Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_015962.1 Length=2625 Score E Sequences producing significant alignments: (Bits) Value seq3283 129 1e-26 seq5745 122 1e-24 seq4295 116 6e-23 seq1993 114 2e-22 seq33 114 2e-22 seq3439 113 7e-22 seq77518 111 3e-21 seq5493 107 3e-20 seq1010 105 1e-19 seq54129 104 4e-19 seq22495 104 4e-19 seq815 93.3 7e-16 seq20728 86.0 1e-13 seq953 86.0 1e-13 seq490 82.4 1e-12 seq6801 78.8 2e-11 seq3059 77.0 5e-11 >seq3283 Length=49157 Score = 129 bits (142), Expect = 1e-26 Identities = 185/259 (71%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 1565 CCTGGATTGCAGAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTCCCGTAC 1624 || |||||||| || ||||| ||| ||||| ||||||||||||||||| ||||||||| Sbjct 2280 CCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTGGTTTCCCGTAC 2221 Query 1625 TTGCAATTTGACTGCCAGTCTTTTTGGGCCCCAAGGAGCTCTTTCCAGTGCTTCAACTTT 1684 || ||| | |||||| | | || || || | || || || | |||||| || Sbjct 2220 TTTGCATTGGCCTGCCAATTTCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTAATT 2161 Query 1685 AAGTATTGCGGAGAGACGTCATCAATGACGTTATATTCCA--CTTCGTTCGAGTAAACCT 1742 || || | ||||| |||||| || ||||||||||| ||| | || || ||||| | Sbjct 2160 AAATAATTCGGAGGGACGTCGTCGATGACGTTATA--CCATGCATCATTTGAGTACGTTT 2103 Query 1743 TTGAGTTGAAGTCCAGGTGTCCACTCAGATAATTATGTGGGCCTAAGGCACGAGCCCACA 1802 | || || || |||| ||| | | || || ||||||||||| | ||||||||| Sbjct 2102 TGGAATTAAAATCCATAAATCCCATTATGTAGTTGTGTGGGCCTAATGAACGAGCCCATG 2043 Query 1803 TCGTCTTGCCTGTTCTTGA 1821 || || ||| ||||||| Sbjct 2042 CTGTTTTCCCTATTCTTGA 2024 >seq5745 Length=45059 Score = 122 bits (134), Expect = 1e-24 Identities = 184/260 (71%), Gaps = 4/260 (2%) Strand=Plus/Plus Query 1565 CCTGGATTGCAGAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTCCCGTAC 1624 || |||||||| | |||||| |||| ||||| ||||||||||||||||| || |||||| Sbjct 43541 CCAGGATTGCAAATCACGATACATGGAATCCCACCTTTAATTTGAACTGGTTTGCCGTAC 43600 Query 1625 TTGCAATTTGACTGCCAGTCTTTTTGGGCCCCAAGGAGCTCTTTCCAGTGCTTCAACTTT 1684 || |||||||||||| | ||| || || | || || || | || || || Sbjct 43601 TTTGCATTTGACTGCCAATTGCATTGTGCTCCTATGAACTGTTGATAATGTTTTTTAATT 43660 Query 1685 AAGTATTGCGGAGAGACGTCATCAATGACGTTATATTCCA--CTTCGTTCGAGTAAACCT 1742 || || |||| || |||||||||||||||||| ||| | |||||||| || | Sbjct 43661 AAATAAGCTGGAGGGATGTCATCAATGACGTTATA--CCATGCGTCGTTCGATTATGTTT 43718 Query 1743 TTGAGTTGAAGTCCAGGTGTCCACTCAGATAATTATGTGGGCCTAAGGCACGAGCCCACA 1802 | || || || |||| || | | |||||||||||| || || | ||| ||||| | Sbjct 43719 TCGAATTCAAATCCATAAAGCCCATTATATAATTATGTGGACCCAACGAACGTGCCCAAA 43778 Query 1803 TCGTCTTGCCTGTTCTTGAA 1822 || || || |||| ||| Sbjct 43779 CTGTTTTACCGATTCTAGAA 43798 >seq4295 Length=67413 Score = 116 bits (128), Expect = 6e-23 Identities = 174/245 (71%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 1567 TGGATTGCAGAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTCCCGTACTT 1626 ||||||| ||||||||||| ||||||| || |||||||||||| |||| || |||||||| Sbjct 46844 TGGATTGTAGAGCACGATTCATGGGATTCCCCCTTTAATTTGATCTGGTTTACCGTACTT 46785 Query 1627 GCAATTTGACTGCCAGTCTTTTTGGGCCCCAAGGAGCTCTTTCCAGTGCTTCAACTTTAA 1686 | |||||| | ||| | | |||||| ||| ||||||||| || | || || || Sbjct 46784 GGCATTTGAGTTCCAATTGTACTGGGCCACAATGAGCTCTTTTCAATATTTTTTCTGCAA 46725 Query 1687 GTATTGCGGAGAGACGTCATCAATGACGTTATATTCCA--CTTCGTTCGAGTAAACCTTT 1744 || |||| |||||||| || ||||| || ||| | | ||||| | || Sbjct 46724 ATAGGATAGAGATACGTCATCTATAACGTTGTA--CCATGCATTATTCGAAAATGATTTC 46667 Query 1745 GAGTTGAAGTCCAGGTGTCCACTCAGATAATTATGTGGGCCTAAGGCACGAGCCCACATC 1804 || || || |||| | || | | || |||||||||| ||| | || ||||| || Sbjct 46666 GAATTAAAATCCATGAAGCCCATTATGTAGTTATGTGGGCATAAAGACCGTGCCCATATT 46607 Query 1805 GTCTT 1809 ||||| Sbjct 46606 GTCTT 46602 >seq1993 Length=81530 Score = 114 bits (126), Expect = 2e-22 Identities = 182/261 (70%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 1562 TCACCTGGATTGCAGAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTCCCG 1621 || || |||||||| |||||||| |||| ||||| |||||||||||||||| || ||| Sbjct 74406 TCCCCAGGATTGCAAAGCACGATACATGGAATCCCGTCTTTAATTTGAACTGGTTTGCCG 74347 Query 1622 TACTTGCAATTTGACTGCCAGTCTTTTTGGGCCCCAAGGAGCTCTTTCCAGTGCTTCAAC 1681 ||||| |||||||||||| | ||| || | | || || || | || || Sbjct 74346 TACTTTGCATTTGACTGCCAATTGCGTTGTGCTCATACGAACTGTTGATAATGATTTTTA 74287 Query 1682 TTTAAGTATTGCGGAGAGACGTCATCAATGACGTTATATTCCACTTCGTTCGAGTAAACC 1741 |||| || |||| ||||||||||||||||||||| | | | |||||| || Sbjct 74286 ATTAAATAAGCTGGAGGGACGTCATCAATGACGTTATACCACGCGTTGTTCGATTATGTT 74227 Query 1742 TTTGAGTTGAAGTCCAGGTGTCCACTCAGATAATTATGTGGGCCTAAGGCACGAGCCCAC 1801 || || || || |||| || | | |||||||||||| || || | ||| | ||| Sbjct 74226 TTCGAATTCAAATCCATAAAGCCCATTATATAATTATGTGGACCCAACGAACGTGTCCAA 74167 Query 1802 ATCGTCTTGCCTGTTCTTGAA 1822 | || || || |||| ||| Sbjct 74166 ACTGTTTTACCGATTCTAGAA 74146 >seq33 Length=454124 Score = 114 bits (126), Expect = 2e-22 Identities = 167/236 (71%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 1565 CCTGGATTGCAGAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTCCCGTAC 1624 || |||||||| |||||||| |||| ||||| | ||||||||||||||| || |||||| Sbjct 403302 CCAGGATTGCAAAGCACGATACATGGAATCCCGCTTTTAATTTGAACTGGTTTTCCGTAC 403243 Query 1625 TTGCAATTTGACTGCCAGTCTTTTTGGGCCCCAAGGAGCTCTTTCCAGTGCTTCAACTTT 1684 || |||||||||||||| || | || | || || || | || || || Sbjct 403242 TTTGCATTTGACTGCCAGTTGCACTGTACGCCTACGAACTGTTGATAATGATTTTTAATT 403183 Query 1685 AAGTATTGCGGAGAGACGTCATCAATGACGTTATATTCCACTTCGTTCGAGTAAACCTTT 1744 || || |||| ||||||||||||||||||||| | | ||||||||||| | Sbjct 403182 AAATAAGCTGGAGGGACGTCATCAATGACGTTATACCACGCGTCGTTCGAGTATGTTCTC 403123 Query 1745 GAGTTGAAGTCCAGGTGTCCACTCAGATAATTATGTGGGCCTAAGGCACGAGCCCA 1800 || || || |||| || | | ||||||||||| || || | ||| ||||| Sbjct 403122 GAATTCAAATCCATAAAGCCCATTATGTAATTATGTGGACCCAACGAACGTGCCCA 403067 >seq3439 Length=62978 Score = 113 bits (124), Expect = 7e-22 Identities = 179/255 (70%), Gaps = 4/255 (2%) Strand=Plus/Minus Query 1569 GATTGCAGAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTCCCGTACTTGC 1628 ||||||| || ||||| ||| ||||| ||||||||||||||||| || |||||||| Sbjct 956 GATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTGGTTTTCCGTACTTTG 897 Query 1629 AATTTGACTGCCAGTCTTTTTGGGCCCCAAGGAGCTCTTTCCAGTGCTTCAACTTTAAGT 1688 || | ||||| | | || || || | || || || | |||||| |||| | Sbjct 896 CGTTGGCATGCCAATTTCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTAATTAAAT 837 Query 1689 ATTGCGGAGAGACGTCATCAATGACGTTATATTCCA--CTTCGTTCGAGTAAACCTTTGA 1746 | | ||||| ||| ||||| ||||||||||| ||| | || || ||||| || || Sbjct 836 AATTCGGAGGGACATCATCGATGACGTTATA--CCATGCATCATTTGAGTACGTTTTGGA 779 Query 1747 GTTGAAGTCCAGGTGTCCACTCAGATAATTATGTGGGCCTAAGGCACGAGCCCACATCGT 1806 || || |||| ||| | | || || ||||||||||| | ||||||||| || Sbjct 778 ATTAAAATCCATAAATCCCATTATGTAGTTGTGTGGGCCTAATGAACGAGCCCATGCTGT 719 Query 1807 CTTGCCTGTTCTTGA 1821 || ||| ||||||| Sbjct 718 TTTCCCTATTCTTGA 704 >seq77518 Length=14724 Score = 111 bits (122), Expect = 3e-21 Identities = 177/254 (70%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 1565 CCTGGATTGCAGAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTCCCGTAC 1624 || |||||||| || ||||| |||| ||||| |||||||||||||||| || ||||| Sbjct 2400 CCAGGATTGCAAAGTACGATACATGGAATCCCGCCTTTAATTTGAACTGATTTTTCGTAC 2341 Query 1625 TTGCAATTTGACTGCCAGTCTTTTTGGGCCCCAAGGAGCTCTTTCCAGTGCTTCAACTTT 1684 || ||||||||| |||| ||| || || | || || || | ||||| || Sbjct 2340 TTTGCATTTGACTGTCAGTTGCGTTGTGCTCCTACGAACTGTTGATAATGCTTTTTAATT 2281 Query 1685 AAGTATTGCGGAGAGACGTCATCAATGACGTTATATTCCACTTCGTTCGAGTAAACCTTT 1744 || || |||| ||| ||||||||||||||||| | | ||||||||||| || Sbjct 2280 AAATAAGCTGGAGGGACATCATCAATGACGTTATACCACGCGTCGTTCGAGTATGTTTTC 2221 Query 1745 GAGTTGAAGTCCAGGTGTCCACTCAGATAATTATGTGGGCCTAAGGCACGAGCCCACATC 1804 | || || |||| || | | |||||||||||| || || ||| ||||| | Sbjct 2220 AAATTCAAATCCATAAAGCCCATTATATAATTATGTGGACCCAACTAACGTGCCCAAACT 2161 Query 1805 GTCTTGCCTGTTCT 1818 || || || |||| Sbjct 2160 GTTTTACCGATTCT 2147 >seq5493 Length=32325 Score = 107 bits (118), Expect = 3e-20 Identities = 145/197 (74%), Gaps = 15/197 (8%) Strand=Plus/Minus Query 1531 TTTGTTCAGGAAAT-CTTTATAGCTGGCACCCTCACC------TGGATTGCAGAGCACGA 1583 |||||||| ||||| |||||||| | | || || ||||||||| | ||| | Sbjct 31600 TTTGTTCAAGAAATGCTTTATAG---GAATATTCTCCGGTGCATGGATTGCACATCACAA 31544 Query 1584 TTGATGGGATCCCTCCTTTAATTTGAACTGGCTTCCCGTACTTGCAATTTGACTGCCAGT 1643 | ||| ||| || | ||||||||||||||| || |||||||| |||||| ||||||| Sbjct 31543 TACATGTGATTCCACTTTTAATTTGAACTGGTTTACCGTACTTCACATTTGATTGCCAGT 31484 Query 1644 CTTTTTGGGCCCCAAGGAGCTCTTTCCAGTGCTTCAACTTTAAG-TATTGCGGAGAGACG 1702 | ||| | || ||| ||||||||||| ||||| || || ||| ||| || ||| Sbjct 31483 TGTATTGAGACCTAAGTAGCTCTTTCCA--GCTTC--TTTGCAGATATGTCGGTGATACG 31428 Query 1703 TCATCAATGACGTTATA 1719 |||||||||| ||| || Sbjct 31427 TCATCAATGATGTTGTA 31411 >seq1010 Length=204159 Score = 105 bits (116), Expect = 1e-19 Identities = 194/281 (69%), Gaps = 5/281 (2%) Strand=Plus/Minus Query 1565 CCTGGATTGCAGAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTCCCGTAC 1624 ||| |||||||||||||||| || |||| | ||||||||| |||||| || |||||| Sbjct 40918 CCTAGATTGCAGAGCACGATACATAGGATTCTCCCTTTAATTAAAACTGGTTTACCGTAC 40859 Query 1625 TTGCAATTTGACTGCCAGTCTTTTTGGGCCCCAAGGAGCTCTTTCCAGTGCTTCAACTT- 1683 || |||||| ||||| | | ||| ||| || |||||||||||| || || || Sbjct 40858 TTAGCATTTGATTGCCAATTGTACTGGACCCTAATGAGCTCTTTCCAATGATTTTTTTTG 40799 Query 1684 TAAGTATTGCGGAGAGACGTCATCAATGACGTTATATTCCA--CTTCGTTCGAGTAAACC 1741 || || |||| |||||||| || || ||||| ||| | | ||||| | Sbjct 40798 CAAATAGGATAGAGACACGTCATCTATAACATTATA--CCATGCATTATTCGAAAATGAT 40741 Query 1742 TTTGAGTTGAAGTCCAGGTGTCCACTCAGATAATTATGTGGGCCTAAGGCACGAGCCCAC 1801 ||||| || || || | | || | | || |||||||||||||| | || |||| Sbjct 40740 TTTGAATTAAAATCTATGAAGCCCATTATGTAGTTATGTGGGCCTAAAGATCGTTCCCAT 40681 Query 1802 ATCGTCTTGCCTGTTCTTGAATCACCCTCAACTATGAGACT 1842 || ||||| || |||| | ||| || | |||| |||| Sbjct 40680 ATTGTCTTTCCAATTCTAGTTGGACCTTCTAATATGTGACT 40640 Score = 98.7 bits (108), Expect = 2e-17 Identities = 193/282 (68%), Gaps = 10/282 (4%) Strand=Plus/Plus Query 1565 CCTGGATTGCAGAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTCCCGTAC 1624 |||||||||||||||||||| ||||||| | |||||||||||||| | || |||||| Sbjct 36484 CCTGGATTGCAGAGCACGATACATGGGATTTCCTCTTTAATTTGAACTAGTTTACCGTAC 36543 Query 1625 TTGCAATTTGACTGCCAGTCTTTTTGGGCCCCAAGGAGCTCTTTCCAGTGCTTCAACTTT 1684 ||| || ||| ||||| | | | ||||| || ||||||||||| | || ||| Sbjct 36544 TTGACATGTGATTGCCAATTGTGCTAGGCCCTAATCAGCTCTTTCCAATTTTT----TTT 36599 Query 1685 --AAGTATTGCGGAGAGACGTCATCAATGACGTTATATTCCA--CTTCGTTCGAGTAAAC 1740 || || |||| || ||||| |||| ||||| ||| | | |||| | Sbjct 36600 GCAAATAGGATCGAGACACATCATCTATGAAATTATA--CCATGCATTAATCGAAAATGA 36657 Query 1741 CTTTGAGTTGAAGTCCAGGTGTCCACTCAGATAATTATGTGGGCCTAAGGCACGAGCCCA 1800 || || || || |||| | || | | || ||| |||||||||| | || ||||| Sbjct 36658 TTTCGAATTAAAATCCATGAAGCCCATTATGTAGTTACGTGGGCCTAAAGATCGTGCCCA 36717 Query 1801 CATCGTCTTGCCTGTTCTTGAATCACCCTCAACTATGAGACT 1842 || ||||| || |||| | || || | ||||||||| Sbjct 36718 TATTGTCTTCCCAATTCTAGCTGGGCCTTCTAATATGAGACT 36759 >seq54129 Length=2260 Score = 104 bits (114), Expect = 4e-19 Identities = 177/257 (69%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 1565 CCTGGATTGCAGAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTCCCGTAC 1624 || |||||||| || ||||| ||| ||||| ||||||||||||| ||| || |||||| Sbjct 2257 CCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAATTGGTTTTCCGTAC 2198 Query 1625 TTGCAATTTGACTGCCAGTCTTTTTGGGCCCCAAGGAGCTCTTTCCAGTGCTTCAACTTT 1684 || ||| | ||| |||| | || || || | || || || | |||||| || Sbjct 2197 TTTGCATTGGCCTGTCAGTTGTGCTGTGCGCCTACGAACTGTTGGTAATGCTTCTTAATT 2138 Query 1685 AAGTATTGCGGAGAGACGTCATCAATGACGTTATATTCCACTTCGTTCGAGTAAACCTTT 1744 || || | ||||| ||| || || ||||||||||| || || || ||||| || Sbjct 2137 AAATAATTCGGAGGGACATCGTCGATGACGTTATACCATACATCATTTGAGTATGTTTTG 2078 Query 1745 GAGTTGAAGTCCAGGTGTCCACTCAGATAATTATGTGGGCCTAAGGCACGAGCCCACATC 1804 || || || | || ||| | | || || ||| ||| ||| | ||||||||| Sbjct 2077 GAATTAAAATTCATAAATCCCATTATGTAGTTGTGTTGGCATAATGAACGAGCCCATGCT 2018 Query 1805 GTCTTGCCTGTTCTTGA 1821 || || ||| ||||||| Sbjct 2017 GTTTTTCCTATTCTTGA 2001 >seq22495 Length=567 Score = 104 bits (114), Expect = 4e-19 Identities = 164/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 1565 CCTGGATTGCAGAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTCCCGTAC 1624 || |||||||| || ||||| | | ||||| | ||||||||||||||| || |||||| Sbjct 367 CCAGGATTGCAAAGTACGATACTTAGAATCCCGCATTTAATTTGAACTGGTTTTCCGTAC 308 Query 1625 TTGCAATTTGACTGCCAGTCTTTTTGGGCCCCAAGGAGCTCTTTCCAGTGCTTCAACTTT 1684 || ||| | |||||||| || || || | || || || || |||||| || Sbjct 307 TTTGCATTGGCCTGCCAGTTGCGCTGTGCGCCTACGAACTGTTGACAATGCTTCTTAATT 248 Query 1685 AAGTATTGCGGAGAGACGTCATCAATGACGTTATATTCCA--CTTCGTTCGAGTAAACCT 1742 || || | ||||| || |||||| ||||||||||| ||| | || || ||||| | Sbjct 247 AAATAATTCGGAGGGATGTCATCGATGACGTTATA--CCATGCATCATTTGAGTACGTTT 190 Query 1743 TTGAGTTGAAGTCCAGGTGTCCACTCAGATAATTATGTGGGCCTAAGGCACGA 1795 | || || || |||| ||| | | || || ||||||||||| | |||| Sbjct 189 TGGAATTAAAATCCAAAAATCCTATTATGTAGTTGTGTGGGCCTAATGAACGA 137 >seq815 Length=151552 Score = 93.3 bits (102), Expect = 7e-16 Identities = 177/259 (68%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 1565 CCTGGATTGCAGAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTCCCGTAC 1624 || |||||||| || || || ||| ||||| |||||||||||| | || || ||||| Sbjct 85421 CCAGGATTGCAAAGTACAATACTTGGAATCCCGCCTTTAATTTGACCGGGTTTTTCGTAC 85362 Query 1625 TTGCAATTTGACTGCCAGTCTTTTTGGGCCCCAAGGAGCTCTTTCCAGTGCTTCAACTTT 1684 || ||| | || ||||| || || || | || || || | | |||| | || Sbjct 85361 TTTGCATTGGCCTTCCAGTTGCGCTGTGCGCCTACGAACTATTGATAATACTTCTAAATT 85302 Query 1685 AAGTATTGCGGAGAGACGTCATCAATGACGTTATATTCCA--CTTCGTTCGAGTAAACCT 1742 || || | | |||||||||| || ||||||||||| ||| | || || ||||| | Sbjct 85301 AAATAATTCAGAGAGACGTCGTCGATGACGTTATA--CCATGCATCATTTGAGTACGTTT 85244 Query 1743 TTGAGTTGAAGTCCAGGTGTCCACTCAGATAATTATGTGGGCCTAAGGCACGAGCCCACA 1802 | || || || |||| ||| | | || || |||| |||||| ||||||||| Sbjct 85243 TGGAATTAAAATCCATAAATCCCATTATGTAGTTGTGTGTGCCTAATAAACGAGCCCATG 85184 Query 1803 TCGTCTTGCCTGTTCTTGA 1821 | | || ||| ||||||| Sbjct 85183 TTATTTTCCCTATTCTTGA 85165 >seq20728 Length=3653 Score = 86.0 bits (94), Expect = 1e-13 Identities = 160/234 (68%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 1588 TGGGATCCCTCCTTTAATTTGAACTGGCTTCCCGTACTTGCAATTTGACTGCCAGTCTTT 1647 ||| ||||| ||||||||||||| ||| || |||||||| ||| | ||||| || Sbjct 1441 TGGAATCCCCCCTTTAATTTGAAATGGTTTTCCGTACTTTGCATTGGCCTGCC-GTTGCG 1499 Query 1648 TTGGGCCCCAAGGAGCTCTTTCCAGTGCTTCAACTTTAAGTATTGCGGAGAGACGTCATC 1707 || || || | || || || | ||||| |||| || | ||||| ||||||||| Sbjct 1500 CTGTGCGCCTACGAACTGTTGATAATGCTTTTTAATTAAATAATTCGGAGGGACGTCATC 1559 Query 1708 AATGACGTTATATTCCACTTCGTTCGAGTAAACCTTTGAGTTGAAGTCCAGGTGTCCACT 1767 |||||||||||| | || || ||||| || || || || || | || | Sbjct 1560 GATGACGTTATATCATGCATCATTTGAGTACGTTTTCGAATTAAAATCTATAAATCTCAT 1619 Query 1768 CAGATAATTATGTGGGCCTAAGGCACGAGCCCACATCGTCTTGCCTGTTCTTGA 1821 | || || |||||| |||| | ||||||||| || || ||| ||||||| Sbjct 1620 TATGTAGTTGTGTGGGACTAATGAACGAGCCCATGCTGTTTTCCCTATTCTTGA 1673 >seq953 Length=224861 Score = 86.0 bits (94), Expect = 1e-13 Identities = 179/261 (69%), Gaps = 8/261 (3%) Strand=Plus/Plus Query 1565 CCTGGATTGCAGAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTCCCGTAC 1624 || |||||||| | ||||| ||| ||||| ||||||||||||| || || |||||| Sbjct 1843 CCAGGATTGCAAAATACGATACTTGGAATCCCGCCTTTAATTTGAATTGATTTTCCGTAC 1902 Query 1625 -TTGCAATTTGA-CTGCCAGTCTTTTTGGGCCCCAAGGAGCTCTTTCCAGTGCTTCAACT 1682 ||||| |||| |||||| | | || | || | || || || | | ||| Sbjct 1903 TTTGCA--TTGACCTGCCAATGTCGCTGTACGCCTACGAACTGTTGATAATACTTTTTAA 1960 Query 1683 TTAAGTATTGCGGAGAGACGTCATCAATGACGTTATATTCCA--CTTCGTTCGAGTAAAC 1740 |||| || | ||||| |||||| || || |||||||| ||| | || || ||||| Sbjct 1961 TTAAATAATTCGGAGGGACGTCGTCGATAACGTTATA--CCATGCATCATTTGAGTACGT 2018 Query 1741 CTTTGAGTTGAAGTCCAGGTGTCCACTCAGATAATTATGTGGGCCTAAGGCACGAGCCCA 1800 || || || || |||| || | | || || ||||||||||| | ||||||||| Sbjct 2019 TTTCGAATTAAAATCCATAAATCTCATTATGTAGTTGTGTGGGCCTAATGAACGAGCCCA 2078 Query 1801 CATCGTCTTGCCTGTTCTTGA 1821 || || ||| ||||||| Sbjct 2079 TGCTGTTTTCCCTATTCTTGA 2099 >seq490 Length=137872 Score = 82.4 bits (90), Expect = 1e-12 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 1570 ATTGCAGAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTCCCGTACTTGCA 1629 |||||| || || |||||||| || || ||||||||||| | |||||| | || || | Sbjct 70618 ATTGCATAGGACAATTGATGGTATTCCACCTTTAATTTGTATTGGCTTAGCATATTTTGA 70559 Query 1630 ATTTGACTGCCAGTCTTTTTGGGCCCCAAGGAGCTCTTTCCAGTGCTTCAACTTTAAGTA 1689 || | |||||| | | |||||||| ||||| |||| |||||| | | | Sbjct 70558 ATCAGCTTGCCAGCTATGCTTGGCCCCAATAAGCTCCCTCCAATGCTTCTTCCAGAGAGA 70499 Query 1690 TTGCGGAGAGACGTCATCAATGACGTTATA 1719 | |||| ||||||||| ||||||||||| Sbjct 70498 TGCTGGAGGGACGTCATCTATGACGTTATA 70469 >seq6801 Length=49729 Score = 78.8 bits (86), Expect = 2e-11 Identities = 63/76 (83%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 1568 GGATTGCAGAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTCCCGTACTTG 1627 ||| |||| || ||||| |||| ||||| ||||||||||||||||| || |||||||| Sbjct 47097 GGAGTGCAAAGTACGATACATGGAATCCCGCCTTTAATTTGAACTGGTTTGCCGTACTTT 47156 Query 1628 CAATTTGACTGCCAGT 1643 |||||||||| ||| Sbjct 47157 GCATTTGACTGCTAGT 47172 >seq3059 Length=182465 Score = 77.0 bits (84), Expect = 5e-11 Identities = 105/147 (71%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 1565 CCTGGATTGCAGAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTCCCGTAC 1624 || |||||||| || ||||| ||| ||||| ||||||||||||| ||| || ||||| Sbjct 20416 CCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAATTGGTTTTCCGTAA 20357 Query 1625 TTGCAATTTGACTGCCAGTCTTTTTGGGCCCCAAGGAGCTCTTTCCAGTGCTTCAACTTT 1684 || ||| | || ||||| || || || | || || || | |||||| || Sbjct 20356 TTTGCATTGGCCTACCAGTTGCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTAATT 20297 Query 1685 AAGTATTGCGGAGAGACGTCATCAATG 1711 || || | ||||| |||||| |||||| Sbjct 20296 AAATAATTCGGAGGGACGTCGTCAATG 20270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8283314265590