Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_023034.1 Length=2760 Score E Sequences producing significant alignments: (Bits) Value seq3283 118 2e-23 seq22495 102 1e-18 seq3439 102 1e-18 seq77518 100 5e-18 seq5745 98.7 2e-17 seq33 96.9 6e-17 seq1993 93.3 7e-16 seq54129 91.5 3e-15 seq4104 91.5 3e-15 seq442 89.7 9e-15 seq30129 84.2 4e-13 seq3059 84.2 4e-13 seq35612 82.4 1e-12 seq80468 78.8 2e-11 seq815 78.8 2e-11 seq6801 77.0 6e-11 seq953 77.0 6e-11 >seq3283 Length=49157 Score = 118 bits (130), Expect = 2e-23 Identities = 147/199 (74%), Gaps = 8/199 (4%) Strand=Plus/Minus Query 1667 ATCCAAGAACTCTTTATAAC-TTGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAA 1725 |||||||||| |||||| |||| | ||||| |||||||| || | |||| | |||| Sbjct 2311 ATCCAAGAACGTTTTATAGGATTGA-TCAGGTCCAGGATTGCAAAGTACGATACTTGGAA 2253 Query 1726 TTCCGCCTTTAATTTGAACTGGCTTCCCGTATTTTGTATTTGATTGCCAGTCCCTTTGGG 1785 | |||||||||||||||||||| |||||||| |||| ||| | ||||| | | || | Sbjct 2252 TCCCGCCTTTAATTTGAACTGGTTTCCCGTACTTTGCATTGGCCTGCCAATTTCGCTGTG 2193 Query 1786 CCCCCATGAATTCTTTAAAGTGCT------TTAGGTAGTGGGGATCGACGTCATCAATGA 1839 | || | ||| | || | | |||| ||| || | ||| |||||| || |||| Sbjct 2192 CGCCTACGAACTGTTGATAATGCTTCTTAATTAAATAATTCGGAGGGACGTCGTCGATGA 2133 Query 1840 CGTTATACCAGACATCATT 1858 |||||||||| ||||||| Sbjct 2132 CGTTATACCATGCATCATT 2114 >seq22495 Length=567 Score = 102 bits (112), Expect = 1e-18 Identities = 141/198 (71%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 1667 ATCCAAGAACTCTTTATAACTTGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAAT 1726 ||| ||||| |||||| | | | ||||| |||||||| || | |||| | |||| Sbjct 398 ATCTAAGAATGTTTTATAGGATAAATCAGGTCCAGGATTGCAAAGTACGATACTTAGAAT 339 Query 1727 TCCGCCTTTAATTTGAACTGGCTTCCCGTATTTTGTATTTGATTGCCAGTCCCTTTGGGC 1786 |||| ||||||||||||||| || ||||| |||| ||| | ||||||| | || || Sbjct 338 CCCGCATTTAATTTGAACTGGTTTTCCGTACTTTGCATTGGCCTGCCAGTTGCGCTGTGC 279 Query 1787 CCCCATGAATTCTTTAAAGTGCT------TTAGGTAGTGGGGATCGACGTCATCAATGAC 1840 || | ||| | || | | |||| ||| || | ||| || |||||| ||||| Sbjct 278 GCCTACGAACTGTTGACAATGCTTCTTAATTAAATAATTCGGAGGGATGTCATCGATGAC 219 Query 1841 GTTATACCAGACATCATT 1858 ||||||||| ||||||| Sbjct 218 GTTATACCATGCATCATT 201 >seq3439 Length=62978 Score = 102 bits (112), Expect = 1e-18 Identities = 141/198 (71%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 1667 ATCCAAGAACTCTTTATAACTTGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAAT 1726 ||| |||||| |||||| | | | ||||| ||||||| || | |||| | ||||| Sbjct 991 ATCTAAGAACGTTTTATAGGATAATTCAGGTCCAAGATTGCAAAGTACGATACTTGGAAT 932 Query 1727 TCCGCCTTTAATTTGAACTGGCTTCCCGTATTTTGTATTTGATTGCCAGTCCCTTTGGGC 1786 |||||||||||||||||||| || ||||| |||| || | ||||| | | || || Sbjct 931 CCCGCCTTTAATTTGAACTGGTTTTCCGTACTTTGCGTTGGCATGCCAATTTCGCTGTGC 872 Query 1787 CCCCATGAATTCTTTAAAGTGCT------TTAGGTAGTGGGGATCGACGTCATCAATGAC 1840 || | ||| | || | | |||| ||| || | ||| ||| ||||| ||||| Sbjct 871 GCCTACGAACTGTTGATAATGCTTCTTAATTAAATAATTCGGAGGGACATCATCGATGAC 812 Query 1841 GTTATACCAGACATCATT 1858 ||||||||| ||||||| Sbjct 811 GTTATACCATGCATCATT 794 >seq77518 Length=14724 Score = 100 bits (110), Expect = 5e-18 Identities = 166/237 (70%), Gaps = 11/237 (5%) Strand=Plus/Minus Query 1623 GCATTCTTTAAAGCCCA-GTTTTTAAGTGCGAAATTCTTTTCTTCATCCAAGAACTCTTT 1681 ||||| | ||||| ||| | |||| | | ||| || | || ||||||||| |||| Sbjct 2478 GCATTTTGTAAAGTCCACGATTTTCAATTTGAATTTGAAT-CTAAATCCAAGAATGCTTT 2420 Query 1682 ATAACTTGAGTTGGGTCCT---GGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAAT 1738 |||| | | | || || |||||||| || | |||| ||||| ||||||||||| Sbjct 2419 ATAAGATAAATCTGGACCCCCAGGATTGCAAAGTACGATACATGGAATCCCGCCTTTAAT 2360 Query 1739 TTGAACTGGCTTCCCGTATTTTGTATTTGATTGCCAGTCCCTTTGGGCCCCCATGAATTC 1798 |||||||| || |||| |||| |||||| || |||| | ||| || || | ||| | Sbjct 2359 TTGAACTGATTTTTCGTACTTTGCATTTGACTGTCAGTTGCGTTGTGCTCCTACGAACTG 2300 Query 1799 TTTAAAGTGCT------TTAGGTAGTGGGGATCGACGTCATCAATGACGTTATACCA 1849 || | | |||| ||| || ||| ||| |||||||||||||||||||| Sbjct 2299 TTGATAATGCTTTTTAATTAAATAAGCTGGAGGGACATCATCAATGACGTTATACCA 2243 >seq5745 Length=45059 Score = 98.7 bits (108), Expect = 2e-17 Identities = 137/192 (71%), Gaps = 9/192 (5%) Strand=Plus/Plus Query 1667 ATCCAAGAACTCTTTATAACTTGAGTTGGGTCCT---GGATTGCAGAGGAAGATAGTGGG 1723 ||| |||||| |||||||| | | | || || |||||||| | | |||| || Sbjct 43507 ATCTAAGAACGCTTTATAAGATAAATCTGGACCCCCAGGATTGCAAATCACGATACATGG 43566 Query 1724 AATTCCGCCTTTAATTTGAACTGGCTTCCCGTATTTTGTATTTGATTGCCAGTCCCTTTG 1783 ||| || ||||||||||||||||| || ||||| |||| |||||| ||||| | | ||| Sbjct 43567 AATCCCACCTTTAATTTGAACTGGTTTGCCGTACTTTGCATTTGACTGCCAATTGCATTG 43626 Query 1784 GGCCCCCATGAATTCTTTAAAGTGCT------TTAGGTAGTGGGGATCGACGTCATCAAT 1837 || || ||||| | || | | || | ||| || ||| || ||||||||| Sbjct 43627 TGCTCCTATGAACTGTTGATAATGTTTTTTAATTAAATAAGCTGGAGGGATGTCATCAAT 43686 Query 1838 GACGTTATACCA 1849 |||||||||||| Sbjct 43687 GACGTTATACCA 43698 >seq33 Length=454124 Score = 96.9 bits (106), Expect = 6e-17 Identities = 165/236 (70%), Gaps = 10/236 (4%) Strand=Plus/Minus Query 1623 GCATTCTTTAAAGCCCA-GTTTTTAAGTGCGAAATTCTTTTCTTCATCCAAGAACTCTTT 1681 ||||||| ||||| ||| | ||| | | ||| || | || ||| |||||| |||| Sbjct 403379 GCATTCTGTAAAGTCCACGATTTCCAATTTGAATTTGAAT-CTATATCGAAGAACGCTTT 403321 Query 1682 ATAACTTGAGTTGGGTCCT--GGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATT 1739 |||| | | || || |||||||| || | |||| ||||| |||| ||||||| Sbjct 403320 ATAAGACAACTCTGGACCCCAGGATTGCAAAGCACGATACATGGAATCCCGCTTTTAATT 403261 Query 1740 TGAACTGGCTTCCCGTATTTTGTATTTGATTGCCAGTCCCTTTGGGCCCCCATGAATTCT 1799 |||||||| || ||||| |||| |||||| ||||||| | || | || | ||| | | Sbjct 403260 TGAACTGGTTTTCCGTACTTTGCATTTGACTGCCAGTTGCACTGTACGCCTACGAACTGT 403201 Query 1800 TTAAAGTGCT------TTAGGTAGTGGGGATCGACGTCATCAATGACGTTATACCA 1849 | | | || | ||| || ||| |||||||||||||||||||||||| Sbjct 403200 TGATAATGATTTTTAATTAAATAAGCTGGAGGGACGTCATCAATGACGTTATACCA 403145 >seq1993 Length=81530 Score = 93.3 bits (102), Expect = 7e-16 Identities = 115/158 (73%), Gaps = 6/158 (4%) Strand=Plus/Minus Query 1698 CCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAACTGGCTTCCCGTAT 1757 || |||||||| || | |||| ||||| ||| |||||||||||||||| || ||||| Sbjct 74403 CCAGGATTGCAAAGCACGATACATGGAATCCCGTCTTTAATTTGAACTGGTTTGCCGTAC 74344 Query 1758 TTTGTATTTGATTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCT------TT 1811 |||| |||||| ||||| | | ||| || | | ||| | || | | || | || Sbjct 74343 TTTGCATTTGACTGCCAATTGCGTTGTGCTCATACGAACTGTTGATAATGATTTTTAATT 74284 Query 1812 AGGTAGTGGGGATCGACGTCATCAATGACGTTATACCA 1849 | || ||| |||||||||||||||||||||||| Sbjct 74283 AAATAAGCTGGAGGGACGTCATCAATGACGTTATACCA 74246 >seq54129 Length=2260 Score = 91.5 bits (100), Expect = 3e-15 Identities = 122/170 (72%), Gaps = 6/170 (4%) Strand=Plus/Minus Query 1695 GGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAACTGGCTTCCCG 1754 ||||| |||||||| || | |||| | ||||| |||||||||||||||| ||| || ||| Sbjct 2260 GGTCCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAATTGGTTTTCCG 2201 Query 1755 TATTTTGTATTTGATTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCT----- 1809 || |||| ||| | || |||| || || || | ||| | || | |||| Sbjct 2200 TACTTTGCATTGGCCTGTCAGTTGTGCTGTGCGCCTACGAACTGTTGGTAATGCTTCTTA 2141 Query 1810 -TTAGGTAGTGGGGATCGACGTCATCAATGACGTTATACCAGACATCATT 1858 ||| || | ||| ||| || || |||||||||||||| |||||||| Sbjct 2140 ATTAAATAATTCGGAGGGACATCGTCGATGACGTTATACCATACATCATT 2091 >seq4104 Length=64936 Score = 91.5 bits (100), Expect = 3e-15 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 1667 ATCCAAGAACTCTTTATAACTTGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAAT 1726 |||||||||| |||||| | | | |||||| |||||||| || | |||| | ||||| Sbjct 20858 ATCCAAGAACGTTTTATAGGATAAATCGGGTCCAGGATTGCAAAGTACGATACTTGGAAT 20799 Query 1727 TCCGCCTTTAATTTGAACTGGCTTCCCGTATTTTGTAT 1764 |||||||||||||||||||| || ||||| |||| || Sbjct 20798 CCCGCCTTTAATTTGAACTGGTTTTCCGTACTTTGCAT 20761 >seq442 Length=237535 Score = 89.7 bits (98), Expect = 9e-15 Identities = 140/198 (71%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 1667 ATCCAAGAACTCTTTATAACTTGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAAT 1726 ||||||||| |||||| | | || ||||| |||||||| || |||| | ||||| Sbjct 22750 ATCCAAGAATGTTTTATAGGATAAATTAGGTCCAGGATTGCAAAGTTCGATACTTGGAAT 22809 Query 1727 TCCGCCTTTAATTTGAACTGGCTTCCCGTATTTTGTATTTGATTGCCAGTCCCTTTGGGC 1786 |||||||||||||||||| || ||||| |||| ||| | ||| ||| | ||| || Sbjct 22810 CTCGCCTTTAATTTGAACTGATTTTCCGTACTTTGCATTGGCCTGCTAGTGTCGTTGTGC 22869 Query 1787 CCCCATGAATTCTTTAAAGTGCT------TTAGGTAGTGGGGATCGACGTCATCAATGAC 1840 || | ||| | || | | |||| ||| || | | | |||||| || || || Sbjct 22870 GCCTACGAACTGTTAATAATGCTTTTTAATTAAATAATTCGAAGGGACGTC-TCGATAAC 22928 Query 1841 GTTATACCAGACATCATT 1858 |||||||| | ||||||| Sbjct 22929 GTTATACCTG-CATCATT 22945 >seq30129 Length=3650 Score = 84.2 bits (92), Expect = 4e-13 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 1667 ATCCAAGAACTCTTTATAACTTGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAAT 1726 |||||||||| ||| || | | | ||||| |||||||| || | |||| | ||||| Sbjct 2343 ATCCAAGAACGTTTTTTAGGATAAATCAGGTCCAGGATTGCAAAGTACGATACTTGGAAT 2402 Query 1727 TCCGCCTTTAATTTGAACTGGCTTCCCGTATTTTGTATTTGATTGCCAGTCCCTTTGGGC 1786 |||||||||||||||||| | || ||||| |||| ||| | ||||| | | || || Sbjct 2403 CCCGCCTTTAATTTGAACTCGTTTTCCGTACTTTGCATTGGCCTGCCAATTTCGCTGTGC 2462 Query 1787 CCCCATGAATTCTTTAAAGTGCTT 1810 || | ||| | || | | ||||| Sbjct 2463 GCCTACGAACTGTTGATAATGCTT 2486 >seq3059 Length=182465 Score = 84.2 bits (92), Expect = 4e-13 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 1667 ATCCAAGAACTCTTTATAACTTGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAAT 1726 |||||||||| ||||| | | | ||||| |||||||| || | |||| | ||||| Sbjct 20447 ATCCAAGAACGTTTTATCGGATAAATCAGGTCCAGGATTGCAAAGTACGATACTTGGAAT 20388 Query 1727 TCCGCCTTTAATTTGAACTGGCTTCCCGTATTTTGTATTTGATTGCCAGTCCCTTTGGGC 1786 |||||||||||||||| ||| || ||||| |||| ||| | | ||||| | || || Sbjct 20387 CCCGCCTTTAATTTGAATTGGTTTTCCGTAATTTGCATTGGCCTACCAGTTGCGCTGTGC 20328 Query 1787 CCCCATGAATTCTTTAAAGTGCTT 1810 || | ||| | || | | ||||| Sbjct 20327 GCCTACGAACTGTTGATAATGCTT 20304 >seq35612 Length=1588 Score = 82.4 bits (90), Expect = 1e-12 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 1667 ATCCAAGAACTCTTTATAACTTGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAAT 1726 ||||||||| |||||| | | | ||||| |||||||| || | |||| | ||||| Sbjct 1479 ATCCAAGAATGTTTTATAGGATAAATCAGGTCCAGGATTGCAAAGTACGATACTTGGAAT 1538 Query 1727 TCCGCCTTTAATTTGAACTGGCTTCCCGTATTTTGTATTTGATTGCCA 1774 |||||||||||||||||||| || ||||| |||| || | ||||| Sbjct 1539 GCCGCCTTTAATTTGAACTGGTTTTCCGTACTTTGCGTTGGCCTGCCA 1586 >seq80468 Length=4946 Score = 78.8 bits (86), Expect = 2e-11 Identities = 138/200 (69%), Gaps = 11/200 (6%) Strand=Plus/Plus Query 1667 ATCCAAGAACTCTTTATAACTTGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAAT 1726 || |||||| |||||| | | | ||||| ||||||| || | |||| | ||||| Sbjct 4238 ATTCAAGAATGTTTTATAGGATAAATCAGGTCCAAGATTGCAAAGTACGATACTTGGAAT 4297 Query 1727 TCCGCCTTTAATTTGAACTGGCTTCCCGTATTTTGTATTTGATTGCCA--GTCCCTTTGG 1784 |||||||||||| ||||| || || ||||| |||||||| | | ||| || | || Sbjct 4298 TCCGCCTTTAATCTGAACAGGTTTTCCGTACTTTGTATTGGCCTACCATTGTGC---TGT 4354 Query 1785 GCCCCCATGAATTCTTTAAAGTGCT------TTAGGTAGTGGGGATCGACGTCATCAATG 1838 || || | ||| | || | | |||| ||| || | | | |||||| | ||| Sbjct 4355 GCGCCTACGAACTGTTGATAATGCTTCTTAATTAAATAATTTGAAGGGACGTCGTTGATG 4414 Query 1839 ACGTTATACCAGACATCATT 1858 ||||||||||| ||| ||| Sbjct 4415 ACGTTATACCATGCATAATT 4434 >seq815 Length=151552 Score = 78.8 bits (86), Expect = 2e-11 Identities = 119/170 (70%), Gaps = 6/170 (4%) Strand=Plus/Minus Query 1695 GGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAACTGGCTTCCCG 1754 ||||| |||||||| || | ||| | ||||| ||||||||||||||| | || || || Sbjct 85424 GGTCCAGGATTGCAAAGTACAATACTTGGAATCCCGCCTTTAATTTGACCGGGTTTTTCG 85365 Query 1755 TATTTTGTATTTGATTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCT----- 1809 || |||| ||| | | ||||| | || || || | ||| | || | | | || Sbjct 85364 TACTTTGCATTGGCCTTCCAGTTGCGCTGTGCGCCTACGAACTATTGATAATACTTCTAA 85305 Query 1810 -TTAGGTAGTGGGGATCGACGTCATCAATGACGTTATACCAGACATCATT 1858 ||| || | || |||||| || |||||||||||||| ||||||| Sbjct 85304 ATTAAATAATTCAGAGAGACGTCGTCGATGACGTTATACCATGCATCATT 85255 >seq6801 Length=49729 Score = 77.0 bits (84), Expect = 6e-11 Identities = 85/113 (75%), Gaps = 3/113 (3%) Strand=Plus/Plus Query 1667 ATCCAAGAACTCTTTATAACTTGAGTTGGGTCCT---GGATTGCAGAGGAAGATAGTGGG 1723 |||||||||| ||||||| | | || || ||| |||| || | |||| || Sbjct 47060 ATCCAAGAACGCTTTATAGGACAAATCTGGACCCCTAGGAGTGCAAAGTACGATACATGG 47119 Query 1724 AATTCCGCCTTTAATTTGAACTGGCTTCCCGTATTTTGTATTTGATTGCCAGT 1776 ||| |||||||||||||||||||| || ||||| |||| |||||| ||| ||| Sbjct 47120 AATCCCGCCTTTAATTTGAACTGGTTTGCCGTACTTTGCATTTGACTGCTAGT 47172 >seq953 Length=224861 Score = 77.0 bits (84), Expect = 6e-11 Identities = 164/243 (67%), Gaps = 8/243 (3%) Strand=Plus/Plus Query 1623 GCATTCTTTAAAGCCCA-GTTTTTAAGTGCGAAATTCTTTTCTTCATCCAAGAACTCTTT 1681 ||||| | ||||| ||| ||||| | | ||| || ||| ||| ||||| ||| Sbjct 1768 GCATTTTGTAAAGTCCAAGTTTTCCAATATGAA-TTGGAATCTAAATCTAAGAATGTTTT 1826 Query 1682 ATAACTTGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTG 1741 ||| | | | ||||| |||||||| | | |||| | ||||| |||||||||||||| Sbjct 1827 ATAGGATAAATCAGGTCCAGGATTGCAAAATACGATACTTGGAATCCCGCCTTTAATTTG 1886 Query 1742 AACTGGCTTCCCGTATTTTGTATTTGATTGCCAGTCCCTTTGGGCCCCCATGAATTCTTT 1801 || || || ||||| |||| ||| ||||| | | || | || | ||| | || Sbjct 1887 AATTGATTTTCCGTACTTTGCATTGACCTGCCAATGTCGCTGTACGCCTACGAACTGTTG 1946 Query 1802 AAAGTGCT------TTAGGTAGTGGGGATCGACGTCATCAATGACGTTATACCAGACATC 1855 | | | || ||| || | ||| |||||| || || ||||||||||| |||| Sbjct 1947 ATAATACTTTTTAATTAAATAATTCGGAGGGACGTCGTCGATAACGTTATACCATGCATC 2006 Query 1856 ATT 1858 ||| Sbjct 2007 ATT 2009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8714903391740