Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_031452.1 Length=2636 Score E Sequences producing significant alignments: (Bits) Value seq33 80.6 4e-12 >seq33 Length=454124 Score = 80.6 bits (88), Expect = 4e-12 Identities = 70/84 (83%), Gaps = 6/84 (7%) Strand=Plus/Minus Query 1561 CCAGGATTGCAAAGCACGATTGATGGGATGGATCCCGCCTTTAATTTGAACCGGCTTTCC 1620 |||||||||||||||||||| |||| || ||||| |||||||||||| || ||||| Sbjct 403302 CCAGGATTGCAAAGCACGATACATGGAAT----CCCGCTTTTAATTTGAACTGGTTTTCC 403247 Query 1621 GTA-TTTGCAGTTCGATTGCCAGT 1643 ||| |||||| || || ||||||| Sbjct 403246 GTACTTTGCA-TTTGACTGCCAGT 403224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8318480786980