Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helianthus_20annuus_20[genbank_20GCA_5F002127325.1_202017-05-12] 1,528 sequences; 3,027,844,945 total letters Query= NC_013019.1 Length=2774 Score E Sequences producing significant alignments: (Bits) Value seq11 77.0 6e-11 >seq11 Length=168460249 Score = 77.0 bits (84), Expect = 6e-11 Identities = 197/300 (66%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 1707 TCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAACTGGCTTTCCGTA 1766 |||||| ||||| || | ||| || || || || ||||| | || |||||| ||||| Sbjct 165527604 TCCTGGGTTGCATAGCATGATTGTTGGTATGCCTCCTTTGAAAAGACTTGGCTTGCCGTA 165527545 Query 1767 TTTCGTGTTGCTTTGCCAGTCCCTTTGGGCCCCGATGAATTCCTTAAAGTGCTTGAAATA 1826 ||| || ||||| | | ||| || || || || || || ||||| |||| || Sbjct 165527544 TTTGCAGTAAGACTGCCAATTTCGTTGAGCTCCAATAAACTCTTTCCAGTGCATGAAGTA 165527485 Query 1827 ATCCGGATCAACGTCATCAATGACGTTGTACCACGCATCATTATTGTAGACCTTAGGACT 1886 | || | |||||| |||| |||||| || | || | |||| || | Sbjct 165527484 TTGTGGTGGTATGTCATCGATGATGTTGTAGTCAGCGTTGTTTGAGAAGACTTTTTTGTT 165527425 Query 1887 AAGGTCAAAGTGACCACACAGGTAATTATGTGGACCCAAAGACCTAGCCCACGTGGTCTT 1946 |||| | |||||||| | ||| |||||| |||||||| || |||||| | || || Sbjct 165527424 GTGGTCCATATGACCACATATGTAGTTATGTCTTCCCAAAGATCTTGCCCACATTGTTTT 165527365 Query 1947 CCCCGTTCTACTATCACCCTCTGTGACAATACGCTTGGGTCTGAAAGTCCGCGCAGCGGC 2006 | || || || ||| | | ||| | ||| ||||| | | |||||||||||| Sbjct 165527364 GCTTGTCCTGGAATTACCTTTTATGATTGTTGACTTTGGTCTCATCGGCCGCGCAGCGGC 165527305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8764653518280