Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_014847.1 Length=2723 Score E Sequences producing significant alignments: (Bits) Value seq3283 86.0 1e-13 >seq3283 Length=49157 Score = 86.0 bits (94), Expect = 1e-13 Identities = 180/267 (67%), Gaps = 10/267 (4%) Strand=Plus/Minus Query 1566 GAGGAAGACGAATGCTGCATTTTTTAAAGCCCACGCTTTTAAAGCTGAGTTCTTTGCCTC 1625 || |||| |||| ||||||||| || || ||| | ||| || ||| || || Sbjct 2371 GACGAAGTGGAATTCTGCATTTTGTAGAGTCCAAGTTTTCCAATATGAATTGGACTCCAA 2312 Query 1626 GTCCGAGAACTCTTTATAGCTTCCGTTGGGGCCTGGATTGCAGAGGAAGATTGTTGGTAT 1685 ||| ||||| ||||||| | | || || |||||||| || | ||| |||| || Sbjct 2311 ATCCAAGAACGTTTTATAGGATTGATCAGGTCCAGGATTGCAAAGTACGATACTTGGAAT 2252 Query 1686 GCCCCCTTTAATGTGAACTGGCTTCCCGTACTTTGTGTCTGATTGCCAA--TCCCTTTGG 1743 || |||||||| |||||||| ||||||||||||| | | |||||| || || || Sbjct 2251 CCCGCCTTTAATTTGAACTGGTTTCCCGTACTTTGCATTGGCCTGCCAATTTCGCTGTGC 2192 Query 1744 GCCTCCATGAATTCTTTAAAGTGTTTC------AGATAATGCGGGTCAACATCATCTATA 1797 |||| | ||| | || | | || ||| | ||||| ||| || || || || Sbjct 2191 GCCT--ACGAACTGTTGATAATGCTTCTTAATTAAATAATTCGGAGGGACGTCGTCGATG 2134 Query 1798 ATGGTGAACCACGCATCGTTTGAATAC 1824 | | | |||| ||||| ||||| ||| Sbjct 2133 ACGTTATACCATGCATCATTTGAGTAC 2107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8596616001610