Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helianthus_20annuus_20[genbank_20GCA_5F002127325.1_202017-05-12] 1,528 sequences; 3,027,844,945 total letters Query= NC_014745.1 Length=2764 Score E Sequences producing significant alignments: (Bits) Value seq13 82.4 1e-12 >seq13 Length=197258317 Score = 82.4 bits (90), Expect = 1e-12 Identities = 179/266 (67%), Gaps = 4/266 (2%) Strand=Plus/Plus Query 2344 CTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTATTTGGGGAGACCAGG 2403 ||||||||||| ||| |||| |||||| || | | ||| |||||||| ||| Sbjct 172134403 CTGGATTTAGCAGACTGTATGTATGGATGACAAATTTCAGACGTATTTGGGTGATTGAGG 172134462 Query 2404 TCGAATAGTCTCTGATTTTGGCACTTGAATTTCCCTTCGAATTGGAGAAGCACATGCAGA 2463 || || | ||| ||||||| || ||||||||| ||| | || | | ||||| ||| Sbjct 172134463 TCAAAGAATCTTGGATTTTGACATTTGAATTTCTTTTCCATCTGCATCAAAACATGAAGA 172134522 Query 2464 TGAGGTTGGCCATCCTCGTGAAGTTCTCTGCAAATCTTGATGTAT-TTCTTGTTTGATGC 2522 ||||| | | | || ||||| |||||| |||| || ||| ||| | |||| | | || Sbjct 172134523 TGAGGCTTGTCGTCTTCGTGCAGTTCTATGCAGATAGCGATATATATACTTGATCGCTGA 172134582 Query 2523 TGTACTTATTTG---CTGGAGTTGCTCTAGGGCTTCCTCTTTGCTTAGAGAACATTTTGG 2579 | | || | | | ||||| || || | |||||| || | | |||||||| Sbjct 172134583 AGGAATTGGTAGAACTTTCAGTTGTTCAAGATAATATTCTTTGGATACATAGCATTTTGG 172134642 Query 2580 GGAAGTTAGGAAAAAATTCTTTGCAT 2605 | | || | ||| | ||||| |||| Sbjct 172134643 GTATGTGATGAAGTAGTTCTTGGCAT 172134668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8732654053080