Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helianthus_20annuus_20[genbank_20GCA_5F002127325.1_202017-05-12] 1,528 sequences; 3,027,844,945 total letters Query= NC_010713.1 Length=2767 Score E Sequences producing significant alignments: (Bits) Value seq16 165 1e-37 >seq16 Length=188620566 Score = 165 bits (182), Expect = 1e-37 Identities = 200/267 (75%), Gaps = 8/267 (3%) Strand=Plus/Minus Query 1712 CTTTAATTTGAACTGGCTTTCCGTATTTTGTA--TTGCTTTGCCAGTCTCTTTGGGCCCC 1769 |||| || ||||| || |||| ||| || | | |||||| ||||||||||||| || || Sbjct 2249333 CTTTGATCTGAACCGGTTTTCTGTACTT-GCACTTTGCTT-GCCAGTCTCTTTGTGCACC 2249276 Query 1770 CATGAATTCCTTAAAGTGCTTTAAATAGTGGGGGTCGACATCATCAATGACGTTATA--C 1827 | |||||||| |||| |||||| | || |||| || | |||||| |||||||| | Sbjct 2249275 AAGTAATTCCTTCCAGTGTTTTAAACATTGTGGGTTAACGTTATCAATAACGTTATATTC 2249216 Query 1828 CATGCGTCATTACTGTAAACCTTGGGACTCAAGTCTAGGTGACCACATAAATAATTATGT 1887 || | || ||| | ||||| | ||| ||||||||| | ||||| ||||||||||||| Sbjct 2249215 CA--CATCGTTAGAGAAAACCGTAGGATTCAAGTCTAAATAACCACTTAAATAATTATGT 2249158 Query 1888 GGTCCAAGTGATCTGGCCCACATTGTTTTCCCTGTTCGACTATCGCCCTCAAGAACAATT 1947 ||| | |||||| ||||||||||| || || |||| ||| || |||| | ||| Sbjct 2249157 CTTCCCAATGATCTTGCCCACATTGTCTTTCCGGTTCTTGAATCACCTTCAATTATTATT 2249098 Query 1948 GATTTAGGTCTTAATGGCCGCGCAGCG 1974 || | |||||| ||||| || | |||| Sbjct 2249097 GACTGAGGTCTCAATGGGCGTGAAGCG 2249071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8742253892640