Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helianthus_20annuus_20[genbank_20GCA_5F002127325.1_202017-05-12] 1,528 sequences; 3,027,844,945 total letters Query= NC_014596.1 Length=2707 Score E Sequences producing significant alignments: (Bits) Value seq13 78.8 2e-11 >seq13 Length=197258317 Score = 78.8 bits (86), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 4/121 (3%) Strand=Plus/Plus Query 1818 AGGTCAAGGTGACCACATAAATAGTTATGTGGACCCAGAGACCTGGCCCACATGGTCTTC 1877 ||||| | |||||||||| ||||||||| |||| ||| || |||||||| || || Sbjct 89851383 AGGTCCATATGACCACATACGTAGTTATGTTTTCCCAAAGATCTTGCCCACATTGTTTTA 89851442 Query 1878 CCTGTTCTACTCTCACCCTCTATGACTATACTGACG--GGTCTCCAAGGCCGCGCAGCGG 1935 ||||| || |||| ||||||| ||| |||| |||||| ||||||||||||| Sbjct 89851443 CCTGTCCTGGAATCACTTTCTATGATTAT--TGACTTTGGTCTCATCGGCCGCGCAGCGG 89851500 Query 1936 C 1936 | Sbjct 89851501 C 89851501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8553461132304