Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helianthus_20annuus_20[genbank_20GCA_5F002127325.1_202017-05-12] 1,528 sequences; 3,027,844,945 total letters Query= NC_004613.1 Length=2748 Score E Sequences producing significant alignments: (Bits) Value seq16 111 3e-21 >seq16 Length=188620566 Score = 111 bits (122), Expect = 3e-21 Identities = 137/184 (74%), Gaps = 5/184 (3%) Strand=Plus/Minus Query 1753 TTGCTTTGCCAATCTCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGATAGTGGGGG 1812 |||||| |||| |||||||| || || | ||||| || |||| |||| | | || ||| Sbjct 2249300 TTGCTT-GCCAGTCTCTTTGTGCACCAAGTAATTCCTTCCAGTGTTTTAAACATTGTGGG 2249242 Query 1813 TCTACGTCATCAATGACGTTGTA--CCATGCATCATTACTGTACACCTTTGGACTCAAGT 1870 | |||| |||||| ||||| || ||| |||| ||| | | ||| | ||| |||||| Sbjct 2249241 TTAACGTTATCAATAACGTTATATTCCA--CATCGTTAGAGAAAACCGTAGGATTCAAGT 2249184 Query 1871 CAAGGTGCCCACACAAATAATTATGTGGGCCTAAAGACCTGGCCCACATTGTCTTTCCTG 1930 | | | |||| |||||||||||| || || || || ||||||||||||||||| | Sbjct 2249183 CTAAATAACCACTTAAATAATTATGTCTTCCCAATGATCTTGCCCACATTGTCTTTCCGG 2249124 Query 1931 TTCT 1934 |||| Sbjct 2249123 TTCT 2249120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8684659002272