Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helianthus_20annuus_20[genbank_20GCA_5F002127325.1_202017-05-12] 1,528 sequences; 3,027,844,945 total letters Query= NC_008267.1 Length=2762 Score E Sequences producing significant alignments: (Bits) Value seq13 80.6 5e-12 >seq13 Length=197258317 Score = 80.6 bits (88), Expect = 5e-12 Identities = 148/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 1805 TGGGCCCCCATAAACTCTTTAAAGTGCTTTAGGTAATGCGGATCGACGTCATCAATGACG 1864 || || || ||||||||||| ||||||| | ||| || || | |||||| |||| | Sbjct 89851285 TGAGCTCCAATAAACTCTTTCCAGTGCTTGAAGTATTGTGGTGGTATGTCATCGATGATG 89851344 Query 1865 TTATACCATGCGTCATTTGAGTAAACCCTAGGAT--TGAGATCTAGATGGCCGCACAAGT 1922 || || |||| |||||| | || | | |||| || | ||| || || | || Sbjct 89851345 TTGTAATCAACGTCGTTTGAGAAGACTTTTTCTTCTTGAGGTCCATATGACCACATACGT 89851404 Query 1923 AATTGTGCCTACCAAGCGATCTAGCCCACATGGTTTTACCTGTACGACTATCACCTTGTA 1982 | || || | || | ||||| |||||||| ||||||||||| | ||||| || || Sbjct 89851405 AGTTATGTTTTCCCAAAGATCTTGCCCACATTGTTTTACCTGTCCTGGAATCACTTTCTA 89851464 Query 1983 ACACCAGACTCTTTGGTCTTAATGGCCGCGCAGCGG 2018 | | ||||||||| | ||||||||||||| Sbjct 89851465 TGATTATTGACTTTGGTCTCATCGGCCGCGCAGCGG 89851500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8729458274944