Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fraxinus_20excelsior_20[genbank_20GCA_5F900149125.1_202017-01-20] 89,515 sequences; 867,455,155 total letters Query= NC_031458.1 Length=2609 Score E Sequences producing significant alignments: (Bits) Value seq33 123 4e-25 seq5493 102 1e-18 seq4295 102 1e-18 seq1010 102 1e-18 seq77518 100 5e-18 seq3283 98.7 2e-17 seq5745 96.9 6e-17 seq1993 96.9 6e-17 seq490 93.3 7e-16 seq22495 91.5 2e-15 seq3439 89.7 8e-15 seq54129 87.8 3e-14 seq6801 80.6 4e-12 seq20728 77.0 5e-11 >seq33 Length=454124 Score = 123 bits (136), Expect = 4e-25 Identities = 171/237 (72%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 1549 CCAGGATTGCAAAGCACGATTGATGGGATTCCCCCTTTAATTTGAACTGGCTTTCCGTA- 1607 |||||||||||||||||||| |||| || || | ||||||||||||||| |||||||| Sbjct 403302 CCAGGATTGCAAAGCACGATACATGGAATCCCGCTTTTAATTTGAACTGGTTTTCCGTAC 403243 Query 1608 TTTGCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTT 1667 |||||| ||||||||||||| ||| | || | | | || | || ||| | Sbjct 403242 TTTGCA-TTTGACTGCCAGTTGCACTGTACGCCTACGAACTGTTGATAATGATTTTTAAT 403184 Query 1668 TAGATATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTCGAATAGACTCT 1727 || ||| || | |||||||||||||||||||||| | | |||||||| || ||| Sbjct 403183 TAAATAAGCTGGAGGGACGTCATCAATGACGTTATACCACGCGTCGTTCGAGTATGTTCT 403124 Query 1728 TGGGTTGAAGTCTAGATGTCCACTAAGGTAATTATGTGGGCCTAGGGCACGAGCCCA 1784 | || || || | | || | | |||||||||||| || | | ||| ||||| Sbjct 403123 CGAATTCAAATCCATAAAGCCCATTATGTAATTATGTGGACCCAACGAACGTGCCCA 403067 >seq5493 Length=32325 Score = 102 bits (112), Expect = 1e-18 Identities = 117/154 (76%), Gaps = 5/154 (3%) Strand=Plus/Minus Query 1552 GGATTGCAAAGCACGATTGATGGGATTCCCCCTTTAATTTGAACTGGCTTTCCGTATTTG 1611 |||||||| | ||| || ||| |||||| | ||||||||||||||| || ||||| || Sbjct 31559 GGATTGCACATCACAATACATGTGATTCCACTTTTAATTTGAACTGGTTTACCGTACTTC 31500 Query 1612 CAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAG-TGCTTTAGCTTTAG 1670 |||||| ||||||| | || | || || || ||||||||| | |||| || || Sbjct 31499 ACATTTGATTGCCAGTTGTATTGAGACCTAAGTAGCTCTTTCCAGCTTCTTT-GC---AG 31444 Query 1671 ATATTGCGGTGCGACGTCATCAATGACGTTATAC 1704 |||| ||||| ||||||||||||| ||| ||| Sbjct 31443 ATATGTCGGTGATACGTCATCAATGATGTTGTAC 31410 >seq4295 Length=67413 Score = 102 bits (112), Expect = 1e-18 Identities = 170/243 (70%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 1552 GGATTGCAAAGCACGATTGATGGGATTCCCCCTTTAATTTGAACTGGCTTTCCGTATTTG 1611 |||||| | ||||||||| ||||||||||||||||||||||| |||| || ||||| ||| Sbjct 46843 GGATTGTAGAGCACGATTCATGGGATTCCCCCTTTAATTTGATCTGGTTTACCGTACTTG 46784 Query 1612 CAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTTTAGA 1671 |||||| | ||| | | ||||||| | | || ||||| || | ||| || | | Sbjct 46783 GCATTTGAGTTCCAATTGTACTGGGCCACAATGAGCTCTTTTCAATATTTTTTCTGCAAA 46724 Query 1672 TATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTCGAATAGACTCTTGGG 1731 || | | |||||||| || ||||| ||| | | |||||| | | | | Sbjct 46723 TAGGATAGAGATACGTCATCTATAACGTTGTACCATGCATTATTCGAAAATGATTTCGAA 46664 Query 1732 TTGAAGTCTA-GATGTCCACTAAGGTAATTATGTGGGCCTAGGGCACGAGCCCACATCGT 1790 || || || | || | ||| | | ||| |||||||||| || | || ||||| || || Sbjct 46663 TTAAAATCCATGAAGCCCA-TTATGTAGTTATGTGGGCATAAAGACCGTGCCCATATTGT 46605 Query 1791 CTT 1793 ||| Sbjct 46604 CTT 46602 >seq1010 Length=204159 Score = 102 bits (112), Expect = 1e-18 Identities = 191/277 (69%), Gaps = 3/277 (1%) Strand=Plus/Minus Query 1553 GATTGCAAAGCACGATTGATGGGATTCCCCCTTTAATTTGAACTGGCTTTCCGTATTTGC 1612 ||||||| |||||||| || |||||| |||||||||| |||||| || ||||| || Sbjct 40914 GATTGCAGAGCACGATACATAGGATTCTCCCTTTAATTAAAACTGGTTTACCGTACTTAG 40855 Query 1613 AATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTTT-AGA 1671 |||||| ||||| | | |||| ||| | || |||||||| || ||| || | | Sbjct 40854 CATTTGATTGCCAATTGTACTGGACCCTAATGAGCTCTTTCCAATGATTTTTTTTGCAAA 40795 Query 1672 TATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTCGAATAGACTCTTGGG 1731 || | | |||||||| || || |||||| | | |||||| | | ||| Sbjct 40794 TAGGATAGAGACACGTCATCTATAACATTATACCATGCATTATTCGAAAATGATTTTGAA 40735 Query 1732 TTGAAGTCTA-GATGTCCACTAAGGTAATTATGTGGGCCTAGGGCACGAGCCCACATCGT 1790 || || |||| || | ||| || | || ||||||||||||| | || |||| || || Sbjct 40734 TTAAAATCTATGAAGCCCATTATG-TAGTTATGTGGGCCTAAAGATCGTTCCCATATTGT 40676 Query 1791 CTTCCCTGTCCTCGAGTCACCTTCTACTATGATACTC 1827 ||| || | || | |||||||| |||| |||| Sbjct 40675 CTTTCCAATTCTAGTTGGACCTTCTAATATGTGACTC 40639 Score = 89.7 bits (98), Expect = 8e-15 Identities = 190/280 (68%), Gaps = 4/280 (1%) Strand=Plus/Plus Query 1549 CCAGGATTGCAAAGCACGATTGATGGGATTCCCCCTTTAATTTGAACTGGCTTTCCGTAT 1608 || |||||||| |||||||| |||||||| || |||||||||||||| | || ||||| Sbjct 36484 CCTGGATTGCAGAGCACGATACATGGGATTTCCTCTTTAATTTGAACTAGTTTACCGTAC 36543 Query 1609 TTGCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTTT 1668 ||| || ||| ||||| | | || ||||| | || |||||||| | ||| | Sbjct 36544 TTGACATGTGATTGCCAATTGTGCTAGGCCCTAATCAGCTCTTTCCAAT--TTTTTTTGC 36601 Query 1669 AGATATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTCGAATAGACTCTT 1728 | ||| | | || ||||| |||| |||||| | | ||||| | | | Sbjct 36602 AAATAGGATCGAGACACATCATCTATGAAATTATACCATGCATTAATCGAAAATGATTTC 36661 Query 1729 GGGTTGAAGTCTA-GATGTCCACTAAGGTAATTATGTGGGCCTAGGGCACGAGCCCACAT 1787 | || || || | || | ||| | | ||| ||| ||||||||| | || ||||| || Sbjct 36662 GAATTAAAATCCATGAAGCCCA-TTATGTAGTTACGTGGGCCTAAAGATCGTGCCCATAT 36720 Query 1788 CGTCTTCCCTGTCCTCGAGTCACCTTCTACTATGATACTC 1827 |||||||| | || | ||||||| ||||| |||| Sbjct 36721 TGTCTTCCCAATTCTAGCTGGGCCTTCTAATATGAGACTC 36760 >seq77518 Length=14724 Score = 100 bits (110), Expect = 5e-18 Identities = 128/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 1549 CCAGGATTGCAAAGCACGATTGATGGGATTCCCCCTTTAATTTGAACTGGCTTTCCGTA- 1607 |||||||||||||| ||||| |||| || || |||||||||||||||| ||| |||| Sbjct 2400 CCAGGATTGCAAAGTACGATACATGGAATCCCGCCTTTAATTTGAACTGATTTTTCGTAC 2341 Query 1608 TTTGCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTT 1667 ||||| ||||||||| |||| || || || | | | || | |||||| | Sbjct 2340 TTTGC-ATTTGACTGTCAGTTGCGTTGTGCTCCTACGAACTGTTGATAATGCTTTTTAAT 2282 Query 1668 TAGATATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTCGAATA 1721 || ||| || | ||| |||||||||||||||||| | | |||||||| || Sbjct 2281 TAAATAAGCTGGAGGGACATCATCAATGACGTTATACCACGCGTCGTTCGAGTA 2228 >seq3283 Length=49157 Score = 98.7 bits (108), Expect = 2e-17 Identities = 192/281 (68%), Gaps = 2/281 (1%) Strand=Plus/Minus Query 1549 CCAGGATTGCAAAGCACGATTGATGGGATTCCCCCTTTAATTTGAACTGGCTTTCCGTA- 1607 |||||||||||||| ||||| ||| || || ||||||||||||||||| || ||||| Sbjct 2280 CCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTGGTTTCCCGTAC 2221 Query 1608 TTTGCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTT 1667 ||||| ||| | |||||| | ||| || || | | | || | ||||| | Sbjct 2220 TTTGC-ATTGGCCTGCCAATTTCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTAAT 2162 Query 1668 TAGATATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTCGAATAGACTCT 1727 || ||| | ||| | |||||| || |||||||||||| | || || || || | | Sbjct 2161 TAAATAATTCGGAGGGACGTCGTCGATGACGTTATACCATGCATCATTTGAGTACGTTTT 2102 Query 1728 TGGGTTGAAGTCTAGATGTCCACTAAGGTAATTATGTGGGCCTAGGGCACGAGCCCACAT 1787 | || || || | | ||| | | ||| || |||||||||| | ||||||||| Sbjct 2101 GGAATTAAAATCCATAAATCCCATTATGTAGTTGTGTGGGCCTAATGAACGAGCCCATGC 2042 Query 1788 CGTCTTCCCTGTCCTCGAGTCACCTTCTACTATGATACTCA 1828 || |||||| | || || ||||| | || || |||| Sbjct 2041 TGTTTTCCCTATTCTTGATGGGCCTTCAATAATAATGCTCA 2001 >seq5745 Length=45059 Score = 96.9 bits (106), Expect = 6e-17 Identities = 165/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 1549 CCAGGATTGCAAAGCACGATTGATGGGATTCCCCCTTTAATTTGAACTGGCTTTCCGTA- 1607 ||||||||||||| |||||| |||| || || ||||||||||||||||| || ||||| Sbjct 43541 CCAGGATTGCAAATCACGATACATGGAATCCCACCTTTAATTTGAACTGGTTTGCCGTAC 43600 Query 1608 TTTGCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTT 1667 ||||| |||||||||||| | || || || | | | || | || ||| | Sbjct 43601 TTTGC-ATTTGACTGCCAATTGCATTGTGCTCCTATGAACTGTTGATAATGTTTTTTAAT 43659 Query 1668 TAGATATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTCGAATAGACTCT 1727 || ||| || | || ||||||||||||||||||| | |||||||| || | | Sbjct 43660 TAAATAAGCTGGAGGGATGTCATCAATGACGTTATACCATGCGTCGTTCGATTATGTTTT 43719 Query 1728 TGGGTTGAAGTCTAGATGTCCACTAAGGTAATTATGTGGGCCTAGGGCACGAGCCCA 1784 | || || || | | || | | ||||||||||| || | | ||| ||||| Sbjct 43720 CGAATTCAAATCCATAAAGCCCATTATATAATTATGTGGACCCAACGAACGTGCCCA 43776 >seq1993 Length=81530 Score = 96.9 bits (106), Expect = 6e-17 Identities = 129/177 (73%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 1546 TCACCAGGATTGCAAAGCACGATTGATGGGATTCCCCCTTTAATTTGAACTGGCTTTCCG 1605 || |||||||||||||||||||| |||| || || |||||||||||||||| || ||| Sbjct 74406 TCCCCAGGATTGCAAAGCACGATACATGGAATCCCGTCTTTAATTTGAACTGGTTTGCCG 74347 Query 1606 TA-TTTGCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAG 1664 || |||||| ||||||||||| | || || | | | | || | || ||| Sbjct 74346 TACTTTGCA-TTTGACTGCCAATTGCGTTGTGCTCATACGAACTGTTGATAATGATTTTT 74288 Query 1665 CTTTAGATATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTCGAATA 1721 ||| ||| || | |||||||||||||||||||||| | | | |||||| || Sbjct 74287 AATTAAATAAGCTGGAGGGACGTCATCAATGACGTTATACCACGCGTTGTTCGATTA 74231 >seq490 Length=137872 Score = 93.3 bits (102), Expect = 7e-16 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 1554 ATTGCAAAGCACGATTGATGGGATTCCCCCTTTAATTTGAACTGGCTTTCCGTATTTGCA 1613 |||||| || || |||||||| ||||| ||||||||||| | |||||| | ||||| | Sbjct 70618 ATTGCATAGGACAATTGATGGTATTCCACCTTTAATTTGTATTGGCTTAGCATATTTTGA 70559 Query 1614 ATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTTTAGATA 1673 || | |||||| | || |||||| | ||| || |||| ||||| | ||| | Sbjct 70558 ATCAGCTTGCCAGCTATGCTTGGCCCCAATAAGCTCCCTCCAATGCTTCTTCCAGAGAGA 70499 Query 1674 TTGCGGTGCGACGTCATCAATGACGTTATAC 1704 | || | ||||||||| |||||||||||| Sbjct 70498 TGCTGGAGGGACGTCATCTATGACGTTATAC 70468 >seq22495 Length=567 Score = 91.5 bits (100), Expect = 2e-15 Identities = 116/157 (74%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 1549 CCAGGATTGCAAAGCACGATTGATGGGATTCCCCCTTTAATTTGAACTGGCTTTCCGTA- 1607 |||||||||||||| ||||| | | || || | ||||||||||||||| |||||||| Sbjct 367 CCAGGATTGCAAAGTACGATACTTAGAATCCCGCATTTAATTTGAACTGGTTTTCCGTAC 308 Query 1608 TTTGCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTT 1667 |||||| || | |||||||| ||| || || | | | || || ||||| | Sbjct 307 TTTGCA-TTGGCCTGCCAGTTGCGCTGTGCGCCTACGAACTGTTGACAATGCTTCTTAAT 249 Query 1668 TAGATATTGCGGTGCGACGTCATCAATGACGTTATAC 1704 || ||| | ||| | || |||||| |||||||||||| Sbjct 248 TAAATAATTCGGAGGGATGTCATCGATGACGTTATAC 212 >seq3439 Length=62978 Score = 89.7 bits (98), Expect = 8e-15 Identities = 190/281 (68%), Gaps = 2/281 (1%) Strand=Plus/Minus Query 1549 CCAGGATTGCAAAGCACGATTGATGGGATTCCCCCTTTAATTTGAACTGGCTTTCCGTA- 1607 ||| |||||||||| ||||| ||| || || ||||||||||||||||| |||||||| Sbjct 960 CCAAGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAACTGGTTTTCCGTAC 901 Query 1608 TTTGCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTT 1667 ||||| || | ||||| | ||| || || | | | || | ||||| | Sbjct 900 TTTGC-GTTGGCATGCCAATTTCGCTGTGCGCCTACGAACTGTTGATAATGCTTCTTAAT 842 Query 1668 TAGATATTGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTCGAATAGACTCT 1727 || ||| | ||| | ||| ||||| |||||||||||| | || || || || | | Sbjct 841 TAAATAATTCGGAGGGACATCATCGATGACGTTATACCATGCATCATTTGAGTACGTTTT 782 Query 1728 TGGGTTGAAGTCTAGATGTCCACTAAGGTAATTATGTGGGCCTAGGGCACGAGCCCACAT 1787 | || || || | | ||| | | ||| || |||||||||| | ||||||||| Sbjct 781 GGAATTAAAATCCATAAATCCCATTATGTAGTTGTGTGGGCCTAATGAACGAGCCCATGC 722 Query 1788 CGTCTTCCCTGTCCTCGAGTCACCTTCTACTATGATACTCA 1828 || |||||| | || || ||||| | || || |||| Sbjct 721 TGTTTTCCCTATTCTTGATGGGCCTTCAATAATAATGCTCA 681 >seq54129 Length=2260 Score = 87.8 bits (96), Expect = 3e-14 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 1549 CCAGGATTGCAAAGCACGATTGATGGGATTCCCCCTTTAATTTGAACTGGCTTTCCGTA- 1607 |||||||||||||| ||||| ||| || || ||||||||||||| ||| |||||||| Sbjct 2257 CCAGGATTGCAAAGTACGATACTTGGAATCCCGCCTTTAATTTGAATTGGTTTTCCGTAC 2198 Query 1608 TTTGCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTT 1667 ||||| ||| | ||| |||| | ||| || || | | | || | ||||| | Sbjct 2197 TTTGC-ATTGGCCTGTCAGTTGTGCTGTGCGCCTACGAACTGTTGGTAATGCTTCTTAAT 2139 Query 1668 TAGATATTGCGGTGCGACGTCATCAATGACGTTATAC 1704 || ||| | ||| | ||| || || |||||||||||| Sbjct 2138 TAAATAATTCGGAGGGACATCGTCGATGACGTTATAC 2102 >seq6801 Length=49729 Score = 80.6 bits (88), Expect = 4e-12 Identities = 66/78 (85%), Gaps = 2/78 (3%) Strand=Plus/Plus Query 1551 AGGATTGCAAAGCACGATTGATGGGATTCCCCCTTTAATTTGAACTGGCTTTCCGTA-TT 1609 |||| ||||||| ||||| |||| || || ||||||||||||||||| || ||||| || Sbjct 47096 AGGAGTGCAAAGTACGATACATGGAATCCCGCCTTTAATTTGAACTGGTTTGCCGTACTT 47155 Query 1610 TGCAATTTGACTGCCAGT 1627 ||| |||||||||| ||| Sbjct 47156 TGC-ATTTGACTGCTAGT 47172 >seq20728 Length=3653 Score = 77.0 bits (84), Expect = 5e-11 Identities = 174/258 (67%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 1572 TGGGATTCCCCCTTTAATTTGAACTGGCTTTCCGTA-TTTGCAATTTGACTGCCAGTCCT 1630 ||| || |||||||||||||||| ||| |||||||| ||||| ||| | ||||| || Sbjct 1441 TGGAATCCCCCCTTTAATTTGAAATGGTTTTCCGTACTTTGC-ATTGGCCTGCC-GTTGC 1498 Query 1631 TCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTTAGCTTTAGATATTGCGGTGCGACGTCAT 1690 ||| || || | | | || | |||||| ||| ||| | ||| | |||||||| Sbjct 1499 GCTGTGCGCCTACGAACTGTTGATAATGCTTTTTAATTAAATAATTCGGAGGGACGTCAT 1558 Query 1691 CAATGACGTTATACTCCACTTCGTTCGAATAGACTCTTGGGTTGAAGTCTAGATGTCCAC 1750 | ||||||||||| | || || || || | | | || || |||| | || Sbjct 1559 CGATGACGTTATATCATGCATCATTTGAGTACGTTTTCGAATTAAAATCTATAAATCTCA 1618 Query 1751 TAAGGTAATTATGTGGGCCTAGGGCACGAGCCCACATCGTCTTCCCTGTCCTCGAGTCAC 1810 | | ||| || |||||| ||| | ||||||||| || |||||| | || || | Sbjct 1619 TTATGTAGTTGTGTGGGACTAATGAACGAGCCCATGCTGTTTTCCCTATTCTTGATGGGC 1678 Query 1811 CTTCTACTATGATACTCA 1828 |||| | || || |||| Sbjct 1679 CTTCAATAATAATGCTCA 1696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8232162961750