCGGTGCGACGTCGTCAATGACGTTATACTCCACTTCGTTTGAATA 1724
|| ||| || | ||| || ||||||||||||||| | | ||||| || ||
Sbjct 2281 TAAATAAGCTGGAGGGACATCATCAATGACGTTATACCACGCGTCGTTCGAGTA 2228
>seq1010
Length=204159
Score = 86.0 bits (94), Expect = 1e-13
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 1552 CCTGGATTGCAAAGCACGATTGATGGGATACCTCCTTTAATTTGAACTGGCTTGCCGTAT 1611
||||||||||| |||||||| ||||||| | |||||||||||||| | || |||||
Sbjct 36484 CCTGGATTGCAGAGCACGATACATGGGATTTCCTCTTTAATTTGAACTAGTTTACCGTAC 36543
Query 1612 TTGCAATTTGACTGCCAATCCTTTTGGGCCCCGATCAATTCTTTCCA 1658
||| || ||| ||||||| | | ||||| |||| ||||||||
Sbjct 36544 TTGACATGTGATTGCCAATTGTGCTAGGCCCTAATCAGCTCTTTCCA 36590
>seq54129
Length=2260
Score = 82.4 bits (90), Expect = 1e-12
Identities = 124/174 (71%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 1552 CCTGGATTGCAAAGCACGATTGATGGGATACCTCCTTTAATTTGAACTGGCTTGCCGTA- 1610
|| ||||||||||| ||||| ||| || || ||||||||||||| ||| || |||||
Sbjct 2257 CCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAATTGGTTTTCCGTAC 2198
Query 1611 TTTGCAATTTGACTGCCAATCCTTTTGGGCCCCGATCAATTCTTTCCAGTGCTTTAGCTT 1670
||||| ||| | ||| || | | || || || | || | || | ||||| |
Sbjct 2197 TTTGC-ATTGGCCTGTCAGTTGTGCTGTGCGCCTACGAACTGTTGGTAATGCTTCTTAAT 2139
Query 1671 TAGATAGTGCGGTGCGACGTCGTCAATGACGTTATACTCCACTTCGTTTGAATA 1724
|| ||| | ||| | ||| ||||| |||||||||||| || || ||||| ||
Sbjct 2138 TAAATAATTCGGAGGGACATCGTCGATGACGTTATACCATACATCATTTGAGTA 2085
>seq5493
Length=32325
Score = 82.4 bits (90), Expect = 1e-12
Identities = 113/155 (73%), Gaps = 5/155 (3%)
Strand=Plus/Minus
Query 1554 TGGATTGCAAAGCACGATTGATGGGATACCTCCTTTAATTTGAACTGGCTTGCCGTATTT 1613
||||||||| | ||| || ||| ||| || | ||||||||||||||| || ||||| ||
Sbjct 31560 TGGATTGCACATCACAATACATGTGATTCCACTTTTAATTTGAACTGGTTTACCGTACTT 31501
Query 1614 GCAATTTGACTGCCAATCCTTTTGGGCCCCGATCAATTCTTTCCAG-TGCTTTAGCTTTA 1672
|||||| ||||| | | ||| | || | | ||||||||| | |||| || |
Sbjct 31500 CACATTTGATTGCCAGTTGTATTGAGACCTAAGTAGCTCTTTCCAGCTTCTTT-GC---A 31445
Query 1673 GATAGTGCGGTGCGACGTCGTCAATGACGTTATAC 1707
|||| ||||| ||||| ||||||| ||| |||
Sbjct 31444 GATATGTCGGTGATACGTCATCAATGATGTTGTAC 31410
>seq6801
Length=49729
Score = 80.6 bits (88), Expect = 4e-12
Identities = 63/73 (86%), Gaps = 2/73 (3%)
Strand=Plus/Plus
Query 1555 GGATTGCAAAGCACGATTGATGGGATACCTCCTTTAATTTGAACTGGCTTGCCGTA-TTT 1613
||| ||||||| ||||| |||| || || ||||||||||||||||| |||||||| |||
Sbjct 47097 GGAGTGCAAAGTACGATACATGGAATCCCGCCTTTAATTTGAACTGGTTTGCCGTACTTT 47156
Query 1614 GCAATTTGACTGC 1626
|| ||||||||||
Sbjct 47157 GC-ATTTGACTGC 47168
>seq3439
Length=62978
Score = 80.6 bits (88), Expect = 4e-12
Identities = 159/233 (68%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 1556 GATTGCAAAGCACGATTGATGGGATACCTCCTTTAATTTGAACTGGCTTGCCGTA-TTTG 1614
|||||||||| ||||| ||| || || ||||||||||||||||| || ||||| ||||
Sbjct 956 GATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTGGTTTTCCGTACTTTG 897
Query 1615 CAATTTGACTGCCAATCCTTTTGGGCCCCGATCAATTCTTTCCAGTGCTTTAGCTTTAGA 1674
| || | ||||||| || || || | || | || | ||||| ||| |
Sbjct 896 C-GTTGGCATGCCAATTTCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTAATTAAA 838
Query 1675 TAGTGCGGTGCGACGTCGTCAATGACGTTATACTCCACTTCGTTTGAATAGACTCGTGGG 1734
|| | ||| | ||| || || |||||||||||| | || ||||| || | |
Sbjct 837 TAATTCGGAGGGACATCATCGATGACGTTATACCATGCATCATTTGAGTACGTTTTGGAA 778
Query 1735 TTGAAGTCCAGGTGTCCACTGAGGTAGTTATGTGGGCCTAGCGCACGTGCCCA 1787
|| || |||| ||| | | |||||| |||||||||| | ||| |||||
Sbjct 777 TTAAAATCCATAAATCCCATTATGTAGTTGTGTGGGCCTAATGAACGAGCCCA 725
>seq22495
Length=567
Score = 77.0 bits (84), Expect = 5e-11
Identities = 153/224 (68%), Gaps = 2/224 (1%)
Strand=Plus/Minus
Query 1552 CCTGGATTGCAAAGCACGATTGATGGGATACCTCCTTTAATTTGAACTGGCTTGCCGTA- 1610
|| ||||||||||| ||||| | | || || | ||||||||||||||| || |||||
Sbjct 367 CCAGGATTGCAAAGTACGATACTTAGAATCCCGCATTTAATTTGAACTGGTTTTCCGTAC 308
Query 1611 TTTGCAATTTGACTGCCAATCCTTTTGGGCCCCGATCAATTCTTTCCAGTGCTTTAGCTT 1670
||||| ||| | |||||| | || || || | || | || || ||||| |
Sbjct 307 TTTGC-ATTGGCCTGCCAGTTGCGCTGTGCGCCTACGAACTGTTGACAATGCTTCTTAAT 249
Query 1671 TAGATAGTGCGGTGCGACGTCGTCAATGACGTTATACTCCACTTCGTTTGAATAGACTCG 1730
|| ||| | ||| | || ||| || |||||||||||| | || ||||| || |
Sbjct 248 TAAATAATTCGGAGGGATGTCATCGATGACGTTATACCATGCATCATTTGAGTACGTTTT 189
Query 1731 TGGGTTGAAGTCCAGGTGTCCACTGAGGTAGTTATGTGGGCCTA 1774
| || || |||| ||| | | |||||| ||||||||||
Sbjct 188 GGAATTAAAATCCAAAAATCCTATTATGTAGTTGTGTGGGCCTA 145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8241753831220
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