Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_016649.1 Length=2750 Score E Sequences producing significant alignments: (Bits) Value seq3283 129 1e-26 seq3439 123 4e-25 seq5745 105 1e-19 seq22495 102 1e-18 seq33 100 5e-18 seq77518 96.9 6e-17 seq1993 96.9 6e-17 seq953 93.3 7e-16 seq35612 87.8 3e-14 seq54129 86.0 1e-13 seq442 86.0 1e-13 seq20728 84.2 4e-13 seq30129 80.6 5e-12 seq4104 77.0 6e-11 seq3059 77.0 6e-11 >seq3283 Length=49157 Score = 129 bits (142), Expect = 1e-26 Identities = 185/255 (73%), Gaps = 12/255 (5%) Strand=Plus/Minus Query 1681 AGGACCAGGATTGCAGAGGAAGATTGTTGGTATTCCGCCTTTAATTTGAACTGGCTTCCC 1740 ||| ||||||||||| || | ||| |||| || |||||||||||||||||||| ||||| Sbjct 2284 AGGTCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTGGTTTCCC 2225 Query 1741 GTACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTTTAAAGTGTT---- 1796 |||||||| |||| ||||| | | || || || | ||||| || | | || | Sbjct 2224 GTACTTTGCATTGGCCTGCCAATTTCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTT 2165 Query 1797 --TGAGGAAGTGCGGATCAACGTCATCAATGACGTTATACCAAGCGTCATTACTGTACAC 1854 | | | | |||| ||||| || |||||||||||||| || ||||| |||| Sbjct 2164 AATTAAATAATTCGGAGGGACGTCGTCGATGACGTTATACCATGCATCATTTGAGTAC-G 2106 Query 1855 CTTTGGGCTT-AGATC--TAAATGCCCACATAAATAGTTATGTGGGCCTAAAGACCTAGC 1911 ||||| || | ||| ||||| |||| || ||||| ||||||||||| || | ||| Sbjct 2105 TTTTGGAATTAAAATCCATAAAT-CCCA-TTATGTAGTTGTGTGGGCCTAATGAACGAGC 2048 Query 1912 CCACATTGTTTTCCC 1926 ||| ||||||||| Sbjct 2047 CCATGCTGTTTTCCC 2033 >seq3439 Length=62978 Score = 123 bits (136), Expect = 4e-25 Identities = 184/255 (72%), Gaps = 12/255 (5%) Strand=Plus/Minus Query 1681 AGGACCAGGATTGCAGAGGAAGATTGTTGGTATTCCGCCTTTAATTTGAACTGGCTTCCC 1740 ||| ||| ||||||| || | ||| |||| || |||||||||||||||||||| || || Sbjct 964 AGGTCCAAGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTGGTTTTCC 905 Query 1741 GTACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTTTAAAGTGTT---- 1796 |||||||| ||||| ||||| | | || || || | ||||| || | | || | Sbjct 904 GTACTTTGCGTTGGCATGCCAATTTCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTT 845 Query 1797 --TGAGGAAGTGCGGATCAACGTCATCAATGACGTTATACCAAGCGTCATTACTGTACAC 1854 | | | | |||| || ||||| |||||||||||||| || ||||| |||| Sbjct 844 AATTAAATAATTCGGAGGGACATCATCGATGACGTTATACCATGCATCATTTGAGTAC-G 786 Query 1855 CTTTGGGCTT-AGATC--TAAATGCCCACATAAATAGTTATGTGGGCCTAAAGACCTAGC 1911 ||||| || | ||| ||||| |||| || ||||| ||||||||||| || | ||| Sbjct 785 TTTTGGAATTAAAATCCATAAAT-CCCA-TTATGTAGTTGTGTGGGCCTAATGAACGAGC 728 Query 1912 CCACATTGTTTTCCC 1926 ||| ||||||||| Sbjct 727 CCATGCTGTTTTCCC 713 >seq5745 Length=45059 Score = 105 bits (116), Expect = 1e-19 Identities = 177/249 (71%), Gaps = 8/249 (3%) Strand=Plus/Plus Query 1685 CCAGGATTGCAGAGGAAGATTGTTGGTATTCCGCCTTTAATTTGAACTGGCTTCCCGTAC 1744 ||||||||||| | | ||| ||| || || ||||||||||||||||| || |||||| Sbjct 43541 CCAGGATTGCAAATCACGATACATGGAATCCCACCTTTAATTTGAACTGGTTTGCCGTAC 43600 Query 1745 TTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTT--TAAAG-TGTTTGAGG 1801 |||| || || ||||| | | ||| || || ||||||| || ||| | | ||| | Sbjct 43601 TTTGCATTTGACTGCCAATTGCATTGTGCTCCTATGAACTGTTGATAATGTTTTTTAATT 43660 Query 1802 AAGT--GC-GGATCAACGTCATCAATGACGTTATACCAAGCGTCATTACTGTACACCTTT 1858 || | || ||| | ||||||||||||||||||||| ||||| || || || Sbjct 43661 AAATAAGCTGGAGGGATGTCATCAATGACGTTATACCATGCGTCGTTCGATTATGTTTTC 43720 Query 1859 GGGCTTAGATCTA-AATGCCCACATAAATAGTTATGTGGGCCTAAAGACCTAGCCCACAT 1917 | | | ||| | || ||||| || ||| |||||||| || || || | ||||| | Sbjct 43721 GAATTCAAATCCATAAAGCCCA-TTATATAATTATGTGGACCCAACGAACGTGCCCAAAC 43779 Query 1918 TGTTTTCCC 1926 |||||| || Sbjct 43780 TGTTTTACC 43788 >seq22495 Length=567 Score = 102 bits (112), Expect = 1e-18 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 1681 AGGACCAGGATTGCAGAGGAAGATTGTTGGTATTCCGCCTTTAATTTGAACTGGCTTCCC 1740 ||| ||||||||||| || | ||| || | || |||| ||||||||||||||| || || Sbjct 371 AGGTCCAGGATTGCAAAGTACGATACTTAGAATCCCGCATTTAATTTGAACTGGTTTTCC 312 Query 1741 GTACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTTTAAAGTGTT---- 1796 |||||||| |||| ||||||| | || || || | ||||| || | | || | Sbjct 311 GTACTTTGCATTGGCCTGCCAGTTGCGCTGTGCGCCTACGAACTGTTGACAATGCTTCTT 252 Query 1797 --TGAGGAAGTGCGGATCAACGTCATCAATGACGTTATACCAAGCGTCATTACTGTACAC 1854 | | | | |||| | |||||| |||||||||||||| || ||||| |||| Sbjct 251 AATTAAATAATTCGGAGGGATGTCATCGATGACGTTATACCATGCATCATTTGAGTAC-G 193 Query 1855 CTTTGGGCTT-AGATCTAAATGCCCACATAAATAGTTATGTGGGCCTAAAGA 1905 ||||| || | ||| ||| || || ||||| ||||||||||| || Sbjct 192 TTTTGGAATTAAAATCCAAAAATCCTATTATGTAGTTGTGTGGGCCTAATGA 141 >seq33 Length=454124 Score = 100 bits (110), Expect = 5e-18 Identities = 125/167 (75%), Gaps = 6/167 (4%) Strand=Plus/Minus Query 1685 CCAGGATTGCAGAGGAAGATTGTTGGTATTCCGCCTTTAATTTGAACTGGCTTCCCGTAC 1744 ||||||||||| || | ||| ||| || |||| ||||||||||||||| || |||||| Sbjct 403302 CCAGGATTGCAAAGCACGATACATGGAATCCCGCTTTTAATTTGAACTGGTTTTCCGTAC 403243 Query 1745 TTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTT--TAAAG-TGTTTGAGG 1801 |||| || || ||||||| | || | || | ||||| || ||| | | ||| | Sbjct 403242 TTTGCATTTGACTGCCAGTTGCACTGTACGCCTACGAACTGTTGATAATGATTTTTAATT 403183 Query 1802 AAGT--GC-GGATCAACGTCATCAATGACGTTATACCAAGCGTCATT 1845 || | || ||| ||||||||||||||||||||||| ||||| || Sbjct 403182 AAATAAGCTGGAGGGACGTCATCAATGACGTTATACCACGCGTCGTT 403136 >seq77518 Length=14724 Score = 96.9 bits (106), Expect = 6e-17 Identities = 175/249 (70%), Gaps = 8/249 (3%) Strand=Plus/Minus Query 1685 CCAGGATTGCAGAGGAAGATTGTTGGTATTCCGCCTTTAATTTGAACTGGCTTCCCGTAC 1744 ||||||||||| || | ||| ||| || ||||||||||||||||||| || ||||| Sbjct 2400 CCAGGATTGCAAAGTACGATACATGGAATCCCGCCTTTAATTTGAACTGATTTTTCGTAC 2341 Query 1745 TTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTT--TAAAG-TGTTTGAGG 1801 |||| || || || |||| | ||| || || | ||||| || ||| | | ||| | Sbjct 2340 TTTGCATTTGACTGTCAGTTGCGTTGTGCTCCTACGAACTGTTGATAATGCTTTTTAATT 2281 Query 1802 AAGT--GC-GGATCAACGTCATCAATGACGTTATACCAAGCGTCATTACTGTACACCTTT 1858 || | || ||| || |||||||||||||||||||| ||||| || ||| || Sbjct 2280 AAATAAGCTGGAGGGACATCATCAATGACGTTATACCACGCGTCGTTCGAGTATGTTTTC 2221 Query 1859 GGGCTTAGATCTA-AATGCCCACATAAATAGTTATGTGGGCCTAAAGACCTAGCCCACAT 1917 | | ||| | || ||||| || ||| |||||||| || || | | ||||| | Sbjct 2220 AAATTCAAATCCATAAAGCCCA-TTATATAATTATGTGGACCCAACTAACGTGCCCAAAC 2162 Query 1918 TGTTTTCCC 1926 |||||| || Sbjct 2161 TGTTTTACC 2153 >seq1993 Length=81530 Score = 96.9 bits (106), Expect = 6e-17 Identities = 122/163 (75%), Gaps = 6/163 (4%) Strand=Plus/Minus Query 1685 CCAGGATTGCAGAGGAAGATTGTTGGTATTCCGCCTTTAATTTGAACTGGCTTCCCGTAC 1744 ||||||||||| || | ||| ||| || ||| |||||||||||||||| || |||||| Sbjct 74403 CCAGGATTGCAAAGCACGATACATGGAATCCCGTCTTTAATTTGAACTGGTTTGCCGTAC 74344 Query 1745 TTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTT--TAAAG-TGTTTGAGG 1801 |||| || || ||||| | | ||| || | | ||||| || ||| | | ||| | Sbjct 74343 TTTGCATTTGACTGCCAATTGCGTTGTGCTCATACGAACTGTTGATAATGATTTTTAATT 74284 Query 1802 AAGT--GC-GGATCAACGTCATCAATGACGTTATACCAAGCGT 1841 || | || ||| ||||||||||||||||||||||| |||| Sbjct 74283 AAATAAGCTGGAGGGACGTCATCAATGACGTTATACCACGCGT 74241 >seq953 Length=224861 Score = 93.3 bits (102), Expect = 7e-16 Identities = 177/254 (70%), Gaps = 10/254 (4%) Strand=Plus/Plus Query 1681 AGGACCAGGATTGCAGAGGAAGATTGTTGGTATTCCGCCTTTAATTTGAACTGGCTTCCC 1740 ||| ||||||||||| | | ||| |||| || |||||||||||||||| || || || Sbjct 1839 AGGTCCAGGATTGCAAAATACGATACTTGGAATCCCGCCTTTAATTTGAATTGATTTTCC 1898 Query 1741 GTACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTT--TAA-AGTGTTT 1797 |||||||| ||| ||||| | | || | || | ||||| || ||| | | ||| Sbjct 1899 GTACTTTGCATTGACCTGCCAATGTCGCTGTACGCCTACGAACTGTTGATAATACTTTTT 1958 Query 1798 GAGGA---AGTGCGGATCAACGTCATCAATGACGTTATACCAAGCGTCATTACTGTACAC 1854 | | | | |||| ||||| || || ||||||||||| || ||||| |||| Sbjct 1959 AATTAAATAATTCGGAGGGACGTCGTCGATAACGTTATACCATGCATCATTTGAGTACGT 2018 Query 1855 CTTTGGGCTTAGATC--TAAATGCCCACATAAATAGTTATGTGGGCCTAAAGACCTAGCC 1912 || | | | ||| ||||| | || || ||||| ||||||||||| || | |||| Sbjct 2019 TTTCGAATTAAAATCCATAAAT-CTCA-TTATGTAGTTGTGTGGGCCTAATGAACGAGCC 2076 Query 1913 CACATTGTTTTCCC 1926 || ||||||||| Sbjct 2077 CATGCTGTTTTCCC 2090 >seq35612 Length=1588 Score = 87.8 bits (96), Expect = 3e-14 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 1681 AGGACCAGGATTGCAGAGGAAGATTGTTGGTATTCCGCCTTTAATTTGAACTGGCTTCCC 1740 ||| ||||||||||| || | ||| |||| || |||||||||||||||||||| || || Sbjct 1506 AGGTCCAGGATTGCAAAGTACGATACTTGGAATGCCGCCTTTAATTTGAACTGGTTTTCC 1565 Query 1741 GTACTTTGTGTTGGATTGCCA 1761 |||||||| ||||| ||||| Sbjct 1566 GTACTTTGCGTTGGCCTGCCA 1586 >seq54129 Length=2260 Score = 86.0 bits (94), Expect = 1e-13 Identities = 177/254 (70%), Gaps = 12/254 (5%) Strand=Plus/Minus Query 1682 GGACCAGGATTGCAGAGGAAGATTGTTGGTATTCCGCCTTTAATTTGAACTGGCTTCCCG 1741 || ||||||||||| || | ||| |||| || |||||||||||||||| ||| || ||| Sbjct 2260 GGTCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAATTGGTTTTCCG 2201 Query 1742 TACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTT--TAAAG--TGTT- 1796 ||||||| |||| || |||| || || || | ||||| || ||| | | || Sbjct 2200 TACTTTGCATTGGCCTGTCAGTTGTGCTGTGCGCCTACGAACTGTTGGTAATGCTTCTTA 2141 Query 1797 -TGAGGAAGTGCGGATCAACGTCATCAATGACGTTATACCAAGCGTCATTACTGTACACC 1855 | | | | |||| || || || |||||||||||||| | ||||| ||| Sbjct 2140 ATTAAATAATTCGGAGGGACATCGTCGATGACGTTATACCATACATCATTTGAGTA-TGT 2082 Query 1856 TTTGGGCTTAGA--TC-TAAATGCCCACATAAATAGTTATGTGGGCCTAAAGACCTAGCC 1912 ||||| ||| | || ||||| |||| || ||||| ||| ||| ||| || | |||| Sbjct 2081 TTTGGAATTAAAATTCATAAAT-CCCA-TTATGTAGTTGTGTTGGCATAATGAACGAGCC 2024 Query 1913 CACATTGTTTTCCC 1926 || |||||| || Sbjct 2023 CATGCTGTTTTTCC 2010 >seq442 Length=237535 Score = 86.0 bits (94), Expect = 1e-13 Identities = 178/256 (70%), Gaps = 12/256 (5%) Strand=Plus/Plus Query 1679 TTAGGACCAGGATTGCAGAGGAAGATTGTTGGTATTCCGCCTTTAATTTGAACTGGCTTC 1738 ||||| ||||||||||| || ||| |||| || |||||||||||||||||| || Sbjct 22775 TTAGGTCCAGGATTGCAAAGTTCGATACTTGGAATCTCGCCTTTAATTTGAACTGATTTT 22834 Query 1739 CCGTACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTT--TAAAG-TGT 1795 |||||||||| |||| ||| ||| | ||| || || | ||||| || ||| | | | Sbjct 22835 CCGTACTTTGCATTGGCCTGCTAGTGTCGTTGTGCGCCTACGAACTGTTAATAATGCTTT 22894 Query 1796 TTGAGGA---AGTGCGGATCAACGTCATCAATGACGTTATACCAAGCGTCATTACTGTAC 1852 || | | | | || | ||||| || || |||||||||| || ||||| |||| Sbjct 22895 TTAATTAAATAATTCGAAGGGACGTC-TCGATAACGTTATACC-TGCATCATTTGAGTAC 22952 Query 1853 ACCTTTGGGCTTAGATC--TAAATGCCCACATAAATAGTTATGTGGGCCTAAAGACCTAG 1910 || | | ||| ||||| | || || ||||| ||||||||||| || | || Sbjct 22953 GTTTTCAAATTAAAATCAATAAAT-CTCA-TTATGTAGTTGTGTGGGCCTAATGAACGAG 23010 Query 1911 CCCACATTGTTTTCCC 1926 | || ||||||||| Sbjct 23011 CTCATGCTGTTTTCCC 23026 >seq20728 Length=3653 Score = 84.2 bits (92), Expect = 4e-13 Identities = 159/227 (70%), Gaps = 9/227 (4%) Strand=Plus/Plus Query 1707 TTGGTATTCCGCCTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTGGATTGCCAGTCCC 1766 |||| || || ||||||||||||| ||| || |||||||||| |||| |||| || | Sbjct 1440 TTGGAATCCCCCCTTTAATTTGAAATGGTTTTCCGTACTTTGCATTGGCCTGCC-GTTGC 1498 Query 1767 TTTGGGCCCCCATGAACTCTT--TAAAG-TGTTTGAGGA---AGTGCGGATCAACGTCAT 1820 || || || | ||||| || ||| | | ||| | | | | |||| ||||||| Sbjct 1499 GCTGTGCGCCTACGAACTGTTGATAATGCTTTTTAATTAAATAATTCGGAGGGACGTCAT 1558 Query 1821 CAATGACGTTATACCAAGCGTCATTACTGTACACCTTTGGGCTTAGATCTA-AATGCCCA 1879 | ||||||||||| || || ||||| |||| || | | | ||||| || | || Sbjct 1559 CGATGACGTTATATCATGCATCATTTGAGTACGTTTTCGAATTAAAATCTATAAATCTCA 1618 Query 1880 CATAAATAGTTATGTGGGCCTAAAGACCTAGCCCACATTGTTTTCCC 1926 || ||||| |||||| |||| || | |||||| ||||||||| Sbjct 1619 -TTATGTAGTTGTGTGGGACTAATGAACGAGCCCATGCTGTTTTCCC 1664 >seq30129 Length=3650 Score = 80.6 bits (88), Expect = 5e-12 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 1681 AGGACCAGGATTGCAGAGGAAGATTGTTGGTATTCCGCCTTTAATTTGAACTGGCTTCCC 1740 ||| ||||||||||| || | ||| |||| || |||||||||||||||||| | || || Sbjct 2370 AGGTCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTCGTTTTCC 2429 Query 1741 GTACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTT 1787 |||||||| |||| ||||| | | || || || | ||||| || Sbjct 2430 GTACTTTGCATTGGCCTGCCAATTTCGCTGTGCGCCTACGAACTGTT 2476 >seq4104 Length=64936 Score = 77.0 bits (84), Expect = 6e-11 Identities = 57/67 (85%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 1682 GGACCAGGATTGCAGAGGAAGATTGTTGGTATTCCGCCTTTAATTTGAACTGGCTTCCCG 1741 || ||||||||||| || | ||| |||| || |||||||||||||||||||| || ||| Sbjct 20830 GGTCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTGGTTTTCCG 20771 Query 1742 TACTTTG 1748 ||||||| Sbjct 20770 TACTTTG 20764 >seq3059 Length=182465 Score = 77.0 bits (84), Expect = 6e-11 Identities = 81/107 (76%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 1681 AGGACCAGGATTGCAGAGGAAGATTGTTGGTATTCCGCCTTTAATTTGAACTGGCTTCCC 1740 ||| ||||||||||| || | ||| |||| || |||||||||||||||| ||| || || Sbjct 20420 AGGTCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAATTGGTTTTCC 20361 Query 1741 GTACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTT 1787 ||| |||| |||| | ||||| | || || || | ||||| || Sbjct 20360 GTAATTTGCATTGGCCTACCAGTTGCGCTGTGCGCCTACGAACTGTT 20314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8682933826840