Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helianthus_20annuus_20[genbank_20GCA_5F002127325.1_202017-05-12] 1,528 sequences; 3,027,844,945 total letters Query= NC_007339.1 Length=2736 Score E Sequences producing significant alignments: (Bits) Value seq16 77.0 6e-11 >seq16 Length=188620566 Score = 77.0 bits (84), Expect = 6e-11 Identities = 163/239 (68%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 1708 CTTTAATCATGACTGGCTTTCCGTACTT-CGTGTTGCTTTGCCAGTCTCTTTGGGCCCCC 1766 |||| ||| || || |||| |||||| | |||||| ||||||||||||| || || Sbjct 2249333 CTTTGATCTGAACCGGTTTTCTGTACTTGCACTTTGCTT-GCCAGTCTCTTTGTGCACCA 2249275 Query 1767 ATGAATTCTTTAAAATGCTTTAGATAGTGGGGATCAACGTCATCAATGACGTTGTA--CC 1824 | ||||| || | || |||| | | || || | ||||| |||||| ||||| || || Sbjct 2249274 AGTAATTCCTTCCAGTGTTTTAAACATTGTGGGTTAACGTTATCAATAACGTTATATTCC 2249215 Query 1825 AAGCATCATTATTGTATACTCTCGGGCTTAGATCTAGATGGCCGCACAAGTAATTGTGTG 1884 | |||| ||| | | || | || | | |||| || || | || ||||| ||| Sbjct 2249214 A--CATCGTTAGAGAAAACCGTAGGATTCAAGTCTAAATAACCACTTAAATAATTATGTC 2249157 Query 1885 GTCCTAACGAACGCGCCCACGCTGTTTTGCCCGTCCTACTATCACCCTCTAATACTATT 1943 ||| || || | |||||| ||| || || || || |||||| || | || |||| Sbjct 2249156 TTCCCAATGATCTTGCCCACATTGTCTTTCCGGTTCTTGAATCACCTTCAATTATTATT 2249098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8646259625696