Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20]
89,515 sequences; 867,455,155 total letters
Query= NC_014794.1
Length=2627
Score E
Sequences producing significant alignments: (Bits) Value
seq33 127 3e-26
seq3283 125 1e-25
seq22495 116 6e-23
seq3439 113 7e-22
seq5745 111 3e-21
seq54129 109 9e-21
seq4295 105 1e-19
seq1993 105 1e-19
seq77518 98.7 2e-17
seq953 93.3 7e-16
seq6801 91.5 2e-15
seq5493 91.5 2e-15
seq1010 89.7 9e-15
seq815 89.7 9e-15
seq20728 84.2 4e-13
seq490 84.2 4e-13
seq3059 80.6 4e-12
seq442 80.6 4e-12
>seq33
Length=454124
Score = 127 bits (140), Expect = 3e-26
Identities = 172/237 (73%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 1567 CCTGGATTGCAAAGCACGATTGATGGAATCCCTCCTTTAATTTGAACTGGCTTGCCGTA- 1625
|| ||||||||||||||||| |||||||||| | ||||||||||||||| || |||||
Sbjct 403302 CCAGGATTGCAAAGCACGATACATGGAATCCCGCTTTTAATTTGAACTGGTTTTCCGTAC 403243
Query 1626 TTTGCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTT 1685
|||||| ||||||||||||| ||| | || | | | || | || ||| |
Sbjct 403242 TTTGCA-TTTGACTGCCAGTTGCACTGTACGCCTACGAACTGTTGATAATGATTTTTAAT 403184
Query 1686 TAAATATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTTGAAAAAACTCG 1745
|||||| || | |||||||||||||||||||||| | | ||||| || | ||
Sbjct 403183 TAAATAAGCTGGAGGGACGTCATCAATGACGTTATACCACGCGTCGTTCGAGTATGTTCT 403124
Query 1746 GGAATTGAAGTCCAGGTGTCCACTAAGGTAATTGTGTGGGCCTAATGCACGTGCCCA 1802
||||| || |||| || | | |||||| ||||| || || | |||||||||
Sbjct 403123 CGAATTCAAATCCATAAAGCCCATTATGTAATTATGTGGACCCAACGAACGTGCCCA 403067
>seq3283
Length=49157
Score = 125 bits (138), Expect = 1e-25
Identities = 184/258 (71%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 1567 CCTGGATTGCAAAGCACGATTGATGGAATCCCTCCTTTAATTTGAACTGGCTTGCCGTA- 1625
|| ||||||||||| ||||| ||||||||| ||||||||||||||||| || |||||
Sbjct 2280 CCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTGGTTTCCCGTAC 2221
Query 1626 TTTGCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTT 1685
||||| ||| | |||||| | ||| || || | | | || | ||||| |
Sbjct 2220 TTTGC-ATTGGCCTGCCAATTTCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTAAT 2162
Query 1686 TAAATATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTTGAAAAAACTCG 1745
|||||| | ||| | |||||| || |||||||||||| | || ||||| | |
Sbjct 2161 TAAATAATTCGGAGGGACGTCGTCGATGACGTTATACCATGCATCATTTGAGTACGTTTT 2102
Query 1746 GGAATTGAAGTCCAGGTGTCCACTAAGGTAATTGTGTGGGCCTAATGCACGTGCCCACAT 1805
|||||| || |||| ||| | | ||| |||||||||||||||| ||| |||||
Sbjct 2101 GGAATTAAAATCCATAAATCCCATTATGTAGTTGTGTGGGCCTAATGAACGAGCCCATGC 2042
Query 1806 CGTCTTCCCTGTCCTCGA 1823
|| |||||| | || ||
Sbjct 2041 TGTTTTCCCTATTCTTGA 2024
>seq22495
Length=567
Score = 116 bits (128), Expect = 6e-23
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 1567 CCTGGATTGCAAAGCACGATTGATGGAATCCCTCCTTTAATTTGAACTGGCTTGCCGTA- 1625
|| ||||||||||| ||||| | ||||||| | ||||||||||||||| || |||||
Sbjct 367 CCAGGATTGCAAAGTACGATACTTAGAATCCCGCATTTAATTTGAACTGGTTTTCCGTAC 308
Query 1626 TTTGCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTT 1685
|||||| || | |||||||| ||| || || | | | || || ||||| |
Sbjct 307 TTTGCA-TTGGCCTGCCAGTTGCGCTGTGCGCCTACGAACTGTTGACAATGCTTCTTAAT 249
Query 1686 TAAATATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTTGAAAAAACTCG 1745
|||||| | ||| | || |||||| |||||||||||| | || ||||| | |
Sbjct 248 TAAATAATTCGGAGGGATGTCATCGATGACGTTATACCATGCATCATTTGAGTACGTTTT 189
Query 1746 GGAATTGAAGTCCAGGTGTCCACTAAGGTAATTGTGTGGGCCTAATGCACG 1796
|||||| || |||| ||| | | ||| |||||||||||||||| |||
Sbjct 188 GGAATTAAAATCCAAAAATCCTATTATGTAGTTGTGTGGGCCTAATGAACG 138
>seq3439
Length=62978
Score = 113 bits (124), Expect = 7e-22
Identities = 179/254 (70%), Gaps = 2/254 (1%)
Strand=Plus/Minus
Query 1571 GATTGCAAAGCACGATTGATGGAATCCCTCCTTTAATTTGAACTGGCTTGCCGTA-TTTG 1629
|||||||||| ||||| ||||||||| ||||||||||||||||| || ||||| ||||
Sbjct 956 GATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTGGTTTTCCGTACTTTG 897
Query 1630 CAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTTTAAA 1689
| || | ||||| | ||| || || | | | || | ||||| |||||
Sbjct 896 CG-TTGGCATGCCAATTTCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTAATTAAA 838
Query 1690 TATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTTGAAAAAACTCGGGAA 1749
|| | ||| | ||| ||||| |||||||||||| | || ||||| | | ||||
Sbjct 837 TAATTCGGAGGGACATCATCGATGACGTTATACCATGCATCATTTGAGTACGTTTTGGAA 778
Query 1750 TTGAAGTCCAGGTGTCCACTAAGGTAATTGTGTGGGCCTAATGCACGTGCCCACATCGTC 1809
|| || |||| ||| | | ||| |||||||||||||||| ||| ||||| ||
Sbjct 777 TTAAAATCCATAAATCCCATTATGTAGTTGTGTGGGCCTAATGAACGAGCCCATGCTGTT 718
Query 1810 TTCCCTGTCCTCGA 1823
|||||| | || ||
Sbjct 717 TTCCCTATTCTTGA 704
>seq5745
Length=45059
Score = 111 bits (122), Expect = 3e-21
Identities = 195/280 (70%), Gaps = 13/280 (5%)
Strand=Plus/Plus
Query 1531 TCTTTGTCTAGGAAGTCTTTATAA-------CTGGCACCCTCACCTGGATTGCAAAGCAC 1583
||| | |||| ||| |||||||| |||| |||| || |||||||||| |||
Sbjct 43502 TCTATATCTAAGAACGCTTTATAAGATAAATCTGG-ACCCCCA---GGATTGCAAATCAC 43557
Query 1584 GATTGATGGAATCCCTCCTTTAATTTGAACTGGCTTGCCGTA-TTTGCAATTTGACTGCC 1642
||| |||||||||| ||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct 43558 GATACATGGAATCCCACCTTTAATTTGAACTGGTTTGCCGTACTTTGC-ATTTGACTGCC 43616
Query 1643 AGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTTTAAATATTGCGGTGCGA 1702
| | || || || | | | || | || ||| ||||||| || | ||
Sbjct 43617 AATTGCATTGTGCTCCTATGAACTGTTGATAATGTTTTTTAATTAAATAAGCTGGAGGGA 43676
Query 1703 CGTCATCAATGACGTTATACTCCACTTCGTTTGAAAAAACTCGGGAATTGAAGTCCAGGT 1762
||||||||||||||||||| | ||||| || | | ||||| || ||||
Sbjct 43677 TGTCATCAATGACGTTATACCATGCGTCGTTCGATTATGTTTTCGAATTCAAATCCATAA 43736
Query 1763 GTCCACTAAGGTAATTGTGTGGGCCTAATGCACGTGCCCA 1802
|| | | ||||| ||||| || || | |||||||||
Sbjct 43737 AGCCCATTATATAATTATGTGGACCCAACGAACGTGCCCA 43776
>seq54129
Length=2260
Score = 109 bits (120), Expect = 9e-21
Identities = 168/237 (71%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 1567 CCTGGATTGCAAAGCACGATTGATGGAATCCCTCCTTTAATTTGAACTGGCTTGCCGTA- 1625
|| ||||||||||| ||||| ||||||||| ||||||||||||| ||| || |||||
Sbjct 2257 CCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAATTGGTTTTCCGTAC 2198
Query 1626 TTTGCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTT 1685
||||| ||| | ||| |||| | ||| || || | | | || | ||||| |
Sbjct 2197 TTTGC-ATTGGCCTGTCAGTTGTGCTGTGCGCCTACGAACTGTTGGTAATGCTTCTTAAT 2139
Query 1686 TAAATATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTTGAAAAAACTCG 1745
|||||| | ||| | ||| || || |||||||||||| || || ||||| | |
Sbjct 2138 TAAATAATTCGGAGGGACATCGTCGATGACGTTATACCATACATCATTTGAGTATGTTTT 2079
Query 1746 GGAATTGAAGTCCAGGTGTCCACTAAGGTAATTGTGTGGGCCTAATGCACGTGCCCA 1802
|||||| || | || ||| | | ||| |||||| ||| ||||| ||| |||||
Sbjct 2078 GGAATTAAAATTCATAAATCCCATTATGTAGTTGTGTTGGCATAATGAACGAGCCCA 2022
>seq4295
Length=67413
Score = 105 bits (116), Expect = 1e-19
Identities = 169/243 (70%), Gaps = 0/243 (0%)
Strand=Plus/Minus
Query 1569 TGGATTGCAAAGCACGATTGATGGAATCCCTCCTTTAATTTGAACTGGCTTGCCGTATTT 1628
||||||| | ||||||||| |||| || || |||||||||||| |||| || ||||| ||
Sbjct 46844 TGGATTGTAGAGCACGATTCATGGGATTCCCCCTTTAATTTGATCTGGTTTACCGTACTT 46785
Query 1629 GCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTTTAA 1688
| |||||| | ||| | | ||||||| | | || ||||| || | ||| || ||
Sbjct 46784 GGCATTTGAGTTCCAATTGTACTGGGCCACAATGAGCTCTTTTCAATATTTTTTCTGCAA 46725
Query 1689 ATATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTTGAAAAAACTCGGGA 1748
||| | | |||||||| || ||||| ||| | | || ||||| | ||
Sbjct 46724 ATAGGATAGAGATACGTCATCTATAACGTTGTACCATGCATTATTCGAAAATGATTTCGA 46665
Query 1749 ATTGAAGTCCAGGTGTCCACTAAGGTAATTGTGTGGGCCTAATGCACGTGCCCACATCGT 1808
||| || |||| | || | | ||| || ||||||| ||| | |||||||| || ||
Sbjct 46664 ATTAAAATCCATGAAGCCCATTATGTAGTTATGTGGGCATAAAGACCGTGCCCATATTGT 46605
Query 1809 CTT 1811
|||
Sbjct 46604 CTT 46602
>seq1993
Length=81530
Score = 105 bits (116), Expect = 1e-19
Identities = 121/160 (76%), Gaps = 2/160 (1%)
Strand=Plus/Minus
Query 1564 TCACCTGGATTGCAAAGCACGATTGATGGAATCCCTCCTTTAATTTGAACTGGCTTGCCG 1623
|| || ||||||||||||||||| |||||||||| |||||||||||||||| ||||||
Sbjct 74406 TCCCCAGGATTGCAAAGCACGATACATGGAATCCCGTCTTTAATTTGAACTGGTTTGCCG 74347
Query 1624 TA-TTTGCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAG 1682
|| |||||| ||||||||||| | || || | | | | || | || |||
Sbjct 74346 TACTTTGCA-TTTGACTGCCAATTGCGTTGTGCTCATACGAACTGTTGATAATGATTTTT 74288
Query 1683 CTTTAAATATTGCGGTGCGACGTCATCAATGACGTTATAC 1722
||||||| || | ||||||||||||||||||||||
Sbjct 74287 AATTAAATAAGCTGGAGGGACGTCATCAATGACGTTATAC 74248
>seq77518
Length=14724
Score = 98.7 bits (108), Expect = 2e-17
Identities = 126/171 (74%), Gaps = 2/171 (1%)
Strand=Plus/Minus
Query 1567 CCTGGATTGCAAAGCACGATTGATGGAATCCCTCCTTTAATTTGAACTGGCTTGCCGTA- 1625
|| ||||||||||| ||||| |||||||||| |||||||||||||||| || ||||
Sbjct 2400 CCAGGATTGCAAAGTACGATACATGGAATCCCGCCTTTAATTTGAACTGATTTTTCGTAC 2341
Query 1626 TTTGCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTT 1685
||||| ||||||||| |||| || || || | | | || | |||||| |
Sbjct 2340 TTTGC-ATTTGACTGTCAGTTGCGTTGTGCTCCTACGAACTGTTGATAATGCTTTTTAAT 2282
Query 1686 TAAATATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTTGA 1736
|||||| || | ||| |||||||||||||||||| | | ||||| ||
Sbjct 2281 TAAATAAGCTGGAGGGACATCATCAATGACGTTATACCACGCGTCGTTCGA 2231
>seq953
Length=224861
Score = 93.3 bits (102), Expect = 7e-16
Identities = 178/259 (69%), Gaps = 4/259 (2%)
Strand=Plus/Plus
Query 1567 CCTGGATTGCAAAGCACGATTGATGGAATCCCTCCTTTAATTTGAACTGGCTTGCCGTA- 1625
|| |||||||||| ||||| ||||||||| ||||||||||||| || || |||||
Sbjct 1843 CCAGGATTGCAAAATACGATACTTGGAATCCCGCCTTTAATTTGAATTGATTTTCCGTAC 1902
Query 1626 TTTGCAATTTGA-CTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCT 1684
|||||| |||| |||||| | ||| | || | | | || | | ||||
Sbjct 1903 TTTGCA--TTGACCTGCCAATGTCGCTGTACGCCTACGAACTGTTGATAATACTTTTTAA 1960
Query 1685 TTAAATATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTTGAAAAAACTC 1744
||||||| | ||| | |||||| || || ||||||||| | || ||||| | |
Sbjct 1961 TTAAATAATTCGGAGGGACGTCGTCGATAACGTTATACCATGCATCATTTGAGTACGTTT 2020
Query 1745 GGGAATTGAAGTCCAGGTGTCCACTAAGGTAATTGTGTGGGCCTAATGCACGTGCCCACA 1804
||||| || |||| || | | ||| |||||||||||||||| ||| |||||
Sbjct 2021 TCGAATTAAAATCCATAAATCTCATTATGTAGTTGTGTGGGCCTAATGAACGAGCCCATG 2080
Query 1805 TCGTCTTCCCTGTCCTCGA 1823
|| |||||| | || ||
Sbjct 2081 CTGTTTTCCCTATTCTTGA 2099
>seq6801
Length=49729
Score = 91.5 bits (100), Expect = 2e-15
Identities = 68/77 (88%), Gaps = 2/77 (3%)
Strand=Plus/Plus
Query 1570 GGATTGCAAAGCACGATTGATGGAATCCCTCCTTTAATTTGAACTGGCTTGCCGTA-TTT 1628
||| ||||||| ||||| |||||||||| ||||||||||||||||| |||||||| |||
Sbjct 47097 GGAGTGCAAAGTACGATACATGGAATCCCGCCTTTAATTTGAACTGGTTTGCCGTACTTT 47156
Query 1629 GCAATTTGACTGCCAGT 1645
|| |||||||||| |||
Sbjct 47157 GC-ATTTGACTGCTAGT 47172
>seq5493
Length=32325
Score = 91.5 bits (100), Expect = 2e-15
Identities = 115/155 (74%), Gaps = 5/155 (3%)
Strand=Plus/Minus
Query 1569 TGGATTGCAAAGCACGATTGATGGAATCCCTCCTTTAATTTGAACTGGCTTGCCGTATTT 1628
||||||||| | ||| || ||| || || | ||||||||||||||| || ||||| ||
Sbjct 31560 TGGATTGCACATCACAATACATGTGATTCCACTTTTAATTTGAACTGGTTTACCGTACTT 31501
Query 1629 GCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAG-TGCTTTAGCTTTA 1687
|||||| ||||||| | || | || || || ||||||||| | |||| || |
Sbjct 31500 CACATTTGATTGCCAGTTGTATTGAGACCTAAGTAGCTCTTTCCAGCTTCTTT-GC---A 31445
Query 1688 AATATTGCGGTGCGACGTCATCAATGACGTTATAC 1722
|||| ||||| ||||||||||||| ||| |||
Sbjct 31444 GATATGTCGGTGATACGTCATCAATGATGTTGTAC 31410
>seq1010
Length=204159
Score = 89.7 bits (98), Expect = 9e-15
Identities = 169/248 (68%), Gaps = 2/248 (1%)
Strand=Plus/Plus
Query 1567 CCTGGATTGCAAAGCACGATTGATGGAATCCCTCCTTTAATTTGAACTGGCTTGCCGTAT 1626
||||||||||| |||||||| |||| || | |||||||||||||| | || |||||
Sbjct 36484 CCTGGATTGCAGAGCACGATACATGGGATTTCCTCTTTAATTTGAACTAGTTTACCGTAC 36543
Query 1627 TTGCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTTT 1686
||| || ||| ||||| | | || ||||| | || |||||||| | ||| |
Sbjct 36544 TTGACATGTGATTGCCAATTGTGCTAGGCCCTAATCAGCTCTTTCCAAT--TTTTTTTGC 36601
Query 1687 AAATATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTTGAAAAAACTCGG 1746
||||| | | || ||||| |||| |||||| | | | ||||| |
Sbjct 36602 AAATAGGATCGAGACACATCATCTATGAAATTATACCATGCATTAATCGAAAATGATTTC 36661
Query 1747 GAATTGAAGTCCAGGTGTCCACTAAGGTAATTGTGTGGGCCTAATGCACGTGCCCACATC 1806
||||| || |||| | || | | ||| || |||||||||| | |||||||| ||
Sbjct 36662 GAATTAAAATCCATGAAGCCCATTATGTAGTTACGTGGGCCTAAAGATCGTGCCCATATT 36721
Query 1807 GTCTTCCC 1814
||||||||
Sbjct 36722 GTCTTCCC 36729
Score = 86.0 bits (94), Expect = 1e-13
Identities = 169/249 (68%), Gaps = 1/249 (0%)
Strand=Plus/Minus
Query 1567 CCTGGATTGCAAAGCACGATTGATGGAATCCCTCCTTTAATTTGAACTGGCTTGCCGTAT 1626
||| ||||||| |||||||| || | || | ||||||||| |||||| || |||||
Sbjct 40918 CCTAGATTGCAGAGCACGATACATAGGATTCTCCCTTTAATTAAAACTGGTTTACCGTAC 40859
Query 1627 TTGCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTTT 1686
|| |||||| ||||| | | |||| ||| | || |||||||| || ||| ||
Sbjct 40858 TTAGCATTTGATTGCCAATTGTACTGGACCCTAATGAGCTCTTTCCAATGATTTTTTTTG 40799
Query 1687 -AAATATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTTGAAAAAACTCG 1745
||||| | | |||||||| || || |||||| | | || ||||| |
Sbjct 40798 CAAATAGGATAGAGACACGTCATCTATAACATTATACCATGCATTATTCGAAAATGATTT 40739
Query 1746 GGAATTGAAGTCCAGGTGTCCACTAAGGTAATTGTGTGGGCCTAATGCACGTGCCCACAT 1805
||||| || || | | || | | ||| || ||||||||||| | ||| |||| ||
Sbjct 40738 TGAATTAAAATCTATGAAGCCCATTATGTAGTTATGTGGGCCTAAAGATCGTTCCCATAT 40679
Query 1806 CGTCTTCCC 1814
||||| ||
Sbjct 40678 TGTCTTTCC 40670
>seq815
Length=151552
Score = 89.7 bits (98), Expect = 9e-15
Identities = 176/258 (68%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 1567 CCTGGATTGCAAAGCACGATTGATGGAATCCCTCCTTTAATTTGAACTGGCTTGCCGTA- 1625
|| ||||||||||| || || ||||||||| |||||||||||| | || || ||||
Sbjct 85421 CCAGGATTGCAAAGTACAATACTTGGAATCCCGCCTTTAATTTGACCGGGTTTTTCGTAC 85362
Query 1626 TTTGCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTT 1685
|||||| || | || ||||| ||| || || | | | || | | ||| |
Sbjct 85361 TTTGCA-TTGGCCTTCCAGTTGCGCTGTGCGCCTACGAACTATTGATAATACTTCTAAAT 85303
Query 1686 TAAATATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTTGAAAAAACTCG 1745
|||||| | | | | |||||| || |||||||||||| | || ||||| | |
Sbjct 85302 TAAATAATTCAGAGAGACGTCGTCGATGACGTTATACCATGCATCATTTGAGTACGTTTT 85243
Query 1746 GGAATTGAAGTCCAGGTGTCCACTAAGGTAATTGTGTGGGCCTAATGCACGTGCCCACAT 1805
|||||| || |||| ||| | | ||| ||||||| ||||||| ||| ||||| |
Sbjct 85242 GGAATTAAAATCCATAAATCCCATTATGTAGTTGTGTGTGCCTAATAAACGAGCCCATGT 85183
Query 1806 CGTCTTCCCTGTCCTCGA 1823
| |||||| | || ||
Sbjct 85182 TATTTTCCCTATTCTTGA 85165
>seq20728
Length=3653
Score = 84.2 bits (92), Expect = 4e-13
Identities = 162/235 (69%), Gaps = 3/235 (1%)
Strand=Plus/Plus
Query 1590 TGGAATCCCTCCTTTAATTTGAACTGGCTTGCCGTA-TTTGCAATTTGACTGCCAGTCCT 1648
||||||||| ||||||||||||| ||| || ||||| ||||| ||| | ||||| ||
Sbjct 1441 TGGAATCCCCCCTTTAATTTGAAATGGTTTTCCGTACTTTGC-ATTGGCCTGCC-GTTGC 1498
Query 1649 TCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTTTAAATATTGCGGTGCGACGTCAT 1708
||| || || | | | || | |||||| ||||||| | ||| | ||||||||
Sbjct 1499 GCTGTGCGCCTACGAACTGTTGATAATGCTTTTTAATTAAATAATTCGGAGGGACGTCAT 1558
Query 1709 CAATGACGTTATACTCCACTTCGTTTGAAAAAACTCGGGAATTGAAGTCCAGGTGTCCAC 1768
| ||||||||||| | || ||||| | | ||||| || || | ||
Sbjct 1559 CGATGACGTTATATCATGCATCATTTGAGTACGTTTTCGAATTAAAATCTATAAATCTCA 1618
Query 1769 TAAGGTAATTGTGTGGGCCTAATGCACGTGCCCACATCGTCTTCCCTGTCCTCGA 1823
| | ||| ||||||||| |||||| ||| ||||| || |||||| | || ||
Sbjct 1619 TTATGTAGTTGTGTGGGACTAATGAACGAGCCCATGCTGTTTTCCCTATTCTTGA 1673
>seq490
Length=137872
Score = 84.2 bits (92), Expect = 4e-13
Identities = 109/151 (72%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 1572 ATTGCAAAGCACGATTGATGGAATCCCTCCTTTAATTTGAACTGGCTTGCCGTATTTGCA 1631
|||||| || || |||||||| || || ||||||||||| | |||||| | ||||| |
Sbjct 70618 ATTGCATAGGACAATTGATGGTATTCCACCTTTAATTTGTATTGGCTTAGCATATTTTGA 70559
Query 1632 ATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTTTAAATA 1691
|| | |||||| | || |||||| | ||| || |||| ||||| | | | |
Sbjct 70558 ATCAGCTTGCCAGCTATGCTTGGCCCCAATAAGCTCCCTCCAATGCTTCTTCCAGAGAGA 70499
Query 1692 TTGCGGTGCGACGTCATCAATGACGTTATAC 1722
| || | ||||||||| ||||||||||||
Sbjct 70498 TGCTGGAGGGACGTCATCTATGACGTTATAC 70468
>seq3059
Length=182465
Score = 80.6 bits (88), Expect = 4e-12
Identities = 108/148 (73%), Gaps = 2/148 (1%)
Strand=Plus/Minus
Query 1567 CCTGGATTGCAAAGCACGATTGATGGAATCCCTCCTTTAATTTGAACTGGCTTGCCGT-A 1625
|| ||||||||||| ||||| ||||||||| ||||||||||||| ||| || |||| |
Sbjct 20416 CCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAATTGGTTTTCCGTAA 20357
Query 1626 TTTGCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTT 1685
||||| ||| | || ||||| ||| || || | | | || | ||||| |
Sbjct 20356 TTTGC-ATTGGCCTACCAGTTGCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTAAT 20298
Query 1686 TAAATATTGCGGTGCGACGTCATCAATG 1713
|||||| | ||| | |||||| ||||||
Sbjct 20297 TAAATAATTCGGAGGGACGTCGTCAATG 20270
>seq442
Length=237535
Score = 80.6 bits (88), Expect = 4e-12
Identities = 179/260 (69%), Gaps = 8/260 (3%)
Strand=Plus/Plus
Query 1567 CCTGGATTGCAAAGCACGATTGATGGAATCCCTCCTTTAATTTGAACTGGCTTGCCGTA- 1625
|| ||||||||||| |||| ||||||| | |||||||||||||||| || |||||
Sbjct 22781 CCAGGATTGCAAAGTTCGATACTTGGAATCTCGCCTTTAATTTGAACTGATTTTCCGTAC 22840
Query 1626 TTTGCAATTTGACTGCCA--GTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGC 1683
||||| ||| | |||| | ||| || || ||| | ||| | || | ||||||
Sbjct 22841 TTTGC-ATTGGCCTGCTAGTGTCGTTGTGCGCCTAC-GAA-CTGTTAATAATGCTTTTTA 22897
Query 1684 TTTAAATATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTTGAAAAAACT 1743
||||||| | || | |||||| || || ||||||||| | | || ||||| | |
Sbjct 22898 ATTAAATAATTCGAAGGGACGTC-TCGATAACGTTATAC-CTGCATCATTTGAGTACGTT 22955
Query 1744 CGGGAATTGAAGTCCAGGTGTCCACTAAGGTAATTGTGTGGGCCTAATGCACGTGCCCAC 1803
|||| || || | || | | ||| |||||||||||||||| ||| || ||
Sbjct 22956 TTCAAATTAAAATCAATAAATCTCATTATGTAGTTGTGTGGGCCTAATGAACGAGCTCAT 23015
Query 1804 ATCGTCTTCCCTGTCCTCGA 1823
|| |||||| | || ||
Sbjct 23016 GCTGTTTTCCCTATTCTTGA 23035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8289708178570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |